Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_12g0016530 | OGI:12051120 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr12:21030722-21033947 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatggtaatttagaatcttggctacatggtgacactcatgagcttacagaggaaaggtgcttgaatctcatggccagagtgactatacttcttgatgtggcctatgctttggattatcttcactgccatggcccttcacctgtcatacactgtgacatcaagtccagcaacgtgctcttggatgctgacatggtggcccatgttggagactttggtctcgctaggattcctgatgagcaaagttcagtactccaaccatcaacaaactcacttggattcagagggacaattggctatgctgctccaggttagcctgctgctactattattttatctagttatctttacaactataattgtggatcctgtgaacaatctatttttttctggattttccaatggcgcagaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga
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| CDS seq | atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatgaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga
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| Protein seq | MYYGVLCLLVVVCFSHTLVLHSQGSSNSTIDEVALFSFKSMLLNPSDSLASWNTSSHFCRSWHGVVCSRGHPKRVVRLQLSSLNLLGEISPFLGNLSFLRMLHLGDNHLTGQIPPELGHLSKLRVLNLSANSLIGSIPVTLGGCAQLTFLNLRNNRLHGEIPAEIGSLEKLTVLQLRNNNLSGQIPLSLGGLTVLGALYLTSNDLSGEIPSALGNLSNLWGLGLSDNMLSGAIPSSLGLLSRLSSLTIGFNNLSGEVPASIWNISSLTMLSIEETMLSGRMPPNAFSNLRQLQSLYIHHNLFDGSIPVSIANASSISVINLGHNFLHGVVPPEVGSLRNLERVVLAESSLEAKTVDDWKFMTALANCSRLQILDLGGNKFSGVLPDSVSNLSRSLIYLSVGQNRISGSIPRDIGNLINLQALVLSENSFTGSLPSSLSRLKNLRGLAVYNNNLSGSLSLTIGNFTQLIYLLLHMNAFSGTIPSTLGNLTELLQLHLGYNNFTGLIPKEIFSIVTLSEFLDVSHNNLEGSIPQEIGSLKNLVEFHAESNILSGEIPSTLGDCELLQNIYLQNNFLNGSIPSPLSHLKGLTTLDISNNNLSGTLPGSIADFRALKYLNLSFNKFVGEVPTVGIFSNDSSFSIQGNDKLCGGIQALHLPPCSLQLSKKKHKIPVIPITAATVATLLLLSSTYMLVACHKKRKAKIQSTSSMEGHPLISYSQLVRATNGFSTNNLLGSGAFGSVYKGELDGQSSENTNIVAVKVLKLQNHGALKSFISECEALRNLRHRNLVKIITACSSIDPTGNDFKAIVFEFMPNEYGAGNTMSMHGDIYSYGILVLETITGKRPIGSEFREGLSLREYVQLGLQDRVMDVVDMRLSLDLTDGLQTANDSSYKRKIECVVLLLKLGMSCSHELPSSRLPTGDIIKELLAIKESLSMEYRVR |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0016530 | OsPr106_12g0016530.01 | Chr12 | 21030722 | 21033947 | + | NAM | ||
| CDS seq | atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatgaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga
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| Protein seq | MYYGVLCLLVVVCFSHTLVLHSQGSSNSTIDEVALFSFKSMLLNPSDSLASWNTSSHFCRSWHGVVCSRGHPKRVVRLQLSSLNLLGEISPFLGNLSFLRMLHLGDNHLTGQIPPELGHLSKLRVLNLSANSLIGSIPVTLGGCAQLTFLNLRNNRLHGEIPAEIGSLEKLTVLQLRNNNLSGQIPLSLGGLTVLGALYLTSNDLSGEIPSALGNLSNLWGLGLSDNMLSGAIPSSLGLLSRLSSLTIGFNNLSGEVPASIWNISSLTMLSIEETMLSGRMPPNAFSNLRQLQSLYIHHNLFDGSIPVSIANASSISVINLGHNFLHGVVPPEVGSLRNLERVVLAESSLEAKTVDDWKFMTALANCSRLQILDLGGNKFSGVLPDSVSNLSRSLIYLSVGQNRISGSIPRDIGNLINLQALVLSENSFTGSLPSSLSRLKNLRGLAVYNNNLSGSLSLTIGNFTQLIYLLLHMNAFSGTIPSTLGNLTELLQLHLGYNNFTGLIPKEIFSIVTLSEFLDVSHNNLEGSIPQEIGSLKNLVEFHAESNILSGEIPSTLGDCELLQNIYLQNNFLNGSIPSPLSHLKGLTTLDISNNNLSGTLPGSIADFRALKYLNLSFNKFVGEVPTVGIFSNDSSFSIQGNDKLCGGIQALHLPPCSLQLSKKKHKIPVIPITAATVATLLLLSSTYMLVACHKKRKAKIQSTSSMEGHPLISYSQLVRATNGFSTNNLLGSGAFGSVYKGELDGQSSENTNIVAVKVLKLQNHGALKSFISECEALRNLRHRNLVKIITACSSIDPTGNDFKAIVFEFMPNEYGAGNTMSMHGDIYSYGILVLETITGKRPIGSEFREGLSLREYVQLGLQDRVMDVVDMRLSLDLTDGLQTANDSSYKRKIECVVLLLKLGMSCSHELPSSRLPTGDIIKELLAIKESLSMEYRVR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0221700 | SBH | 0.0 | 0.215994 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g42520 | SBH | 0.633536 | 0.625440 | 0.145438 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0221700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014090 | SBH | 0.146151 | 0.000000 | 1.201783 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0014260 | SBH | 0.050427 | 1.337043 | 0.442937 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017770 | SBH | 0.164332 | 9.540369 | 4.595458 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0013960 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0006400 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0300600 | RBH | 0 | 0 | 0.191692 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0013740 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0384800 | SBH | 1.9215695 | 4.197475 | 9.0018155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0013840 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0016920 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021540 | SBH | 1.003323 | 11.623171 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0021620 | SBH | 1.201175 | 0.0 | 2.811115 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0014110 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017720 | SBH | 0.042523 | 0.0 | 0.112282 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0013760 | SBH | 0.395411 | 1.700231 | 1.308676 |
