Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_12g0016530 OGI:12051120 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr12:21030722-21033947
Gene Symbol -
DNA seq

atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatggtaatttagaatcttggctacatggtgacactcatgagcttacagaggaaaggtgcttgaatctcatggccagagtgactatacttcttgatgtggcctatgctttggattatcttcactgccatggcccttcacctgtcatacactgtgacatcaagtccagcaacgtgctcttggatgctgacatggtggcccatgttggagactttggtctcgctaggattcctgatgagcaaagttcagtactccaaccatcaacaaactcacttggattcagagggacaattggctatgctgctccaggttagcctgctgctactattattttatctagttatctttacaactataattgtggatcctgtgaacaatctatttttttctggattttccaatggcgcagaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga

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CDS seq

atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatgaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga

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Protein seq

MYYGVLCLLVVVCFSHTLVLHSQGSSNSTIDEVALFSFKSMLLNPSDSLASWNTSSHFCRSWHGVVCSRGHPKRVVRLQLSSLNLLGEISPFLGNLSFLRMLHLGDNHLTGQIPPELGHLSKLRVLNLSANSLIGSIPVTLGGCAQLTFLNLRNNRLHGEIPAEIGSLEKLTVLQLRNNNLSGQIPLSLGGLTVLGALYLTSNDLSGEIPSALGNLSNLWGLGLSDNMLSGAIPSSLGLLSRLSSLTIGFNNLSGEVPASIWNISSLTMLSIEETMLSGRMPPNAFSNLRQLQSLYIHHNLFDGSIPVSIANASSISVINLGHNFLHGVVPPEVGSLRNLERVVLAESSLEAKTVDDWKFMTALANCSRLQILDLGGNKFSGVLPDSVSNLSRSLIYLSVGQNRISGSIPRDIGNLINLQALVLSENSFTGSLPSSLSRLKNLRGLAVYNNNLSGSLSLTIGNFTQLIYLLLHMNAFSGTIPSTLGNLTELLQLHLGYNNFTGLIPKEIFSIVTLSEFLDVSHNNLEGSIPQEIGSLKNLVEFHAESNILSGEIPSTLGDCELLQNIYLQNNFLNGSIPSPLSHLKGLTTLDISNNNLSGTLPGSIADFRALKYLNLSFNKFVGEVPTVGIFSNDSSFSIQGNDKLCGGIQALHLPPCSLQLSKKKHKIPVIPITAATVATLLLLSSTYMLVACHKKRKAKIQSTSSMEGHPLISYSQLVRATNGFSTNNLLGSGAFGSVYKGELDGQSSENTNIVAVKVLKLQNHGALKSFISECEALRNLRHRNLVKIITACSSIDPTGNDFKAIVFEFMPNEYGAGNTMSMHGDIYSYGILVLETITGKRPIGSEFREGLSLREYVQLGLQDRVMDVVDMRLSLDLTDGLQTANDSSYKRKIECVVLLLKLGMSCSHELPSSRLPTGDIIKELLAIKESLSMEYRVR

Function Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_12g0016530 OsPr106_12g0016530.01 Chr12 21030722 21033947 + NAM
CDS seq

atgtactatggagtgctctgcttgttagtggtggtgtgtttttcccatactcttgtgctccattcccagggtagcagcaattccacgatcgatgaggtagccctattctccttcaaatccatgctgctgaacccatctgattcgctggcttcatggaacacatccagccacttctgcagaagctggcatggagtcgtttgcagccgtggacaccccaagagggtagtgaggctacagctgagctctctcaacctgctgggagagatctctccgtttctaggtaacctgtcatttcttaggatgctccatcttggcgacaaccatctaacggggcagatacctccggagcttggtcatctgagcaagctccgggtgctgaatctcagcgcgaattccctcattggaagcatcccggtgacacttggaggatgtgcccagctcacatttctcaaccttcgcaataaccggctccatggtgagatcccagctgagattggcagcttagaaaagcttacagtcttgcaacttcgtaataacaatctgtcaggacagatccctctgtcgctgggaggcttgacagttcttggtgccttgtatttgacgagcaatgacttatctggtgagataccatctgctctaggcaacctctctaatctctggggtcttggactctctgataatatgctgtctggagctatcccttcatcacttggtctcttgtctaggttatcttcgcttaccattggcttcaacaatttaagtggtgaggtccctgcttccatttggaacatctcctctctcactatgctttccatcgaggagaccatgctaagtgggagaatgcctccaaatgcattcagtaatcttcgacagctgcaaagtttatacatccatcacaatcttttcgacggctctatccctgtctcgatagctaatgcttccagcatctcggtaattaacttgggtcataactttttgcacggtgttgttcctccagaggttggaagcttaaggaatcttgaaagggtggtgcttgcagagtctagtctagaagccaaaactgtcgatgattggaaatttatgacggcattggcgaattgctcgcggcttcaaattttggacttgggtggtaataagttcagtggagtccttcctgattcagtttcaaatctttctaggtcactgatatatctatcagttggacagaacagaatttcaggaagcatacctagagatatcggtaatctcattaacttgcaagctctagtacttagtgaaaattcctttacaggatctcttccctcttccttgagcaggcttaaaaacttgcgtggtttggctgtatataacaataatttaagtggatctctctcattgaccattggtaactttacacaactaatttatttgctcctccacatgaatgccttcagtggtacaataccaagcacacttggaaacctgacagagttgttgcaactacatcttggatacaacaactttacaggcctgattcccaaggaaatatttagcatcgtcacactttcagaatttttggatgtatcccataataacttggagggatctataccacaagaaatagggagtctcaaaaatcttgtcgaattccatgcagaatcaaacatattatccggtgaaatcccttcaacacttggtgactgtgaacttctccagaatatttatttgcaaaacaatttcctaaatggtagtattccatcacccttgagtcacttaaaaggtttaactactcttgacatctcaaacaacaatttgtcaggcacactaccgggttccattgcggattttagagcgcttaaatatctaaacctctcattcaataaatttgttggagaagtaccaacagttggtattttctcaaatgattcgtcattctccatccaagggaatgacaaactctgcggtggtatacaagctctacatttgcctccatgttctctacagttatcaaagaagaaacacaagattccagttattcctattactgctgctactgtggcaacattgctgctcctttcatcaacctacatgcttgttgcttgccacaagaaaagaaaagcaaaaattcaatcaacctcgtccatggaaggccaccccttgatctcctattcacagctggtaagagcaacgaatggtttctcgacaaacaatttgttgggctctggagcttttgggtctgtgtacaaaggagaattagatggtcagtctagtgaaaatacaaatattgttgctgtcaaggtactaaagcttcaaaatcatggggcactgaaaagtttcatatccgaatgcgaagcactacgaaacctacggcaccggaatcttgtgaagataataacggcttgctcaagcattgaccctacagggaatgacttcaaagcaattgtgtttgaattcatgcctaatgaatatggtgctggaaacacgatgtcaatgcatggagacatttacagttatggcatccttgtgttagaaacaataactgggaaaaggccaattggcagtgagttcagggaagggttgagccttcgtgaatatgttcagctgggtctgcaggacagagtgatggatgtggtcgacatgcggctctctttagacctcaccgatgggcttcagactgcaaatgattcttcatacaaaagaaagatcgaatgcgtcgttttacttctgaaacttggaatgtcctgctcacatgaattaccctcgagcaggttgccaactggggatatcataaaggagcttctggccattaaagaatctctctccatggaatacagagtgcgatga

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Protein seq

MYYGVLCLLVVVCFSHTLVLHSQGSSNSTIDEVALFSFKSMLLNPSDSLASWNTSSHFCRSWHGVVCSRGHPKRVVRLQLSSLNLLGEISPFLGNLSFLRMLHLGDNHLTGQIPPELGHLSKLRVLNLSANSLIGSIPVTLGGCAQLTFLNLRNNRLHGEIPAEIGSLEKLTVLQLRNNNLSGQIPLSLGGLTVLGALYLTSNDLSGEIPSALGNLSNLWGLGLSDNMLSGAIPSSLGLLSRLSSLTIGFNNLSGEVPASIWNISSLTMLSIEETMLSGRMPPNAFSNLRQLQSLYIHHNLFDGSIPVSIANASSISVINLGHNFLHGVVPPEVGSLRNLERVVLAESSLEAKTVDDWKFMTALANCSRLQILDLGGNKFSGVLPDSVSNLSRSLIYLSVGQNRISGSIPRDIGNLINLQALVLSENSFTGSLPSSLSRLKNLRGLAVYNNNLSGSLSLTIGNFTQLIYLLLHMNAFSGTIPSTLGNLTELLQLHLGYNNFTGLIPKEIFSIVTLSEFLDVSHNNLEGSIPQEIGSLKNLVEFHAESNILSGEIPSTLGDCELLQNIYLQNNFLNGSIPSPLSHLKGLTTLDISNNNLSGTLPGSIADFRALKYLNLSFNKFVGEVPTVGIFSNDSSFSIQGNDKLCGGIQALHLPPCSLQLSKKKHKIPVIPITAATVATLLLLSSTYMLVACHKKRKAKIQSTSSMEGHPLISYSQLVRATNGFSTNNLLGSGAFGSVYKGELDGQSSENTNIVAVKVLKLQNHGALKSFISECEALRNLRHRNLVKIITACSSIDPTGNDFKAIVFEFMPNEYGAGNTMSMHGDIYSYGILVLETITGKRPIGSEFREGLSLREYVQLGLQDRVMDVVDMRLSLDLTDGLQTANDSSYKRKIECVVLLLKLGMSCSHELPSSRLPTGDIIKELLAIKESLSMEYRVR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0221700 SBH 0.0 0.215994 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g42520 SBH 0.633536 0.625440 0.145438
Nipponbare | IRGSP 1.0 | RAP-db Os12g0221700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0014090 SBH 0.146151 0.000000 1.201783
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0014260 SBH 0.050427 1.337043 0.442937
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0017770 SBH 0.164332 9.540369 4.595458
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0013960 SBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0006400 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0300600 RBH 0 0 0.191692
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0013740 RBH 0.000000 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0384800 SBH 1.9215695 4.197475 9.0018155
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0013840 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0016920 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0021540 SBH 1.003323 11.623171 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0021620 SBH 1.201175 0.0 2.811115
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0014110 RBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G017720 SBH 0.042523 0.0 0.112282
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0013760 SBH 0.395411 1.700231 1.308676
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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