Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_12g0013760 OGI:12051120 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr12:18084954-18093659
Gene Symbol -
DNA seq

aaccactctgcctcaccggcgacgccatgcgggtggtgtggcgtgacgtgtggggtgcgcgggcgtagccgtgggcgtgtcacggcgctagacctccgcaggctcggcctaggaggcgccatcgtcgcccaatcgtccctgtccagcctcacctacctccggtggcttgacctctcccagaaccgcctgtgtggtggcgtccccacaccgctgccactctccctcgagtacctcaacctcagtcgtaacgcgctgcagggggcggtgtcctcagagcttggttcgcttcgccgcctccgggtgctcgtcctcgacaccaacaacctcaccggcggcatccctgcctccctcggaaacctcacctccctcaccgatctcgccctcaccagcaaccacctcagcggccacatccccagtgccctcggcaacctccgtgccctcaccagcctctacttgaacgacaacatgctcgagggatccatacccctctcggtgttcaacctctcctctctgcagcattgtcaagccagagcattcgtcatcagactcgggcgcggaaggaaggatcaaatcaagtgggccgtcgactaccgctcggcccagacgggagaggcgcgacaacctgcgcgtgaaggggaaggattgggtccagtagcttctggctaagtctataaatagattacccttgtactgaaagaagtgaactgtatccccttctccaagtctgtatctgctctgttcttctctgttcttctctattccttccaaattccagattctatctctaattcttcttgctgagatctcggttcgtaacatcttggtatcagagctcgtttccatcctggagaagccaaggttccagacgcggctacagcttcaagtcgatgccatggagaaacaagcgggaggattcgagaagatgctcgagggaatccagaacgccatcggcgctgttgcggtgaagcaggatgaaacacaagcggtggtgctccagatggataaagcgatggctagctggcgacctcaagtggatgcagcagtcaagggacttcaatctgagatgggtgagctgaagaaacaagtggagattctggagaagcttcgtggcgagttgggcaattcgtcgaacatgttgcaggcaggcgccatctccacgcggaagcaaggcgacgacaacgatcaacgtccaccgctacttcccacgccggagtcgttcgttgcttcgacgtcggcgggagattctggctcaaatggccaccgcgttgcaatcaacaaccaggggaaggcaacaggagtgattattcctcctgtgccacctccggtcacgggtacaactaattctccattttcccatcgctttgcttgtgattcattgcatcgggatgaagttgggggttctgaggatcgaggctataatcatcgggttccgaaattggattttccacagtttgatggggtagatccacaaaattggcgcatgagatgtgagcattactttggggtttatggtactcatccaatactttgggtcagggtggctaccatttactttactggaagagcagcctcatggttacgctcgtcgaaggctcatttgcggttttctgagtggtcggatttttgcttagcagtggataggaaatttgatcgagataggcatcagatgttgattcgtcagatagagcagattaagcaaaccgggacggtggaggagttttatgagcgctttgatgatgttacgaatcaattgcttgcttttgatcctatgtacaatcagctcacgattgtgcataggttcactgaagggttgcgttttgacattcgtcatgctgttatgatgcaacgtcctcgcgacctagagactgctctggctattgcttgtttataggaggaatggacggagactcagaagcccaaggaatttcgtaaattgggtgatcatgttctgcggattaaaggagcttatcctcttccacttcctcctagcaaggtgtcggaatctagtgcaggggctggcaagtcttcatctgaacctgtcaagactactgctattgctgacagaatgcgagctctcaaggctcatcggcgagcccaaggtctctgttatctttgtgcagagaaatggtcaccatctcacaagtgttcaggttctgtgcagttgaatgctgtgcaggaggtgtttgctctactgcaacaaaatgacagtgattctggtgattcttctggagaggatactgagcctcattctctgttcttgtcagtccatgctattcagggtacaactactgctcaaactatgcgtttgcaagggattattcagggctatgatattctaattctagtagactctggcagttcctgcagtttcatcagttcgtcagtgatgcctcagttgtcgaacttgatacagttgcctgtttcttttcaagttaaggtggctaatggacaaatgttgtcttgtgaaactgaattggctaatgtttcttggtcagttcagggacatcatttttgttctgccttgaaggtgttaccacttcagagttatgatatgattttaggaatggattggttggagcgatacaaccctatggatattgactggcagcagaagacaattcggtttacattggatggccagttgattactttatgtggggtggttccatcagtatctgctaatcctgtcttatcggtactggagttacatcaattgtatcagtccggttctattgaaggtctagttcagttatacacccttgattctgagtctagttctgatttgctaattccggacaatattcagcaattgttacagagctttgcggatgtgtttcaagaaccacaaggacttcctcctgttcgggaatatgatcacactattccgttaattcctggtgcgcaaccagttaatgttcgcctttatcgttatacaccgttgcagaaggatgaaattgaacgccaagttgctgatatattggacagaggtatcatcaaacccagttcaagtcctttctcttctccggttcttttggtcaaaaagaaagatggttcttggcggttttgcgttgattatcgccatcttaatgcgattactgtcaaaaacaaatatcctttgcctataattgatgaactcttggatgaattagcgggcgcttgttggttctctaaattggatttgcgttccggctatcaccaaattcgcatgcatccggatgatgagcataagattgcctttaagacgcatcatgggcattttaagtttcttgtgcttccttttgggttgactagtgctccagcaacatttcagagtattatgaactcggttttagctccatatctgcgacacagtgtattggtgtttgtcgatgacatccttgtttatagtcactctttggcagagcatgaagtgcatttgcgccaagttttgcaaatcttatctgataatcacttgaaggttaagcaatcgaaatgttcttttgctcagccccagttggcttatttgggtcatgtgattagtgccaatggggtagctactgatgaggacaaaattgtggctgttcggaattggattactcctacatcagtcaaagaattgcgcagttttctcgggttatcaggctattaccgcaagtttgtgcgcaattatgggattatttgtaaacctttgactaacttgttaaggaagggacagttgtttgtctggacatctgttcatgaggaggcttttgttactctgaaatatgccttgatctcagctcctgctttggccatgccagactttcagaaacaatttgttgtcgaaacagatgcatctgacaaaggaattggtgctgtcttaatacagtcagatcaccctattgcttcaccctattgcttttctcagtaaagcattaggacctcgcactcagggtctctctacttatgagaaggaaagtttggcaattatcttggctgtggagcattggagatcgtatttgcaacatgatgaatttgtaatacggactgaccaccgtagtttggccttcttagataatcaacgattgtccaccacttggcaacagaaagctcttaccaagttattggggttgcgttatcgtattgtctataaaagggtttggaaaatggagctgctgatgcgttatctcgacaatctcctgttgatatggtggagatttcggcgctatctgtcagtattcctgcttggctgcaggaggtacctctgggatatgctaatgattctgacactcagcggattctcacttctctgcttaataatggaaagcatcatgcacattatgaattgcaatctaatatcctgtattttaagaaaaggatttggattggtaacaataaatctttgcaacagcaaattctggccaatttgcatactgcagctgtgggtggacactctggtaatttggctacttatcatcgagtgaagcaactttttgcttggccaggtttaaggcaatctgtgcacaattttgttcaggcttgtgatgtttgtcaacgagctaagtctgagcatatcaagttacctgggctattacaacctttggaagtacctgatcatgcttggcaagtaatttcaatggatttcattgagggtttaccgttatcagaccattgcaacgtcattttggtcattgtggacaaattttcgaagtttgctcactttttggctcttcgacatccttacacagctttgtctgtctcaactttttatggatcacatacattgcattcatggtctgcctcgtgccatcatttctgaccgagatcgggtatttactagcactttgtggaaggaattatttttaagagctggcactcaattgcgaatgagttcttcttatcatccgcagactgatggacaaacggagagagttaatcaatgtttagagacatttcttcgttgttttgtgcattcttgtcccaaacagtggaagcattggttaggaatggctcagttttggtacaactcttcttaccattcagccattgctatgactccttttgaagcattgtttggtcataaaccatcctatttcggattaactattactgccgttgatgctcctgtgagtttggcttcctggttgactgatctcaataacatgagtgctttgattcatcatcatttgctgcgggctcagcaacgcatgaaacatcaagcagatttacatcggtctgagcgtatcttcactgtgggtgattgggtgttccttaagctccaaccatatgtgcagcaatctgtcatgaccagagccaacaggaaattatccttcaaattttatggaccttttcaagtcttgcaacgagtgggcagtgtggcttacaagttggatttgccgtctacaagtatgatccatcctgtggtgcatgtctctcaactgaagaaggcattggcaccagctgaaaaagttcaggcttctcttcccacgctggattctgaatttggtccattagctgttcctcatcgtattttggaacgccgccttcgtcaacggggtgccaaactaattgaacaagttcaggttgaatggaagggtacttcttctccagctattacatgggagaatcttgaggaacttcgtcacaagtttccagctgcaccagcttggggtggttctcaaggagggaggaatgtcacgccaaagcattcgtcatcagactcgggcgcggaaggaaggatcaaatcaagtgggccgtcgactaccgctcggcccagacgggagaggcgcgacaacccgcgcgtgaaggggaaggattgggtccagtagcttctggctaagtctataaatagattacccttgtactgaaagaagtgaactgtattgaacaaacatattctgaataccaatcccttccccttctccaagtctgtatctgctctgttcttctctgttcttctctattccttccaaattccagattctatctctaattcttcttgctgagatctcggttcgtaacaagcatctcgtcatgcagttcaacaatctcactgggacacttcctccctgcgccggcaacaggctgccccgcctcaaggtgctcagtgttgacagaaaccagccccatggtgccattccggtctctctctgcaattcctccaagctcgaagtgatccagatgatgaagaattccttctcaggagtcatcccggattgccttggagctcacctccagaacctgtgggaactgaccctggatgataaccagctagaagcaaattctgattccgattggagatttctggacagtctgacaaattgcagcaatctgaaggtaattggtctggctggaaacaagctgcgaggacttcttccggcctcgattgcgaacctttcgacgagcatggagttcttgagcatatacaacaacatgataaatgggcaaatacctcagggaattggcaaccttgtcaacctggactcgatttacatacatctgaataaccttgctggcaccattcctgactcaattggcaagcttaagaagctgagtaacctgtacttgtatgacaacaacttgtcagggcaaattccagcaacaattggcaatcttaccatgctgagcagactatccctcaacgagaacatgctaactggctccataccatccagtcttggcaactaccctttggagacactggaactgcaaaacaatcgcctcactggtccaatacccaaagaagttctccagatatctactctctccacctctgccaatttccaaaggaacatgctaacaggatcattgccatcagaagttggtgacctgaaaaacctccaaactttggatgtatctggaaataggttaactggggaaattcctgcctctctcggcaattgtcaaatcttacaatattgcatcatgaaaggaaattttcttcaaggagaaattccatcctcaatcggacaattgaggggtctcttggttcttgatctatcaggaaacaacttgtctggttgcattccggacttactcagtaacatgaaaggtattgaacgcctggatatctccttcaataactttgagggtgaagttccaaaacgtggaatatttcttaatgccagtgccttttcggtcgaggggatcactggcttgtgtgggggtatccctgagctgaaattgccaccttgctcaaactacatcagtactaccaacaagcgattgcacaagcttgtcatggccatctccacagcctttgccattctgggtattgctttactgcttgcactatttgtattctttcgtcaaacaaggaattcaagaaagggagagcatgccttactgctcatcagtgatcagcatgtcagggtttcatatactgagttggtgacttcaacaaatggttttgcttctgagaacctcgtaggtgttggaagcttcggctctgtctacaagggaacaatgatgagcaatgaagaagaggtggttgtcgctgtgaaggtgctcaacctccagcagcgaggagcatcccaaagttttgttgcggaatgtgagactttgagatgtgctagacacaggaaccttatgaaaattttgacggtgtgctcgagcattgattcgagaggtcttgatttcaaagccattgtatttgattttctaccaaatggaaacctacaccagtggctgcaccccagggaacatggcaaccaaactggacttagtcttatccagcggatcaacattgccattgatgtagcttcagcacttgaatatcttcaccaatatagaccagccccaatagttcattgcgatcttaagccaagcaatattctccttgataatgacatggttgcccatgttggtgattttgggcttgcgagatttgttgatcatggtcaacatagcctcccagatatatcaagtggttgggctacaataaggggaaccattggatatgctgctccaggtcaggttcaagctataccctatatacatgttctctacaaatttctatagattcatttctcccttttgtaatcattgcatggtaaaaagcactaccatacacctgcaagtaaaaattaactttactaaaaaaacaaaacaatattagtagacaaaatgctaaaacttgttttatttgatgaagatggtagcgatttatatggttgcaatatttatgtgtctcaaaccagagtatggactcggcaacaaagtctcgatctacggcgacacatacagcttcggagtactactgctggaaatcttcacaggaaaaaggccaacggatgctgatttcgcgcaagatctcaaaaactagaatattagggaaggacctaatatcaaataattaggaggggtgaggctttgaacccaggtcgtctagcccaccaccttgtggagctagccggaagacccctgggcatttctcatttcgcgcaagatctcagccttcacaggtatgtgcagatcgcgctgagagatcaccaagtcgccagcgtgatagacgaacagctactactgtcagtacaagacggcgaaaatgaaggaagagcatccaacagctccagtagtagtagcagcaccagagaagtgattattgcgtacatcgcttcgattctgcagattggaattcggtgttcggaggatgttccaacagatcgcctgctgatctgtgataccctgagaaagcttcaggggttagacgacaagtatcgcgtgcacctacgaattgggggaagatga

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CDS seq

atggagttcttgagcatatacaacaacatgataaatgggcaaatacctcagggaattggcaaccttgtcaacctggactcgatttacatacatctgaataaccttgctggcaccattcctgactcaattggcaagcttaagaagctgagtaacctgtacttgtatgacaacaacttgtcagggcaaattccagcaacaattggcaatcttaccatgctgagcagactatccctcaacgagaacatgctaactggctccataccatccagtcttggcaactaccctttggagacactggaactgcaaaacaatcgcctcactggtccaatacccaaagaagttctccagatatctactctctccacctctgccaatttccaaaggaacatgctaacaggatcattgccatcagaagttggtgacctgaaaaacctccaaactttggatgtatctggaaataggttaactggggaaattcctgcctctctcggcaattgtcaaatcttacaatattgcatcatgaaaggaaattttcttcaaggagaaattccatcctcaatcggacaattgaggggtctcttggttcttgatctatcaggaaacaacttgtctggttgcattccggacttactcagtaacatgaaaggtattgaacgcctggatatctccttcaataactttgagggtgaagttccaaaacgtggaatatttcttaatgccagtgccttttcggtcgaggggatcactggcttgtgtgggggtatccctgagctgaaattgccaccttgctcaaactacatcagtactaccaacaagcgattgcacaagcttgtcatggccatctccacagcctttgccattctgggtattgctttactgcttgcactatttgtattctttcgtcaaacaaggaattcaagaaagggagagcatgccttactgctcatcagtgatcagcatgtcagggtttcatatactgagttggtgacttcaacaaatggttttgcttctgagaacctcgtaggtgttggaagcttcggctctgtctacaagggaacaatgatgagcaatgaagaagaggtggttgtcgctgtgaaggtgctcaacctccagcagcgaggagcatcccaaagttttgttgcggaatgtgagactttgagatgtgctagacacaggaaccttatgaaaattttgacggtgtgctcgagcattgattcgagaggtcttgatttcaaagccattgtatttgattttctaccaaatggaaacctacaccagtggctgcaccccagggaacatggcaaccaaactggacttagtcttatccagcggatcaacattgccattgatgtagcttcagcacttgaatatcttcaccaatatagaccagccccaatagttcattgcgatcttaagccaagcaatattctccttgataatgacatggttgcccatgttggtgattttgggcttgcgagatttgttgatcatggtcaacatagcctcccagatatatcaagtggttgggctacaataaggggaaccattggatatgctgctccaggtcagattggaattcggtgttcggaggatgttccaacagatcgcctgctgatctgtgataccctgagaaagcttcaggggttagacgacaagtatcgcgtgcacctacgaattgggggaagatga

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Protein seq

MEFLSIYNNMINGQIPQGIGNLVNLDSIYIHLNNLAGTIPDSIGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNYPLETLELQNNRLTGPIPKEVLQISTLSTSANFQRNMLTGSLPSEVGDLKNLQTLDVSGNRLTGEIPASLGNCQILQYCIMKGNFLQGEIPSSIGQLRGLLVLDLSGNNLSGCIPDLLSNMKGIERLDISFNNFEGEVPKRGIFLNASAFSVEGITGLCGGIPELKLPPCSNYISTTNKRLHKLVMAISTAFAILGIALLLALFVFFRQTRNSRKGEHALLLISDQHVRVSYTELVTSTNGFASENLVGVGSFGSVYKGTMMSNEEEVVVAVKVLNLQQRGASQSFVAECETLRCARHRNLMKILTVCSSIDSRGLDFKAIVFDFLPNGNLHQWLHPREHGNQTGLSLIQRINIAIDVASALEYLHQYRPAPIVHCDLKPSNILLDNDMVAHVGDFGLARFVDHGQHSLPDISSGWATIRGTIGYAAPGQIGIRCSEDVPTDRLLICDTLRKLQGLDDKYRVHLRIGGR

Function Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0013760 OsNaBo_12g0013760.01 Chr12 18084954 18093659 + NAM
CDS seq

atggagttcttgagcatatacaacaacatgataaatgggcaaatacctcagggaattggcaaccttgtcaacctggactcgatttacatacatctgaataaccttgctggcaccattcctgactcaattggcaagcttaagaagctgagtaacctgtacttgtatgacaacaacttgtcagggcaaattccagcaacaattggcaatcttaccatgctgagcagactatccctcaacgagaacatgctaactggctccataccatccagtcttggcaactaccctttggagacactggaactgcaaaacaatcgcctcactggtccaatacccaaagaagttctccagatatctactctctccacctctgccaatttccaaaggaacatgctaacaggatcattgccatcagaagttggtgacctgaaaaacctccaaactttggatgtatctggaaataggttaactggggaaattcctgcctctctcggcaattgtcaaatcttacaatattgcatcatgaaaggaaattttcttcaaggagaaattccatcctcaatcggacaattgaggggtctcttggttcttgatctatcaggaaacaacttgtctggttgcattccggacttactcagtaacatgaaaggtattgaacgcctggatatctccttcaataactttgagggtgaagttccaaaacgtggaatatttcttaatgccagtgccttttcggtcgaggggatcactggcttgtgtgggggtatccctgagctgaaattgccaccttgctcaaactacatcagtactaccaacaagcgattgcacaagcttgtcatggccatctccacagcctttgccattctgggtattgctttactgcttgcactatttgtattctttcgtcaaacaaggaattcaagaaagggagagcatgccttactgctcatcagtgatcagcatgtcagggtttcatatactgagttggtgacttcaacaaatggttttgcttctgagaacctcgtaggtgttggaagcttcggctctgtctacaagggaacaatgatgagcaatgaagaagaggtggttgtcgctgtgaaggtgctcaacctccagcagcgaggagcatcccaaagttttgttgcggaatgtgagactttgagatgtgctagacacaggaaccttatgaaaattttgacggtgtgctcgagcattgattcgagaggtcttgatttcaaagccattgtatttgattttctaccaaatggaaacctacaccagtggctgcaccccagggaacatggcaaccaaactggacttagtcttatccagcggatcaacattgccattgatgtagcttcagcacttgaatatcttcaccaatatagaccagccccaatagttcattgcgatcttaagccaagcaatattctccttgataatgacatggttgcccatgttggtgattttgggcttgcgagatttgttgatcatggtcaacatagcctcccagatatatcaagtggttgggctacaataaggggaaccattggatatgctgctccaggtcagattggaattcggtgttcggaggatgttccaacagatcgcctgctgatctgtgataccctgagaaagcttcaggggttagacgacaagtatcgcgtgcacctacgaattgggggaagatga

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Protein seq

MEFLSIYNNMINGQIPQGIGNLVNLDSIYIHLNNLAGTIPDSIGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNYPLETLELQNNRLTGPIPKEVLQISTLSTSANFQRNMLTGSLPSEVGDLKNLQTLDVSGNRLTGEIPASLGNCQILQYCIMKGNFLQGEIPSSIGQLRGLLVLDLSGNNLSGCIPDLLSNMKGIERLDISFNNFEGEVPKRGIFLNASAFSVEGITGLCGGIPELKLPPCSNYISTTNKRLHKLVMAISTAFAILGIALLLALFVFFRQTRNSRKGEHALLLISDQHVRVSYTELVTSTNGFASENLVGVGSFGSVYKGTMMSNEEEVVVAVKVLNLQQRGASQSFVAECETLRCARHRNLMKILTVCSSIDSRGLDFKAIVFDFLPNGNLHQWLHPREHGNQTGLSLIQRINIAIDVASALEYLHQYRPAPIVHCDLKPSNILLDNDMVAHVGDFGLARFVDHGQHSLPDISSGWATIRGTIGYAAPGQIGIRCSEDVPTDRLLICDTLRKLQGLDDKYRVHLRIGGR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.395411 1.700231 1.308676

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0498650 RBH 0.621047 0.605169 1.120190
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g31470 RBH 0.524899 0.543281 0.321447
Nipponbare | IRGSP 1.0 | RAP-db Os12g0498650 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0014090 RBH 0.146151 0.000000 1.201783
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0014260 RBH 0.050427 1.337043 0.442937
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0014150 RBH 0.654747 0.538009 2.992458
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0013960 RBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0013580 RBH 2.856770 1.551252 5.101980
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0256800 RBH 0.9678885 4.1016695 2.831454
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0013750 RBH 0.000000 0.077825 0.399333
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0281000 RBH 0.862961 2.7919995 3.933795
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0013850 RBH 0.107367 0.059031 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0014070 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0014020 RBH 0.0 14.913312 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0013930 RBH 0.382293 0.0 0.258029
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0014120 RBH 0.111736 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G013940 RBH 0.123480 1.167029 0.101663
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0004010 SBH 0.630622 3.130005 0.941510
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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