Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0023590 | OGI:11077650 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:30210260-30221912 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, Osh359-2 | ||||||||||
| DNA seq | atggttgtcatacctagcatgggtaaggaggagattaagttgagaacttttagaacccaacaaaacccactgggaattgagaagacatttttcatgagatttgtgtatcttcgtgttttggatctgattgacttacttgtggaaaaaataccagattgtcttggaaatttaattcatctacgtttactcgatcttgatggaaccctcatatccagtgttccagagtctcttggtgctctaaaaaatctccagatgttacacttacagaggtgtaaatctttgcacagtttgcctagtgcaatcactcggttatgcaatttaaggcggcttggtattgattttacaccaataaataaggttccaagagggataggaagactgcaattcctcaatgatttagaaggatttcatgttggtggtggaagtgacaatactaaaatgcaagacggatggaacttgtaggagttagctcatctttcacagttgcgccagcttgacttaaacaaattggaaagagcaactcctaggagcagcacagatgcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgcaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagttaactcctccacgcaatttagaagatcttatgattgtatcattctttgggcgaaggttccccacctggcttcgtactgcccatttgtcttcagtaaaatacgtgatccacaagattgccaatcctgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctaaaaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcgaattgttggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggtgtaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagccaaagggggaagaagccctgtctccaactccaaggtcgtcgtggctgctgccttgtttgaaggagttggaactattaggctgccccaagctgaggggtctcccaccacagcttggacagcaggccaccaacttgaaggagctcattataagagaagcagaatgcttgaagacggtggaggacctcccattcctctctggttgcctttcaattggtggatgtgagggcctggagagggtctccaaccttccccaagtgagagagctgtttgtaactcgttgcccaaatttgaggcatgttgagatgttgggcagtttggagcagctatggctagatgagggtatgcaggagatctctcagctgtgggtcccaaggcttcaagagcaaaactgccagctccatggagatgagcatgagctggaggtcattgcgtggctctgagacccaattaatttagatggtgcaaggtatgtacactaattggttgggatttttcactgcaataaactaatcatagggttgtgcattcatcatgctcctctgctcttcagttgtatgcagctaatctagcgtttgatagtttccttagttgttcatgttgtgtgcattgactgattgtttaatgacctatatgattttgtcttttttcattagtgctgcatgtaaccatttcactgtggtcaatattttcataaaatggtggatatccatccaaggacttgtggtagttagggagaatcatttttttcacctttggtacacaaactgcataagtaaaggagacatatgggccaagaaataaatatgatttagttcagatgcataacagtttacttgcatttagccctcaatgacccaaatgtgttttgtatcgagatcatgcatgtatataggagacattgaagggagcacatattatcttgtaaaaacaagtagatatgccaatttttcatgaaatatttcaactgtgcaatatattagacctatacgacggtcattttagacttgcaagcgatacaacgcccaattctacagatttttggcctgcagcctgttggcagcaggacattgaacacaaaaggggcagcgcccaacatctgctcctaggccactaaggtttgtttggaaaataaaagctgcctaaatgcctttgtatttgttccaattgattaatattttagttatatccctaagaaataaaataagcggggtatattgccctacctacatgcttatgtgtagttcatatgtggctttttcttagactatttttttttcttgtgtctagtaggtttaactccagaaaacatgttttttttgcaaaaactgatgaaccttgtattttattttccttaactaagttattgaagtaccaaattgcttatatatagcgatgcttaatttgtgtgtgcttgtttattttgtaggttgctaatctcgaagatttgggcagtgcaggcactttcttatttatttgttatctgtacgtagttactgatctatggaagatttaagaaatccaaaaaaaaaagaaaaataaaaaaaaggtaaaactaagcaaaaaaataaagaaaaaaaaaacaggggcatttgctttacctcatgaaatgtatttcatgtttttttttatgatttgtgtgtttcttcttcttcttcttcttcttcttcttcttcttcttcttgtaggtgtgtaggtaactccgcctatctcacttgaggtgtgattttaatgacatagccggtcccaagcccggaaaaggaggggataatcttgtatatatacttgtctagtgaaacgatgctgtgctgctaggtggatcattgaaaattttcttgaaatttgctgcattcttgtctattcaattattagaggcacatccactctgctgctcgcctgctctattggacaaatttgattctaaactattttagctcaacctcattacaatccagctttcaagtaaaagcaattgaacacatgcaccaattcattctcctcccagtcccctgtttgggagcacgcacaagctgcaggatgggcgactgtcgggctgacaaagccaactttggtcgacaagaagatatcgggcagcgagcaggtggctgacgagcaagtggtgacggtagcggatggtgatatggttttgtcggcgcagcctgaaaaggagatgaccgcggcaatgcttcttaagtcttcgggacacgctggttcgcactatccagagaccggcagcaatgaagcagtggctgtcgggcttgcgccgcacatgacaccaatacgccgcagtgatcgttccaactccgagacagccctcggcatcgcttcggccgatgatgactctctgttgaaagcgatgaagaggaaagcagccatcaatctgcatgatcaatttgccccttatggggcaaggccggccttgttggcttcccctcaaggtacacctaatgagccttttacaagttcttgttccgcttctcaacttagtttttgttcgtctttaaaccgtattggggtctctttggaaaataattctgctgaggttgatttttctattaaagcccttaagcacatcaatgttgacaaattgaaagtaatccctaaagcaaactcttcattttccctaaaccactgccgccatggatgagcttggagttaaggggtggcagggatggcaaaggctgtgagagggaagggaagagcaaattgagtggcgggagatcatgttcagatatttaccgacgacggttgggtttaaccgggggtgaagacgagcggcggtgagctagcgtcctcctaggctcgacgcgcggcggcggcggcgaggggtaaaatagctggctcggcggcgttcggttcgagttgagagagggaaagttacttacaccttttgtgtttaaatgagcggcgaatttggagggtttcatccccggtagaggcgaagtcagcttcggcgtcgacatcgggtgggcgcgcatggcggcagacggcggcgagctgtggcggtggccgtcccggatttgtcttgacatgattggtgcgacgacggttggttgaggcgcaccggacagatggatggcgcgccaaggcggccgggcacgcgcgggcggtcatggagccgacgcgcggcggctgcggcggcgcgacgcgcagggcaccaaggcagcatggcagggggtggaaaagcaaagagaggccacggttttggatgggtgtggtcccccaaggatcaattctagactttgcaaatatttgggtggatgctgggctgctatggccggactaggcatttcatcgagcaactcatgtgcaatgaacagtgaaattcagaaatttgacaaattggctaaggagaaaagaatttctcttggggtttttgaagggtttttgctagggttttgtactataactaagtctcacaaatataagggtaatttaaagaaggtttctagatttaatattttgaaagaaatttgttaaactcactagagtttagggtaggggagtaattagaatatttttgggtacgatggtatagggtaggtttaaaggaattttaaaggggtaatacttgaaccaaaaatgaagatttaaaaggaactattaaaaaggattttgattttgctaaattaagattaattcaagtcaaaagccagcatgatgcagtcaaattttagattaaaatttgaggatgttacattggagcaggcagcgcggttcacggaccccgccgaggtgaccacgcccgctgccgaggggcagcacgggggtgccatttagaagctctggggcaacaccgacgaggtcgtgctcctcgccggcgccgccaccttccgcgcgcgctcatccatgtcccacgcctcctggacatgggcgcgcttttcgactccatcaggggctccctctccctgcacattgaccaagccaaggtgtactacaagctgaagtggctcaagggcaagtacctgcacgtggcgcccggtgcgttcgcgggactgcacgaacgctgcgtgcacgacctctgcacgagcgtgtggggcgccgacctcgagccccttgttggcgacgatgaaggggccgccgccgccgccgccgaccaaccgcgcattgtcccggacgccgccaccatgctgcatgtgctgcatgccgcctctcagctccatcgccgcccctctgcgccgcccgccgccgctcgccattctcaagggagagagagagggagggatagagagaaggagagagaggatagagagaaggggtagtgaggatgataggtggggtccacgtgggccccaccatttttttattattgtgtgtgtgaaaccgacatgtgggtcccataggttttattttttttggatcgaattgccacgtaagcgccacgtcaatgccacgtcagatgaagatcgagtcaaattagccacgtaggtgccacctcagccaaaaccagggtcaaatactaccgagggaccttatttaaacggttttgtaagttgggggacctgtcgtacccacttttgcaattaagggatgaaaatcagactaggcgacaaatagagggaaccaaagtgaacttattccacagcgaatccccttgatgggccatacaatatgggccgcacgttgcatccggccgtagcagcccacgatctccccagggcggccgctcgccaagccctcgccgtcgccggccgcccgccgccgtcgctttcctcgtctgagacggcgaacccctgcccaccacaccgccatgttcgctgcgagcccggccggaccgccatatgcgggcgcgcacgatcgagcatccccaactctgcctgaacacacaacatgaataatacatgcaagtttcagtcactgctactcactgcttgtctgcatctgaaagttcagacttttacttacggattctattagtattactgcatctgcacgcatgagaaagtatttcttttataaaaaatattttcttaaaaagtttttaacctaggtgcccatggatttgatttttgacatgcttaatgtgtgttcatagctatctaagatttggaaacctgtgaattgtgcatggactgattttttacgggcacagtgctacgctacttcactatgacttccccgaatgcaaaatagaccttttgttttctggattgctcataagcatcgtctatgtagatgttttcaacataaaagtacccatggatctggttgagccaacaaatgaaagaataacatcgttacaaacaaatactactaatcactaatcagccggtcagaatcgcacaatatatatgcatgatgttatataacaaaggcactgttgatccaacaaaacctgaaaatagtagcacccaaggaggaaggtggtgatcttaaatcaatggacaataatgaatatctgaatcttctcattcggttattagtttcgacattgttggttgctctttgatgttcttgcatatttaactcaagaccaaattcatgtagatgtaggcaaatattcatgttcaatctgttgaagcatataattgcagttctgaacatctcttggctagaaagctgcggctgccctgcaattccgctggcagaggagaggactacaagtgcagcaatatatgttgtgtgcaattgtgcatgagtgcacaagttgaaaaaaggtaatattatttcattccgaaaagatagaacaaccgtgaaaataacgttcaaaccagtcagttcagaggagaatacggtgatggacagaaggccagaaaacaacccaattgtgagaatcgataatttttctagacaatgaatggtgagcaattgatcttggtgaagctgaaccagataagttgacagcgttactgttagtggtgatcagcccagccatccgtaaatcctttcttgcattttgcccaatacaagtcagcaagtcaagatgttcttatcgtttcagactaagtggacactggaatctgttcttttcacatccacactgggacacatacagaaaagctaaatggacataccacctaacagcaatatctcttgtcttccactctttgtcactgcataagagccagcccatctggatgatccacgcaatcaccggggaacttgctcgtcatcttcctcgcaataggcgatcgatttgccggcttgccatggctgcatgcaccaaaggcctcgttctggggtgagtctttctttcaattcctcgcaacatagcatgtgcttgccttggtcgttgggtctcatggaaatgtcgtcttgcgatgcagcagacgcgccccatgccgctgctgttcccattgatctaggatcactccggtctttcctttcatgctgagcaagttcgccttctgtacttgagtaaaacccttcaactttgttgccagatatttctttctggttgcccgtttacccaagaagctatagaaaaaggtaacctcattatttcattttttcagattcagtgatccagtatggtcttgtggcaaaacacatgcaaaataacatactagctagatatgtgctcctctcttacaaatatactctactttatgagtcaggctatgtttagttcagtgcaaagtttgaattttagttgaaattggagatgatgtgactgaaaagttgtgtgtgtatgacatgttgatatgatggaaaaggactgaagtttggatcaaaactttggatctaaacacagcctcagtcagacagtaagacaaataattcagttcggtctctagctatgatggtccgtgcatgtcatcgaatgcatttatgcacactcataaagtttgagttgtcagtgttcatactccagtaactgaaaaacatcacagggcaagctataagtcattgcctacaagtacctactagtagtactggtagtaactgaaagctgtgcagctagccttcactggcaagctccaagcagcaacaatctcatatcgatcctctagctccttttttgccaccaaatcaaaggggaaacgttcttgatcatcatcttcctcgccagcggcgatgctgcgcacggctgcacgcaccaattaaggcctcactctgaggtgagtctttcttcctcacgcaccaaccctctgcttgcccacaagctctggttccttgcagtatgagctcctggttccttgcagtatgagctcctgattccttgcaggatgagctcctggttccttgcagctgatggacttggtgagctgatgaacagctgggggtttcaagaaatgtaacccccattattccagttctttagcttcagtatgctaacttgctcaatacacatggcaaaacaacctattaaaaaacataccgaaatgtaaccccattattccagtcctttactgagatgtgcccctctgttgcaaagatactctgaaactgattgaactttgtccattttcagatcgtgtaattgtcataaataatttgattggaaatttttggtgcatcaccatcaacgagtttctctatggcaacaatactgggttctttggttggatcatgcgtaaacaagttgcaagggatcattacagaggaggcaatactaattttaggtgtaaaagatgagcttgaagaactgcagcgaagaacagatctcataagatattctcttcaggatgctgaggcaaggaggatgaaagattctgcagttcaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactacctaactatcctatgtcatcgtcaaggaaatctactgcttgcagtggcctttcactttcatcctgcttttctaatatttgtatacgtcatgaagttgctgtaaaaattagaagcctcaacaaaaagatagatagcatttcaaaggatgatgtatttttaaaactcagccgcacacaacataatggaagtggttcagcatggacacctatagaaagctgcagcctagttgaacctaaccttgtgggcaaggaggtcgtacatgcttgcagagaagtggtggatttggtgcttgcacacaaggcaaagaatgtttacaagcttgctattgttggaacagggggagttggcaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcgtgcctgggtttgtgtctccaaggagtattctatggtttcccttttgacacaagttcttagtaatatgaaaattcattatgaacaaaatgaatcagttgggaaccttcaaagcaaactcaaagcaggcattgcagacaagagttttttccttgtgttggatgatgtatggtactataaagcatgggaagatttactaagaactccactaaatgcggcagccacaggaataattctagtaactactcgagatgaaactattgctcgtgtaattggggtggaccggactcatagagttgatttgatgtcagccgatgtaggatgggagttactttggaggagcatgaacatcaaagaagagaaacaagtgaaaaatctacgggacacaggtatcgagattgtccgcaaatgtggtggcctacctcttgcaatcagggctattgccaaagtcttagcaagcctgcaagatcaaacagagaatgagtggagacagatattggggaaaaatgcctggtccatgagcaaacttcctgatgaattaaatggtgctttatatctgagttatgaagtgctgccgcaccagctgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccattttctgtggtgatcttactaggatgtgggtggctgaaggctttatagatgagcaagaaggccaattactagaagacacagcagagaggtattatcatgagttgatccatcggaacttgctccaaccagatggtttatattttgaccacagctggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgactcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggctcccttcaaagccttcaaatattgaatttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcggcttggtcttgctggtactccaataaaccaggttccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacaataccaaaatacaagatggatggaatttggaagagttgggtcatctttcacagttgaggtgtctttatatgataaaattggagagagctactccttgcagcagtacagacccatttctactatcagagaaaaagtatctcaaagttctgaatctagactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttggttgtacccatttgtcttcagtgaaatctgtgatcctcgtagattgcaaatcttgtgtgcatcttcccccaatcggacagctaccaaacttgaaatacctaagaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcaaattgctggccatcgtggatatgcccaactgggaggagtggtcctttgttgaagaagaacaagaaaaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggtcgtcgtggctgctgccttgtttgaatgagttggaacttgtgaactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacctcattataagagacgcaagatgcttgaagacggtggaggacctcccgttcctctctggtttacttttagttgaaggatgtgaaggcctggagagggtctccaaccttccccaagtgagagacctgcgtgtaaaacattgcccaaatttgaggcatgttgaggagttgggcggtttggagtggctatggctagatgagggtatgctggagatatctcagctgtgggtccctgggcttcaagagcagcaccgccaactccatggagacgagctcgagatcaacgactggcctcgcacatag
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| CDS seq | atggttgtcatacctagcatgggtaaggaggagattaagttgagaacttttagaacccaacaaaacccactgggaattgagaagacatttttcatgagatttgtgtatcttcgtgttttggatctgattgacttacttgtggaaaaaataccagattgtcttggaaatttaattcatctacgtttactcgatcttgatggaaccctcatatccagtgttccagagtctcttggtgctctaaaaaatctccagatgttacacttacagaggtgtaaatctttgcacagtttgcctagtgcaatcactcggttatgcaatttaaggcggcttggtattgattttacaccaataaataaggttccaagagggataggaagactgcaattcctcaatgatttagaaggatttcatgagttagctcatctttcacagttgcgccagcttgacttaaacaaattggaaagagcaactcctaggagcagcacagatgcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgcaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagttaactcctccacgcaatttagaagatcttatgattgttccccacctggcttcgtactgcccatttgtcttcagtaaaatacgtgatccacaagattgccaatcctgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctaaaaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcgaattgttggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagccaaagggggaagaagccctgtctccaactccaaggtcgtcgtggctgctgccttgtttgaaggagttggaactattaggctgccccaagctgaggggtctcccaccacagcttggacagcaggccaccaacttgaaggagctcattataagagaagcagaatgcttgaagacggtggaggacctcccattcctctctggttgcctttcaattggtggatgtgagggcctggagagggtctccaaccttccccaagtgagagagctgtttgtaactcgttgcccaaatttgaggcatgttgagatgttgggcagtttggagcagctatggctagatgagggtatgcaggagatctctcagctgtgggtcccaaggcttcaagagcaaaactgccagctccatggagatgagcatgagctggagtcccctgtttgggagcacgcacaagctgcaggatgggcgactgtcgggctgacaaagccaactttggtcgacaagaagatatcgggcagcgagcaggtggctgacgagcaagtggtgacggtagcggatggtgatatggttttgtcggcgcagcctgaaaaggagatgaccgcggcaatgcttcttaagtcttcgggacacgctggttcgcactatccagagaccggcagcaatgaagcagtggctgtcgggcttgcgccgcacatgacaccaatacgccgcagtgatcgttccaactccgagacagccctcggcatcgcttcggccgatgatgactctctgttgaaagcgatgaagaggaaagcagccatcaatctgcatgatcaatttgccccttatggggcaaggccggccttgttggcttcccctcaaggtacacctaatgagccttttacaagttcttgttccgcttctcaacttagtttttgttcgtctttaaaccgtattggggtctctttggaaaataattctgctgagttgcaagggatcattacagaggaggcaatactaattttaggtgtaaaagatgagcttgaagaactgcagcgaagaacagatctcataagatattctcttcaggatgctgaggcaaggaggatgaaagattctgcagttcaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactacctaactatcctatgtcatcgtcaaggaaatctactgcttgcagtggcctttcactttcatcctgcttttctaatatttgtatacgtcatgaagttgctgtaaaaattagaagcctcaacaaaaagatagatagcatttcaaaggatgatgtatttttaaaactcagccgcacacaacataatggaagtggttcagcatggacacctatagaaagctgcagcctagttgaacctaaccttgtgggcaaggaggtcgtacatgcttgcagagaagtggtggatttggtgcttgcacacaaggcaaagaatgtttacaagcttgctattgttggaacagggggagttggcaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcgtgcctgggtttgtgtctccaaggagtattctatggtttcccttttgacacaagttcttagtaatatgaaaattcattatgaacaaaatgaatcagttgggaaccttcaaagcaaactcaaagcaggcattgcagacaagagttttttccttgtgttggatgatgtatggtactataaagcatgggaagatttactaagaactccactaaatgcggcagccacaggaataattctagtaactactcgagatgaaactattgctcgtgtaattggggtggaccggactcatagagttgatttgatgtcagccgatgtaggatgggagttactttggaggagcatgaacatcaaagaagagaaacaagtgaaaaatctacgggacacaggtatcgagattgtccgcaaatgtggtggcctacctcttgcaatcagggctattgccaaagtcttagcaagcctgcaagatcaaacagagaatgagtggagacagatattggggaaaaatgcctggtccatgagcaaacttcctgatgaattaaatggtgctttatatctgagttatgaagtgctgccgcaccagctgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccattttctgtggtgatcttactaggatgtgggtggctgaaggctttatagatgagcaagaaggccaattactagaagacacagcagagaggtattatcatgagttgatccatcggaacttgctccaaccagatggtttatattttgaccacagctggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgactcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggctcccttcaaagccttcaaatattgaatttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcggcttggtcttgctggtactccaataaaccaggttccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacaataccaaaatacaagatggatggaatttggaagagttgggtcatctttcacagttgaggtgtctttatatgataaaattggagagagctactccttgcagcagtacagacccatttctactatcagagaaaaagtatctcaaagttctgaatctagactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttggttgtacccatttgtcttcagtgaaatctgtgatcctcgtagattgcaaatcttgtgtgcatcttcccccaatcggacagctaccaaacttgaaatacctaagaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcaaattgctggccatcgtggatatgcccaactgggaggagtggtcctttgttgaagaagaacaagaaaaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggtcgtcgtggctgctgccttgtttgaatgagttggaacttgtgaactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacctcattataagagacgcaagatgcttgaagacggtggaggacctcccgttcctctctggtttacttttagttgaaggatgtgaaggcctggagagggtctccaaccttccccaagtgagagacctgcgtgtaaaacattgcccaaatttgaggcatgttgaggagttgggcggtttggagtggctatggctagatgagggtatgctggagatatctcagctgtgggtccctgggcttcaagagcagcaccgccaactccatggagacgagctcgagatcaacgactggcctcgcacatag
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| Protein seq | MVVIPSMGKEEIKLRTFRTQQNPLGIEKTFFMRFVYLRVLDLIDLLVEKIPDCLGNLIHLRLLDLDGTLISSVPESLGALKNLQMLHLQRCKSLHSLPSAITRLCNLRRLGIDFTPINKVPRGIGRLQFLNDLEGFHELAHLSQLRQLDLNKLERATPRSSTDALLLTDKKHLKKLNLCCTAPTDEAYSEEGIGNVEMIFEQLTPPRNLEDLMIVPHLASYCPFVFSKIRDPQDCQSCVHLPPTGQLPNLKYLKINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLELLVIKDMPNWEEWSFVEEEEEEEAAAAAKEGGEDGTAASKPKGEEALSPTPRSSWLLPCLKELELLGCPKLRGLPPQLGQQATNLKELIIREAECLKTVEDLPFLSGCLSIGGCEGLERVSNLPQVRELFVTRCPNLRHVEMLGSLEQLWLDEGMQEISQLWVPRLQEQNCQLHGDEHELESPVWEHAQAAGWATVGLTKPTLVDKKISGSEQVADEQVVTVADGDMVLSAQPEKEMTAAMLLKSSGHAGSHYPETGSNEAVAVGLAPHMTPIRRSDRSNSETALGIASADDDSLLKAMKRKAAINLHDQFAPYGARPALLASPQGTPNEPFTSSCSASQLSFCSSLNRIGVSLENNSAELQGIITEEAILILGVKDELEELQRRTDLIRYSLQDAEARRMKDSAVQKWLDQLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNICIRHEVAVKIRSLNKKIDSISKDDVFLKLSRTQHNGSGSAWTPIESCSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWYYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSWCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDSLVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQSLQILNLQGCESLRRLPLATTQLCNLRRLGLAGTPINQVPKGIGRLKFLNDLEGFPIGGGNDNTKIQDGWNLEELGHLSQLRCLYMIKLERATPCSSTDPFLLSEKKYLKVLNLDCTEQTDEAYSEENARNIEKIFEKLTPPHNLEDLFVGNFFGCRFPTWLGCTHLSSVKSVILVDCKSCVHLPPIGQLPNLKYLRINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLKLLAIVDMPNWEEWSFVEEEQEKEVQEEEAAAAAKEGREDGTAASKQKGEEAPSPTPRSSWLLPCLNELELVNCPKLRALPPQLGQQATNLKDLIIRDARCLKTVEDLPFLSGLLLVEGCEGLERVSNLPQVRDLRVKHCPNLRHVEELGGLEWLWLDEGMLEISQLWVPGLQEQHRQLHGDELEINDWPRT |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023590 | OsPr106_11g0023590.01 | Chr11 | 30210260 | 30221912 | + | NAM | ||
| CDS seq | atggttgtcatacctagcatgggtaaggaggagattaagttgagaacttttagaacccaacaaaacccactgggaattgagaagacatttttcatgagatttgtgtatcttcgtgttttggatctgattgacttacttgtggaaaaaataccagattgtcttggaaatttaattcatctacgtttactcgatcttgatggaaccctcatatccagtgttccagagtctcttggtgctctaaaaaatctccagatgttacacttacagaggtgtaaatctttgcacagtttgcctagtgcaatcactcggttatgcaatttaaggcggcttggtattgattttacaccaataaataaggttccaagagggataggaagactgcaattcctcaatgatttagaaggatttcatgagttagctcatctttcacagttgcgccagcttgacttaaacaaattggaaagagcaactcctaggagcagcacagatgcattgttgctaactgacaaaaagcatctgaaaaaactaaatctatgctgcactgcaccgactgatgaagcatattcagaggaaggcattggcaatgttgagatgatctttgagcagttaactcctccacgcaatttagaagatcttatgattgttccccacctggcttcgtactgcccatttgtcttcagtaaaatacgtgatccacaagattgccaatcctgcgtgcaccttccaccaacagggcagctaccaaacttgaaatacctaaaaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcgaattgttggtcatcaaggatatgcccaactgggaggagtggtcctttgttgaagaagaagaggaggaggaagcagctgcagcagccaaggaagggggagaggatggaactgctgcttcgaagccaaagggggaagaagccctgtctccaactccaaggtcgtcgtggctgctgccttgtttgaaggagttggaactattaggctgccccaagctgaggggtctcccaccacagcttggacagcaggccaccaacttgaaggagctcattataagagaagcagaatgcttgaagacggtggaggacctcccattcctctctggttgcctttcaattggtggatgtgagggcctggagagggtctccaaccttccccaagtgagagagctgtttgtaactcgttgcccaaatttgaggcatgttgagatgttgggcagtttggagcagctatggctagatgagggtatgcaggagatctctcagctgtgggtcccaaggcttcaagagcaaaactgccagctccatggagatgagcatgagctggagtcccctgtttgggagcacgcacaagctgcaggatgggcgactgtcgggctgacaaagccaactttggtcgacaagaagatatcgggcagcgagcaggtggctgacgagcaagtggtgacggtagcggatggtgatatggttttgtcggcgcagcctgaaaaggagatgaccgcggcaatgcttcttaagtcttcgggacacgctggttcgcactatccagagaccggcagcaatgaagcagtggctgtcgggcttgcgccgcacatgacaccaatacgccgcagtgatcgttccaactccgagacagccctcggcatcgcttcggccgatgatgactctctgttgaaagcgatgaagaggaaagcagccatcaatctgcatgatcaatttgccccttatggggcaaggccggccttgttggcttcccctcaaggtacacctaatgagccttttacaagttcttgttccgcttctcaacttagtttttgttcgtctttaaaccgtattggggtctctttggaaaataattctgctgagttgcaagggatcattacagaggaggcaatactaattttaggtgtaaaagatgagcttgaagaactgcagcgaagaacagatctcataagatattctcttcaggatgctgaggcaaggaggatgaaagattctgcagttcaaaaatggcttgaccagctaagagatgttatgtatgatgttgatgatattattgatttggctagatttaaaggaagtgtcctactacctaactatcctatgtcatcgtcaaggaaatctactgcttgcagtggcctttcactttcatcctgcttttctaatatttgtatacgtcatgaagttgctgtaaaaattagaagcctcaacaaaaagatagatagcatttcaaaggatgatgtatttttaaaactcagccgcacacaacataatggaagtggttcagcatggacacctatagaaagctgcagcctagttgaacctaaccttgtgggcaaggaggtcgtacatgcttgcagagaagtggtggatttggtgcttgcacacaaggcaaagaatgtttacaagcttgctattgttggaacagggggagttggcaagacaacactagctcagaaaatattcaatgataaaaaattagaagggagatttgaccatcgtgcctgggtttgtgtctccaaggagtattctatggtttcccttttgacacaagttcttagtaatatgaaaattcattatgaacaaaatgaatcagttgggaaccttcaaagcaaactcaaagcaggcattgcagacaagagttttttccttgtgttggatgatgtatggtactataaagcatgggaagatttactaagaactccactaaatgcggcagccacaggaataattctagtaactactcgagatgaaactattgctcgtgtaattggggtggaccggactcatagagttgatttgatgtcagccgatgtaggatgggagttactttggaggagcatgaacatcaaagaagagaaacaagtgaaaaatctacgggacacaggtatcgagattgtccgcaaatgtggtggcctacctcttgcaatcagggctattgccaaagtcttagcaagcctgcaagatcaaacagagaatgagtggagacagatattggggaaaaatgcctggtccatgagcaaacttcctgatgaattaaatggtgctttatatctgagttatgaagtgctgccgcaccagctgaagcaatgttttctttattgtgcacttttccctgaagatgcaaccattttctgtggtgatcttactaggatgtgggtggctgaaggctttatagatgagcaagaaggccaattactagaagacacagcagagaggtattatcatgagttgatccatcggaacttgctccaaccagatggtttatattttgaccacagctggtgcaagatgcatgatctcttaaggcaacttgcttcttatttgtcaagagaagaatgttttgttggagacccagagtcactagggactaatactatgtgcaaagtacggcgtatttcagttgtcactgagaaggacatagtggtgttacctagcatggacaaggatcaatataaagtgaggtgttttacaaacttatctgggaagtcagcaagaattgataattcacttttcaagagacttgtatgtcttcgcattttggatttgtctgactcacttgtacatgacatcccaggtgcgattggaaatttgatttatctgcggttgctcgatcttgacaggacaaatatatgttctctcccagaggccattggctcccttcaaagccttcaaatattgaatttgcaggggtgtgaatctttgcgcagacttcctttggcaacaactcaactatgcaatttgaggcggcttggtcttgctggtactccaataaaccaggttccaaaagggataggaagactgaaatttctcaatgatttagaaggatttcctatcggtggtggaaatgacaataccaaaatacaagatggatggaatttggaagagttgggtcatctttcacagttgaggtgtctttatatgataaaattggagagagctactccttgcagcagtacagacccatttctactatcagagaaaaagtatctcaaagttctgaatctagactgcactgaacagacagatgaagcatattcagaggaaaatgctagaaacattgaaaagatcttcgagaagctaacacctccacacaacttagaagatctttttgttgggaatttctttggttgtagattccccacctggcttggttgtacccatttgtcttcagtgaaatctgtgatcctcgtagattgcaaatcttgtgtgcatcttcccccaatcggacagctaccaaacttgaaatacctaagaattaatggagcaagtgcaatcaccaagattggacccgaatttgttggctgctgggagggtaatctcagatccacagaggcagttgctttccccaagctcaaattgctggccatcgtggatatgcccaactgggaggagtggtcctttgttgaagaagaacaagaaaaagaggtgcaggaggaggaagcagctgcagcagccaaggaagggagagaggatggaactgctgcttcgaagcaaaagggggaggaagccccgtctccaactccaaggtcgtcgtggctgctgccttgtttgaatgagttggaacttgtgaactgccccaagctgagggctctcccaccacagcttggacagcaggccaccaacttgaaggacctcattataagagacgcaagatgcttgaagacggtggaggacctcccgttcctctctggtttacttttagttgaaggatgtgaaggcctggagagggtctccaaccttccccaagtgagagacctgcgtgtaaaacattgcccaaatttgaggcatgttgaggagttgggcggtttggagtggctatggctagatgagggtatgctggagatatctcagctgtgggtccctgggcttcaagagcagcaccgccaactccatggagacgagctcgagatcaacgactggcctcgcacatag
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| Protein seq | MVVIPSMGKEEIKLRTFRTQQNPLGIEKTFFMRFVYLRVLDLIDLLVEKIPDCLGNLIHLRLLDLDGTLISSVPESLGALKNLQMLHLQRCKSLHSLPSAITRLCNLRRLGIDFTPINKVPRGIGRLQFLNDLEGFHELAHLSQLRQLDLNKLERATPRSSTDALLLTDKKHLKKLNLCCTAPTDEAYSEEGIGNVEMIFEQLTPPRNLEDLMIVPHLASYCPFVFSKIRDPQDCQSCVHLPPTGQLPNLKYLKINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLELLVIKDMPNWEEWSFVEEEEEEEAAAAAKEGGEDGTAASKPKGEEALSPTPRSSWLLPCLKELELLGCPKLRGLPPQLGQQATNLKELIIREAECLKTVEDLPFLSGCLSIGGCEGLERVSNLPQVRELFVTRCPNLRHVEMLGSLEQLWLDEGMQEISQLWVPRLQEQNCQLHGDEHELESPVWEHAQAAGWATVGLTKPTLVDKKISGSEQVADEQVVTVADGDMVLSAQPEKEMTAAMLLKSSGHAGSHYPETGSNEAVAVGLAPHMTPIRRSDRSNSETALGIASADDDSLLKAMKRKAAINLHDQFAPYGARPALLASPQGTPNEPFTSSCSASQLSFCSSLNRIGVSLENNSAELQGIITEEAILILGVKDELEELQRRTDLIRYSLQDAEARRMKDSAVQKWLDQLRDVMYDVDDIIDLARFKGSVLLPNYPMSSSRKSTACSGLSLSSCFSNICIRHEVAVKIRSLNKKIDSISKDDVFLKLSRTQHNGSGSAWTPIESCSLVEPNLVGKEVVHACREVVDLVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHRAWVCVSKEYSMVSLLTQVLSNMKIHYEQNESVGNLQSKLKAGIADKSFFLVLDDVWYYKAWEDLLRTPLNAAATGIILVTTRDETIARVIGVDRTHRVDLMSADVGWELLWRSMNIKEEKQVKNLRDTGIEIVRKCGGLPLAIRAIAKVLASLQDQTENEWRQILGKNAWSMSKLPDELNGALYLSYEVLPHQLKQCFLYCALFPEDATIFCGDLTRMWVAEGFIDEQEGQLLEDTAERYYHELIHRNLLQPDGLYFDHSWCKMHDLLRQLASYLSREECFVGDPESLGTNTMCKVRRISVVTEKDIVVLPSMDKDQYKVRCFTNLSGKSARIDNSLFKRLVCLRILDLSDSLVHDIPGAIGNLIYLRLLDLDRTNICSLPEAIGSLQSLQILNLQGCESLRRLPLATTQLCNLRRLGLAGTPINQVPKGIGRLKFLNDLEGFPIGGGNDNTKIQDGWNLEELGHLSQLRCLYMIKLERATPCSSTDPFLLSEKKYLKVLNLDCTEQTDEAYSEENARNIEKIFEKLTPPHNLEDLFVGNFFGCRFPTWLGCTHLSSVKSVILVDCKSCVHLPPIGQLPNLKYLRINGASAITKIGPEFVGCWEGNLRSTEAVAFPKLKLLAIVDMPNWEEWSFVEEEQEKEVQEEEAAAAAKEGREDGTAASKQKGEEAPSPTPRSSWLLPCLNELELVNCPKLRALPPQLGQQATNLKDLIIRDARCLKTVEDLPFLSGLLLVEGCEGLERVSNLPQVRDLRVKHCPNLRHVEELGGLEWLWLDEGMLEISQLWVPGLQEQHRQLHGDELEINDWPRT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.850866 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0673600 | SBH | 0.222929 | 0.046989 | 0.384975 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44960 | SBH | 0.100980 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676050 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023690 | RBH | 0.0 | 22.994581 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023460 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023120 | SBH | 0.160988 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023150 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023330 | SBH | 0.0 | 1.100177 | 0.566270 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0419900 | SBH | 0.593919 | 1.271223 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024080 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0429800 | SBH | 0 | 0 | 0.0126405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023800 | SBH | 0.366803 | 0.284244 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023790 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023410 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023080 | SBH | 0.000000 | 0.0 | 0.239393 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023260 | RBH | 0.907562 | 3.272615 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023570 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023810 | SBH | 0.0 | 3.817796 | 0.0 |
