Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0419100 | OGI:07038620 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:13383377-13383987 | ||||||||
| Gene Symbol | CYP709C9, OsCYP709C9 | ||||||||||
| DNA seq | CTAGGTGAGCAAGTGTGAGGTGGTGTCATGCCCTGCAAAAAAGAAGGTCTTGCACTCGTCGATGATCTCATCCATGCTTAGTTGTGGGTGGCTCTCCCTGTGCTCCGGCGCACACGCCTCCAGCAGCAACCCAAGTAGGTCATTCCCATACCCAACTACATCCTTGTTGGCGTGCCTGGTCTTGATGATGTCCATGAGCATGCCCCTCACCTTCTTGTCGAGCGACCATGTCTTGAAGTTTTTCATGGTCGGAAGGTAGCTGATTCATTTTCAAAAAAAAGCACCGATATATTATTTTGTGTTCTTTCTAAATCTATTTGTATCGGGATAAGTTAATAATGTGTGTACCTAAACCCTGGAACTTGAACAGTGAGGAAGGTGGAGAAGGCAAGAAATTGGAGCTCCCTCTGTGCCAGGAAGACCTGCTTCCCCTCTTTGTAGCTGCTACCAAACACTGTGTGCGAGATCACATTGGCAGTGAGCTCCTCGAAACGCCTGCTTAGCTCAATCTCAGCAAGACCACCCTTCGCCCCTAACTCCGATTCCCACTCCGACATCATGGACCGAGAGCAGTCGGACATGGTCATCGTCATCATCTTGAGCTTGTCCAT
More
|
||||||||||
| CDS seq | ATGGACAAGCTCAAGATGATGACGATGACCATGTCCGACTGCTCTCGGTCCATGATGTCGGAGTGGGAATCGGAGTTAGGGGCGAAGGGTGGTCTTGCTGAGATTGAGCTAAGCAGGCGTTTCGAGGAGCTCACTGCCAATGTGATCTCGCACACAGTGTTTGGTAGCAGCTACAAAGAGGGGAAGCAGGTCTTCCTGGCACAGAGGGAGCTCCAATTTCTTGCCTTCTCCACCTTCCTCACTGTTCAAGTTCCAGGGTTTAGCTACCTTCCGACCATGAAAAACTTCAAGACATGGTCGCTCGACAAGAAGGTGAGGGGCATGCTCATGGACATCATCAAGACCAGGCACGCCAACAAGGATGTAGTTGGGTATGGGAATGACCTACTTGGGTTGCTGCTGGAGGCGTGTGCGCCGGAGCACAGGGAGAGCCACCCACAACTAAGCATGGATGAGATCATCGACGAGTGCAAGACCTTCTTTTTTGCAGGGCATGACACCACCTCACACTTGCTCACCTAG
More
|
||||||||||
| Protein seq | MDKLKMMTMTMSDCSRSMMSEWESELGAKGGLAEIELSRRFEELTANVISHTVFGSSYKEGKQVFLAQRELQFLAFSTFLTVQVPGFSYLPTMKNFKTWSLDKKVRGMLMDIIKTRHANKDVVGYGNDLLGLLLEACAPEHRESHPQLSMDEIIDECKTFFFAGHDTTSHLLT |
||||||||||
| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0419100 | OsNip_07t0419100-00 | Chr07 | 13383377 | 13383987 | - | RAP2018-11-26 | ||
| CDS seq | ATGGACAAGCTCAAGATGATGACGATGACCATGTCCGACTGCTCTCGGTCCATGATGTCGGAGTGGGAATCGGAGTTAGGGGCGAAGGGTGGTCTTGCTGAGATTGAGCTAAGCAGGCGTTTCGAGGAGCTCACTGCCAATGTGATCTCGCACACAGTGTTTGGTAGCAGCTACAAAGAGGGGAAGCAGGTCTTCCTGGCACAGAGGGAGCTCCAATTTCTTGCCTTCTCCACCTTCCTCACTGTTCAAGTTCCAGGGTTTAGCTACCTTCCGACCATGAAAAACTTCAAGACATGGTCGCTCGACAAGAAGGTGAGGGGCATGCTCATGGACATCATCAAGACCAGGCACGCCAACAAGGATGTAGTTGGGTATGGGAATGACCTACTTGGGTTGCTGCTGGAGGCGTGTGCGCCGGAGCACAGGGAGAGCCACCCACAACTAAGCATGGATGAGATCATCGACGAGTGCAAGACCTTCTTTTTTGCAGGGCATGACACCACCTCACACTTGCTCACCTAG
More
|
|||||||
| Protein seq | MDKLKMMTMTMSDCSRSMMSEWESELGAKGGLAEIELSRRFEELTANVISHTVFGSSYKEGKQVFLAQRELQFLAFSTFLTVQVPGFSYLPTMKNFKTWSLDKKVRGMLMDIIKTRHANKDVVGYGNDLLGLLLEACAPEHRESHPQLSMDEIIDECKTFFFAGHDTTSHLLT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0418500 | SBH | 0.0 | 0.257456 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g23570 | SBH | 0.0 | 0.167644 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0419100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024620 | SBH | 0.0 | 5.121840 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024670 | SBH | 0.000000 | 0.000000 | 1.519489 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024530 | SBH | 0.000000 | 8.664426 | 1.697673 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024450 | SBH | 0.584457 | 0.422069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0024580 | SBH | 3.806940 | 10.738488 | 12.961476 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0232900 | SBH | 0.0096085 | 0.7130745 | 0.267821 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025110 | SBH | 0.156677 | 0.756884 | 1.095535 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0235300 | SBH | 0.0295365 | 1.4684925 | 0.550277 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024360 | SBH | 0.072798 | 0.508891 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024500 | SBH | 0.210472 | 11.452056 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024430 | SBH | 6.788849 | 9.310127 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0011980 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024340 | RBH | 0.055726 | 1.310296 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | SBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024350 | SBH | 0.000000 | 4.776464 | 5.837886 |
