Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0602200 | OGI:01013090 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:23663277-23664196 | ||||||||
| Gene Symbol | CYP72A31, CYP72A32, OsCYP72A32 | ||||||||||
| DNA seq | TCATATAGCTCTAACTTTCATCTGTGCACCGTGCATTGGATGCAGAGTTACCATAGTATGCGGCGCATGAGTATATGATGGCGCAAGCTCAAACTCCAAGCGTTGAAGAATCAGGCACAATGCCATCTTGGACTCAAGCAGCGCGAAGTTTTGGCCGATGCAGATTCGTGGCCCCCAACCGAATGGGAGGAATGCTCCCGGATCCTTAGACGCCTTAGAGATCCCCTCAGAGAACCTCTCAGGCTTGAACTCATGCACATCACTTCCCCATGAGTCCGGATCATGGTGGATGAACAACACGGGGATTTTAATGCTAACACCAGCTGGGTAAGTGACTCCTCCTATCTCCATCTCTTTGTATGTTTTCCAACCAATCTCGATGAACGGTGGGTGCAACCGAAGAACCTCGTAGAAGATCATTGTCACCTGCATGACACATAAATCGATGAGATTTAATTTAGCGCATACGAGTTAATTAGATCTAGCTGCACTCATGATGAACGAAATGGAATTATAAAATTATGCAAGATACTGACAATTTTGAGGCGGCTCAAGCCTTCGTAGTCAGGTTTGTTCTTCCTAAATAATCCCATAATCTCTTCCCTTGCATGGTCCTGCCACTCCGGGTGTATGCTTAATAGCAGCATGGTCCATGTGAGAAGCACTGATGTTGTCTCCGCTCCTGCAAAGTAGAACAGCTTGCACTCCTCCACGATATCCTTGATTGTCAACCCCTGGCTTGATTGACCATTCTCTTCCATGTGCTTTGTGTTTGACTCAAGCAATATGCCAAGTAAATCATCTTTTGTGCTTTCACCTTCTTTCATAGCTTGCATTCTTTTCCCAATTAAACCTCTTAGAATCGATTCGATCTCTTTATTTATTTGATGCATCTTCCGGTTGTTCTCAATAGGCAAAGA
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| CDS seq | TCTTTGCCTATTGAGAACAACCGGAAGATGCATCAAATAAATAAAGAGATCGAATCGATTCTAAGAGGTTTAATTGGGAAAAGAATGCAAGCTATGAAAGAAGGTGAAAGCACAAAAGATGATTTACTTGGCATATTGCTTGAGTCAAACACAAAGCACATGGAAGAGAATGGTCAATCAAGCCAGGGGTTGACAATCAAGGATATCGTGGAGGAGTGCAAGCTGTTCTACTTTGCAGGAGCGGAGACAACATCAGTGCTTCTCACATGGACCATGCTGCTATTAAGCATACACCCGGAGTGGCAGGACCATGCAAGGGAAGAGATTATGGGATTATTTAGGAAGAACAAACCTGACTACGAAGGCTTGAGCCGCCTCAAAATTGTGACAATGATCTTCTACGAGGTTCTTCGGTTGCACCCACCGTTCATCGAGATTGGTTGGAAAACATACAAAGAGATGGAGATAGGAGGAGTCACTTACCCAGCTGGTGTTAGCATTAAAATCCCCGTGTTGTTCATCCACCATGATCCGGACTCATGGGGAAGTGATGTGCATGAGTTCAAGCCTGAGAGGTTCTCTGAGGGGATCTCTAAGGCGTCTAAGGATCCGGGAGCATTCCTCCCATTCGGTTGGGGGCCACGAATCTGCATCGGCCAAAACTTCGCGCTGCTTGAGTCCAAGATGGCATTGTGCCTGATTCTTCAACGCTTGGAGTTTGAGCTTGCGCCATCATATACTCATGCGCCGCATACTATGGTAACTCTGCATCCAATGCACGGTGCACAGATGAAAGTTAGAGCTATATGA
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| Protein seq | SLPIENNRKMHQINKEIESILRGLIGKRMQAMKEGESTKDDLLGILLESNTKHMEENGQSSQGLTIKDIVEECKLFYFAGAETTSVLLTWTMLLLSIHPEWQDHAREEIMGLFRKNKPDYEGLSRLKIVTMIFYEVLRLHPPFIEIGWKTYKEMEIGGVTYPAGVSIKIPVLFIHHDPDSWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLESKMALCLILQRLEFELAPSYTHAPHTMVTLHPMHGAQMKVRAI |
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| Function | Cytochrome P450 72A15 [UniProtKB/Swiss-Prot:Q9LUC5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0602200 | OsNip_01t0602200-01 | Chr01 | 23663277 | 23664196 | - | RAP2018-11-26 | ||
| CDS seq | TCTTTGCCTATTGAGAACAACCGGAAGATGCATCAAATAAATAAAGAGATCGAATCGATTCTAAGAGGTTTAATTGGGAAAAGAATGCAAGCTATGAAAGAAGGTGAAAGCACAAAAGATGATTTACTTGGCATATTGCTTGAGTCAAACACAAAGCACATGGAAGAGAATGGTCAATCAAGCCAGGGGTTGACAATCAAGGATATCGTGGAGGAGTGCAAGCTGTTCTACTTTGCAGGAGCGGAGACAACATCAGTGCTTCTCACATGGACCATGCTGCTATTAAGCATACACCCGGAGTGGCAGGACCATGCAAGGGAAGAGATTATGGGATTATTTAGGAAGAACAAACCTGACTACGAAGGCTTGAGCCGCCTCAAAATTGTGACAATGATCTTCTACGAGGTTCTTCGGTTGCACCCACCGTTCATCGAGATTGGTTGGAAAACATACAAAGAGATGGAGATAGGAGGAGTCACTTACCCAGCTGGTGTTAGCATTAAAATCCCCGTGTTGTTCATCCACCATGATCCGGACTCATGGGGAAGTGATGTGCATGAGTTCAAGCCTGAGAGGTTCTCTGAGGGGATCTCTAAGGCGTCTAAGGATCCGGGAGCATTCCTCCCATTCGGTTGGGGGCCACGAATCTGCATCGGCCAAAACTTCGCGCTGCTTGAGTCCAAGATGGCATTGTGCCTGATTCTTCAACGCTTGGAGTTTGAGCTTGCGCCATCATATACTCATGCGCCGCATACTATGGTAACTCTGCATCCAATGCACGGTGCACAGATGAAAGTTAGAGCTATATGA
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| Protein seq | SLPIENNRKMHQINKEIESILRGLIGKRMQAMKEGESTKDDLLGILLESNTKHMEENGQSSQGLTIKDIVEECKLFYFAGAETTSVLLTWTMLLLSIHPEWQDHAREEIMGLFRKNKPDYEGLSRLKIVTMIFYEVLRLHPPFIEIGWKTYKEMEIGGVTYPAGVSIKIPVLFIHHDPDSWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLESKMALCLILQRLEFELAPSYTHAPHTMVTLHPMHGAQMKVRAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0602400 | SBH | 6.363934 | 4.809669 | 2.796535 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0602200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0026010 | SBH | 0.380584 | 1.018520 | 0.660300 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023950 | SBH | 0.255419 | 1.194231 | 4.003400 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024230 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023620 | SBH | 0.424099 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023380 | RBH | 5.186004 | 2.093777 | 1.716186 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0420900 | SBH | 12.2575155 | 6.776026 | 0.45269 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023290 | RBH | 0.0 | 1.474855 | 0.417657 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0409800 | RBH | 1.3210485 | 4.3304605 | 0.3144385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0024990 | SBH | 0.053336 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023260 | RBH | 0.085755 | 1.744840 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023530 | SBH | 4.089728 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023520 | RBH | 0.064851 | 0.035976 | 0.053111 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023450 | SBH | 0.515966 | 0.315297 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025350 | SBH | 0.087947 | 0.756523 | 0.201044 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0025100 | SBH | 0.0 | 0.000000 | 0.227597 |
