Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_08g0006270 | OGI:08015860 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr08:5985369-5992822 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agcagagagacagacagacagacagacacagacagagtgatcagagcgagctagagagacaaagagatgatgaggagacgctgcagcagcagcagcggccatggtggtcatcagctcatcctgtgctggctggtgatcgcgtgctcatgggttgcagtagctcgagctcaggctcagaagccggcaggagcaacaactgatccagtcgaaggtatgcatgttatcagttaattacatgcattattgcattcacagattacagagacaccgctgttcttttctgctggagagatgttcttggagaaaagacatagattttcatggttgcacacatgcatgttcctctcttcttcccattttctttgagacttcggagttcagagagacatggcttatgagttatgactactacatgcttgatgatgcttccttgtttgtagtagcatctaccatgggttacagttgatgctaacttgcaacagattacagttgaagctcgtaatattttggggtctctaatttttggaggttcagagatgggcctggatcttcttgagaaaagacagacttgcatagatataattgatgcaacttgtatagatataatttttggatgagatcaccctgttgtttcataacagcatgcatgttgcgtagtatcttctttccttttccttgcgactttagagagacatgaaacttactacatgtttgatgagttgatgtgtagcatttagcatggatataattgatgcaacttgcaagttgcaacagcttagagacaaattagcagttagcagtgagagttaatcctcggatattattaattcgttcctttcttggccgtttactgttttttttttaattgaagagaagaccaaaggtcagaacacccacgttttgtgatgaacagtaaaagaaaaagttcagagcaagaattccatcattacggcgatgaacagcatcaggcatcttctcttttccaagttcaatgatcaagttcaagtttgatacaccatctaaatctttgcttcttcctgctgtttctgttttcttgaccaatggaggagaggagttcagtttggtgtggttggtgaccgttaaaaaatcaattttttctctgtttgtgatgttgttttttcacctctgTtttttggctagtcttctcttcacacacactttctccgtttcatattataagtcgtcgtaactaaattttgttgagtttgaccaagttttcatattataagttgttttgacttttttttatcgtgacaaagtttatagaaaaaattaggaacatttaacatgataaattaatttcattaaatctgacattgaatatattttgataataagtttgtttttcttaaaagaactactatatttttattataaatttagtcaaacttattaaaaaaaataagactatgtttatttgataataataacttaattaaataagtttgattagAaaaaaaaaaatcaaagaaacggcgagaataaagggtaaagaaattgattggattcgtgtgcaaatgtcaacgcagtggcggcgctgaacgcgattctggggagatggggaacgaagccgcccaagacgtggaacatcaccggcggcgacccctgcaccggcaccgccgtcgacgacaccgacatcgacaacaatcccatcgtcaaccccggcatcaagtgcgactgcacattcaacaacaacaccgtctgccgcatcgtcaagctgtacgtatcatcccctgaacccaacctctcgtctcggctgcacgcaaggtgttcgacgcattgcctgactgaaacagagagaggccatgcgatcctccgaaattaggatgctagtagttgcacaagtatgaagtgatggtgaattggatttggatacttgtgcacagttgcactatcatcaaatttcgtttagcaaaagcatctgctgctgcgatagcgttttcatcttgttgccatccgaggaattttactggtgatgtttacgcaggagggtgtacgcgctgaatgttgtcggtcagatacctgcagagctggagaaactcacccatctagctaacttgtatggtgcctaactctttttgtctgtcttgatgatggaacacatgtctgtcttaacatttgatgatcgaacacaatctgttgaacgatgtttctgcagtaaatactaattcaatcccattctttgaacattcaattgtcacttgccagacaaaacacggataaatagatatcagaaatcaggtatacaattcctttttgtactctgtctaacttgcttggcgattcttatgttgtttcagaaacctgatgcaaaattacttgactggtcctgtgccatcattctttggcaaatttcccatgcagtacttgtaagagttaaattccaagttatatatttttgtaccatccaatatctgctggtgctttctcttaatcatctttctttctttctttcttgttttattttaaaaaggagcttagcaatcaatccattatctggaccacttccaaaggaacttgggaacctcacaaatctcatctcattgtaagatatcccttccacgatttctcatgttacttaatcatttcaatttcattttccttttcaagtgtgtttaatatactgaaacccaaacaacgaagtctcaaaagtggtggatattatggattaacactgttgcagacaaataagttatgttactcaactatttccttttgtttcagaggtatcagcctgaacaattttactggtaaccttcctgaagaattgggcaacttgaccaaactcgagcaaatgtaaatctcccccctcccccctttaattaaccagtagaacactacttcagaaagaactgacaagcaagatctatatggttgaacatgctaactactatgtttcaataacaggtatattgatagttctggcttctctggtccattcccttcgacaatttcaaaacttaagaagctgaagatcctgtacattcaagaactgagccacagttattatgtttattgtgtattcatacgctcaatgctatatatgttgttgtgcttgcaggtggatatcagataatgatttcacagggaaaatacctgattttattgggagcttgactaacttggaggatttgtaagatttttgtcaacctcttaatgtaatcatttattatatcctatcaaggagatgaatagaaatcttgaaacataacttttctgtatgtattcttttcatttgaattaagaggacaacgttattcattttttagtcctcaccttcgacataaatgctacgttatgaataaatttacattttctttatctattcatgcaagatgttgaaatgtatatcttaaggtggactttacatcttcctaatttcttaaagcatgaacttgtaggaggttgcaaggaaattcttttcaaggtccgatcccagcaagtttttctaagttaaccaagttgacaagcttgtaagtattctgttctttggccacatttgtcccttgactgttgggaaggccaaacttgtcttaataatgctaaatacacatatgcagacggatcggtgatattgtaaatgggagctcttcattggcctttattagcaacctgacgtccttaaatgtcctgtatgtgacctgcttttaagttctaacgatagatattattgTtttttttattgcaaagtactattggagtagtattttctgagacaacatattctttgtttcagaatattgaggaactgcaagatatccgataatcttggagcagtaaattttactaagctttctggattaaccttgctgtaggttttgtctttatggcatactgactatttatgttattagttattgtttctcatagtttcatgtgaagtgtttactcaagtaatattgctaaacatatggcacagggacttgagttttaacaacatcacgggcgaagttcctcagtccatccttaatctgaacagccttcgatatttgtaaggaattcttttatggcgattatttctgttatagaaatacatcttaagctgatgtccatgcctcatcgtgttgaatggtaactcaattcaggtttcttgggaacaatagccttacaggaagcctgccagatgtgaagagctcctcactaaacaatttgtatgctaaaatgattttcagcattgcaatgatatattcatttcatacgttggtaatcctaggctttttgcagagatttttcgcacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgtaagttgaaagttctgaaatttcagacgaatatatattgatttagacactctctacattatgtgaaattattgcctgacaagttagacgtatttttttgtacaaggaatttggtggcaaacaaatttaatattcgaagcaacaacgataggtacctataacatatttgcaaatatttatttttgacgacaccttcctcataatttttatttcttgtttctgttatgcgcacagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatgtatatttttgcactcttcatcgattttagcatttaagaaaatatctcaggattttcaataaaaggttataattttgttcatcttaactgcatgcagactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtctccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccaggtacatattgagcgcatagtacaataattcgattacctattttgtaccctttattaacatatttgtttgtccaacttggcatctgcatagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggaccaatgatctctgcactaagtatcactccaagtaagctcagtaaccgaattagttaacttgaagaatgtatgatagTttttttttctgattactgaaacacgttgtccagattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggcgtaattgctggcatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaaggtatcatttaagtgcagctctttaggtgccaaaattttcaaatgagttattctttctcatgtgttgtgaaaaaaaatgcagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagataatttcagttctcaaaatgtgattggagaaggcggatatgggccagtatataaggttagaggttcccacaagtcgtcaatcaatctatgaggacttaccttattgtgtactaactaaaattgttttgcaactcaactggtgtaaaatcaaaatatgtatgtaactcagggatctttctttgacagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccgagcactctttggtaagttcagttgtgcgaccttcttcctttcatgtactgtcaagaacttttcttctctgcataataccatcatctcaattctcaaggccttatttctccatgttcaggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgaaccccaaaatctccgattttggacttgccaagctctatgatgagaagaagacccatatcagcacgaaaatcgctggcacattgtatgcatatttcaccctttcttttcttatgagtttacttttgaagtctaagctaattttatcttatctggcccttttgaagcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagagacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggtaagttgatcaatggtctttgcatccaagaaaatacattggctgattctatttctcacaatcaacacgatgtctgtatgttactttatactaggcttgggggctatacgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagcctcgagagtcatctatgccgcactcctgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttaccggagacattgagatgactgaaatgctgacgaagccgagctacatcactgagtggcaactcagaggagggaataccagctatgtaagcagcaactacagctctggatctactactggtgagtttagagagcagagggagacttccccactcaccccttctccaacgataaccagagtcacatatgatggaaggtgaatgcaaatatttttggttttagcttcaagtgatatttttggacattgtggagttgcaacaaatatatcgaattttttgttctgaatattttccatactcataacccagtcatcttggtaatttgtatatgccagttgtatttgcatgggtgcttttaaattcatttagcactgaattttttttttgagaaatgactgacgaatttgttggctagagcacacttctgtaataaaaaatgcttggtactgcataaattaattacaatgaatggc
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| CDS seq | atgatgaggagacgctgcagcagcagcagcggccatggtggtcatcagctcatcctgtgctggctggtgatcgcgtgctcatgggttgcagtagctcgagctcaggctcagaagccggcaggagcaacaactgatccagtcgaagtggcggcgctgaacgcgattctggggagatggggaacgaagccgcccaagacgtggaacatcaccggcggcgacccctgcaccggcaccgccgtcgacgacaccgacatcgacaacaatcccatcgtcaaccccggcatcaagtgcgactgcacattcaacaacaacaccgtctgccgcatcgtcaagctgagggtgtacgcgctgaatgttgtcggtcagatacctgcagagctggagaaactcacccatctagctaacttaaacctgatgcaaaattacttgactggtcctgtgccatcattctttggcaaatttcccatgcagtacttgagcttagcaatcaatccattatctggaccacttccaaaggaacttgggaacctcacaaatctcatctcattaggtatcagcctgaacaattttactggtaaccttcctgaagaattgggcaacttgaccaaactcgagcaaatgtatattgatagttctggcttctctggtccattcccttcgacaatttcaaaacttaagaagctgaagatcctgtggatatcagataatgatttcacagggaaaatacctgattttattgggagcttgactaacttggaggatttgaggttgcaaggaaattcttttcaaggtccgatcccagcaagtttttctaagttaaccaagttgacaagcttacggatcggtgatattgtaaatgggagctcttcattggcctttattagcaacctgacgtccttaaatgtcctaatattgaggaactgcaagatatccgataatcttggagcagtaaattttactaagctttctggattaaccttgctggacttgagttttaacaacatcacgggcgaagttcctcagtccatccttaatctgaacagccttcgatatttgtttcttgggaacaatagccttacaggaagcctgccagatgtgaagagctcctcactaaacaatttagatttttcgcacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgaatttggtggcaaacaaatttaatattcgaagcaacaacgatagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtctccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggaccaatgatctctgcactaagtatcactccaaattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggcgtaattgctggcatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagataatttcagttctcaaaatgtgattggagaaggcggatatgggccagtatataagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccgagcactctttggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgaaccccaaaatctccgattttggacttgccaagctctatgatgagaagaagacccatatcagcacgaaaatcgctggcacattcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagagacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggcttgggggctatacgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagcctcgagagtcatctatgccgcactcctgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttaccggagacattgagatgactgaaatgctgacgaagccgagctacatcactgagtggcaactcagaggagggaataccagctatgtaagcagcaactacagctctggatctactactggtgagtttagagagcagagggagacttccccactcaccccttctccaacgataaccagagtcacatatgatggaaggtga
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| Protein seq | MMRRRCSSSSGHGGHQLILCWLVIACSWVAVARAQAQKPAGATTDPVEVAALNAILGRWGTKPPKTWNITGGDPCTGTAVDDTDIDNNPIVNPGIKCDCTFNNNTVCRIVKLRVYALNVVGQIPAELEKLTHLANLNLMQNYLTGPVPSFFGKFPMQYLSLAINPLSGPLPKELGNLTNLISLGISLNNFTGNLPEELGNLTKLEQMYIDSSGFSGPFPSTISKLKKLKILWISDNDFTGKIPDFIGSLTNLEDLRLQGNSFQGPIPASFSKLTKLTSLRIGDIVNGSSSLAFISNLTSLNVLILRNCKISDNLGAVNFTKLSGLTLLDLSFNNITGEVPQSILNLNSLRYLFLGNNSLTGSLPDVKSSSLNNLDFSHNQLMGNFPSWATNNNLQLNLVANKFNIRSNNDSILPSGLNCLQQDTPCFLGSPEYYSFAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNVGKFNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYTVLLQFAEFAYPDTKTWQSIGRRVFDIYVQGDLKEKNFDVRKTAGGKSFIAVNKRYNATVSKNFLEIHLFWAGKGTCCIPTQGYYGPMISALSITPNFTPTVRNGVPKKKSKAGVIAGIVIGASVIGSAALLGIFVLVKKRRKAARQQEELYNLVGRPNIFSSAELKLATDNFSSQNVIGEGGYGPVYKGKLPDGRIIAVKQLSQSSHQGKSEFVTEVATISAVQHKNLVKLYGCCIDSSTPLLVYEYLENGSLDRALFGHGSLNLDWPTRFEIILGIARGITYLHEESSIRIVHRDIKASNVLLDTDLNPKISDFGLAKLYDEKKTHISTKIAGTFGYLAPEYAMRGHLTEKADVFAFGVVALETVAGRSNTDNSLDNDKIYLFEWAWGLYEREQGIKIVDPKLDEFDSEEASRVIYAALLCTQGSPHQRPPMSRVLAILTGDIEMTEMLTKPSYITEWQLRGGNTSYVSSNYSSGSTTGEFREQRETSPLTPSPTITRVTYDGR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0006270 | OsNaBo_08g0006270.01 | Chr08 | 5985369 | 5992822 | + | NAM | ||
| CDS seq | atgatgaggagacgctgcagcagcagcagcggccatggtggtcatcagctcatcctgtgctggctggtgatcgcgtgctcatgggttgcagtagctcgagctcaggctcagaagccggcaggagcaacaactgatccagtcgaagtggcggcgctgaacgcgattctggggagatggggaacgaagccgcccaagacgtggaacatcaccggcggcgacccctgcaccggcaccgccgtcgacgacaccgacatcgacaacaatcccatcgtcaaccccggcatcaagtgcgactgcacattcaacaacaacaccgtctgccgcatcgtcaagctgagggtgtacgcgctgaatgttgtcggtcagatacctgcagagctggagaaactcacccatctagctaacttaaacctgatgcaaaattacttgactggtcctgtgccatcattctttggcaaatttcccatgcagtacttgagcttagcaatcaatccattatctggaccacttccaaaggaacttgggaacctcacaaatctcatctcattaggtatcagcctgaacaattttactggtaaccttcctgaagaattgggcaacttgaccaaactcgagcaaatgtatattgatagttctggcttctctggtccattcccttcgacaatttcaaaacttaagaagctgaagatcctgtggatatcagataatgatttcacagggaaaatacctgattttattgggagcttgactaacttggaggatttgaggttgcaaggaaattcttttcaaggtccgatcccagcaagtttttctaagttaaccaagttgacaagcttacggatcggtgatattgtaaatgggagctcttcattggcctttattagcaacctgacgtccttaaatgtcctaatattgaggaactgcaagatatccgataatcttggagcagtaaattttactaagctttctggattaaccttgctggacttgagttttaacaacatcacgggcgaagttcctcagtccatccttaatctgaacagccttcgatatttgtttcttgggaacaatagccttacaggaagcctgccagatgtgaagagctcctcactaaacaatttagatttttcgcacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgaatttggtggcaaacaaatttaatattcgaagcaacaacgatagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtctccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggaccaatgatctctgcactaagtatcactccaaattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggcgtaattgctggcatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagataatttcagttctcaaaatgtgattggagaaggcggatatgggccagtatataagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccgagcactctttggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgaaccccaaaatctccgattttggacttgccaagctctatgatgagaagaagacccatatcagcacgaaaatcgctggcacattcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagagacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggcttgggggctatacgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagcctcgagagtcatctatgccgcactcctgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttaccggagacattgagatgactgaaatgctgacgaagccgagctacatcactgagtggcaactcagaggagggaataccagctatgtaagcagcaactacagctctggatctactactggtgagtttagagagcagagggagacttccccactcaccccttctccaacgataaccagagtcacatatgatggaaggtga
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| Protein seq | MMRRRCSSSSGHGGHQLILCWLVIACSWVAVARAQAQKPAGATTDPVEVAALNAILGRWGTKPPKTWNITGGDPCTGTAVDDTDIDNNPIVNPGIKCDCTFNNNTVCRIVKLRVYALNVVGQIPAELEKLTHLANLNLMQNYLTGPVPSFFGKFPMQYLSLAINPLSGPLPKELGNLTNLISLGISLNNFTGNLPEELGNLTKLEQMYIDSSGFSGPFPSTISKLKKLKILWISDNDFTGKIPDFIGSLTNLEDLRLQGNSFQGPIPASFSKLTKLTSLRIGDIVNGSSSLAFISNLTSLNVLILRNCKISDNLGAVNFTKLSGLTLLDLSFNNITGEVPQSILNLNSLRYLFLGNNSLTGSLPDVKSSSLNNLDFSHNQLMGNFPSWATNNNLQLNLVANKFNIRSNNDSILPSGLNCLQQDTPCFLGSPEYYSFAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNVGKFNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYTVLLQFAEFAYPDTKTWQSIGRRVFDIYVQGDLKEKNFDVRKTAGGKSFIAVNKRYNATVSKNFLEIHLFWAGKGTCCIPTQGYYGPMISALSITPNFTPTVRNGVPKKKSKAGVIAGIVIGASVIGSAALLGIFVLVKKRRKAARQQEELYNLVGRPNIFSSAELKLATDNFSSQNVIGEGGYGPVYKGKLPDGRIIAVKQLSQSSHQGKSEFVTEVATISAVQHKNLVKLYGCCIDSSTPLLVYEYLENGSLDRALFGHGSLNLDWPTRFEIILGIARGITYLHEESSIRIVHRDIKASNVLLDTDLNPKISDFGLAKLYDEKKTHISTKIAGTFGYLAPEYAMRGHLTEKADVFAFGVVALETVAGRSNTDNSLDNDKIYLFEWAWGLYEREQGIKIVDPKLDEFDSEEASRVIYAALLCTQGSPHQRPPMSRVLAILTGDIEMTEMLTKPSYITEWQLRGGNTSYVSSNYSSGSTTGEFREQRETSPLTPSPTITRVTYDGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0006270 | OsNaBo_08g0006270.02 | Chr08 | 5985369 | 5992810 | + | NAM | ||
| CDS seq | atgatgaggagacgctgcagcagcagcagcggccatggtggtcatcagctcatcctgtgctggctggtgatcgcgtgctcatgggttgcagtagctcgagctcaggctcagaagccggcaggagcaacaactgatccagtcgaagtggcggcgctgaacgcgattctggggagatggggaacgaagccgcccaagacgtggaacatcaccggcggcgacccctgcaccggcaccgccgtcgacgacaccgacatcgacaacaatcccatcgtcaaccccggcatcaagtgcgactgcacattcaacaacaacaccgtctgccgcatcgtcaagctgtacgtatcatcccctgaacccaacctctcgtctcggctgcacgcaaggagggtgtacgcgctgaatgttgtcggtcagatacctgcagagctggagaaactcacccatctagctaacttaaacctgatgcaaaattacttgactggtcctgtgccatcattctttggcaaatttcccatgcagtacttgagcttagcaatcaatccattatctggaccacttccaaaggaacttgggaacctcacaaatctcatctcattaggtatcagcctgaacaattttactggtaaccttcctgaagaattgggcaacttgaccaaactcgagcaaatgtatattgatagttctggcttctctggtccattcccttcgacaatttcaaaacttaagaagctgaagatcctgtggatatcagataatgatttcacagggaaaatacctgattttattgggagcttgactaacttggaggatttacggatcggtgatattgtaaatgggagctcttcattggcctttattagcaacctgacgtccttaaatgtcctaatattgaggaactgcaagatatccgataatcttggagcagtaaattttactaagctttctggattaaccttgctggacttgagttttaacaacatcacgggcgaagttcctcagtccatccttaatctgaacagccttcgatatttgtttcttgggaacaatagccttacaggaagcctgccagatgtgaagagctcctcactaaacaatttagatttttcgcacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgaatttggtggcaaacaaatttaatattcgaagcaacaacgatagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtctccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggaccaatgatctctgcactaagtatcactccaaattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggcgtaattgctggcatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagataatttcagttctcaaaatgtgattggagaaggcggatatgggccagtatataagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccgagcactctttggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgaaccccaaaatctccgattttggacttgccaagctctatgatgagaagaagacccatatcagcacgaaaatcgctggcacattcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagagacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggcttgggggctatacgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagcctcgagagtcatctatgccgcactcctgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttaccggagacattgagatgactgaaatgctgacgaagccgagctacatcactgagtggcaactcagaggagggaataccagctatgtaagcagcaactacagctctggatctactactggtgagtttagagagcagagggagacttccccactcaccccttctccaacgataaccagagtcacatatgatggaaggtga
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| Protein seq | MMRRRCSSSSGHGGHQLILCWLVIACSWVAVARAQAQKPAGATTDPVEVAALNAILGRWGTKPPKTWNITGGDPCTGTAVDDTDIDNNPIVNPGIKCDCTFNNNTVCRIVKLYVSSPEPNLSSRLHARRVYALNVVGQIPAELEKLTHLANLNLMQNYLTGPVPSFFGKFPMQYLSLAINPLSGPLPKELGNLTNLISLGISLNNFTGNLPEELGNLTKLEQMYIDSSGFSGPFPSTISKLKKLKILWISDNDFTGKIPDFIGSLTNLEDLRIGDIVNGSSSLAFISNLTSLNVLILRNCKISDNLGAVNFTKLSGLTLLDLSFNNITGEVPQSILNLNSLRYLFLGNNSLTGSLPDVKSSSLNNLDFSHNQLMGNFPSWATNNNLQLNLVANKFNIRSNNDSILPSGLNCLQQDTPCFLGSPEYYSFAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNVGKFNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYTVLLQFAEFAYPDTKTWQSIGRRVFDIYVQGDLKEKNFDVRKTAGGKSFIAVNKRYNATVSKNFLEIHLFWAGKGTCCIPTQGYYGPMISALSITPNFTPTVRNGVPKKKSKAGVIAGIVIGASVIGSAALLGIFVLVKKRRKAARQQEELYNLVGRPNIFSSAELKLATDNFSSQNVIGEGGYGPVYKGKLPDGRIIAVKQLSQSSHQGKSEFVTEVATISAVQHKNLVKLYGCCIDSSTPLLVYEYLENGSLDRALFGHGSLNLDWPTRFEIILGIARGITYLHEESSIRIVHRDIKASNVLLDTDLNPKISDFGLAKLYDEKKTHISTKIAGTFGYLAPEYAMRGHLTEKADVFAFGVVALETVAGRSNTDNSLDNDKIYLFEWAWGLYEREQGIKIVDPKLDEFDSEEASRVIYAALLCTQGSPHQRPPMSRVLAILTGDIEMTEMLTKPSYITEWQLRGGNTSYVSSNYSSGSTTGEFREQRETSPLTPSPTITRVTYDGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr08 | 5988522 | 5988950 | + | OsNaBo_08g0006270.01 | OsNaBo_08g0006270.01,OsNaBo_08g0006270.02 | All |
| A5 | Chr08 | 5987108 | 5987377 | + | OsNaBo_08g0006270.02 | OsNaBo_08g0006270.01,OsNaBo_08g0006270.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.924928 | 16.056192 | 0.683328 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0203300 | RBH | 0.758614 | 0.490087 | 0.336274 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g10300 | RBH | 0.489236 | 0.354496 | 0.087303 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0203300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0006630 | RBH | 0.050981 | 15.893945 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0006570 | RBH | 0.166079 | 1.160552 | 0.314576 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006700 | RBH | 0.232678 | 3.023202 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006550 | RBH | 0.144151 | 0.267361 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0006590 | RBH | 0.882611 | 7.205217 | 0.622384 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0091400 | SBH | 10.8169235 | 14.028789 | 0.731616 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0006310 | RBH | 0.312493 | 0.230578 | 0.308257 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0094100 | SBH | 7.2143315 | 14.259834 | 5.57544 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0006250 | RBH | 0.020270 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0006310 | RBH | 0.039458 | 1.308960 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0006340 | SBH | 0.000000 | 4.792430 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0006590 | RBH | 0.016456 | 0.100886 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0006350 | RBH | 0.000000 | 3.166907 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G006420 | RBH | 0.051513 | 0.727958 | 0.293259 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0025890 | SBH | 5.244827 | 65.479820 | 3.933135 |
