Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_06g0020790 OGI:06063770 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr06:23814155-23817838
Gene Symbol -
DNA seq

atggcctatttgagggttgtctctattggttgcctttatctatttgatttcttatgcttcctaccaatagccatgagtgaccaaactgagacagatcgacacgctctccTttgcttcaagtcgcagctctcaggtccaactgtagttctagcctcatggagcaacgcatccttggagcattgcaactggcatggagtcacatgcagcatgagagttcctcgccgtgttatcgccattgatctcccatccgaaggcatcataggcccaaTatcaccttgtattgccaacatcacctctcttacaaGgctgcaactatcaaacaatagtttccatggtggcataccgtctgagctcggcctcctgaaccaactcagaaaCcttaacctcagcaggaattccctagaaggtaacataccatcagaactctcttcatgttcacaacttcagatcctagatctgcagagcaattccctgcaaggagagattCcaccaagtctaagtcaatgtgttcatcttgaaagaattttccttgccaacaacaagctccaagggagaatcccctctgcttttggggaccttcctaaactgcgtgtacttttcctggctaacaacagactttcaggtgacataccaccctctttgggtagcagccttacgctcacatatgtcaatcttgggaacaatgctctcaccggaggggtaccaaagcccatgttaaatagttcatctttgcaacaactcattctcaatagcaatagtctcagtggagaactcccaaaggctctactcaacacgttgtcacttatcagcatttacctcaaccagaacaatttttccggttctataccacctgttAaaaccgtgtctccacaagttcaatatcttgaTttaggagaaaactgtctcacAGGaacaataccttcctctgttgggaacctttcctccctactttatcttcgtctttcacagaattgtttagatgggagcataccagagagcttaggacaTattccaACActagaagaattgaacttgAatttaaacaacttttctggagcagttccaccatctctcttcaatatgtcatccctgacatctctggtggcggcaaataactcactcaccggaagattacctctagacatcggctatacActcccaaacattgaaggcttaattctttcagcaaataagTttaagggctcaatcccaacttcccttctcaatttaacccatctacaaatgctatacctagctgacaacaagttaactgggatcatgccatcctttggatcactgacaaacttggaggaccttgacgtggcatacaacatgctagaagcaggcgactggggctttatctcgtcactttcaaattgcacaagattgactaagctgatgttggatgggaacaatcttcaaggaaatctgccaagttctgtaggcaatctgtctagtgatctccaaagattgtggctaacaaataataaaaTTtccggacctataccacaagagataggcaatcttaagagcctcactgaattgtacatggattacaatcaattgtcagaaaaaatacctctaacaatcggaaatttgcgcaaattaggcaaactgtcctttgctcgaaacagactctctggtcaaatcccagatgacattgggaaacttgttcagctgaatAatctaaatttggattggaacaacttgagtggaagcatacctgtgagtatagggtattgtactcaactcgaaatactcAaccttgctcacaattcactagatggaacaataccagagacgatctttaaaatttcttcactttcaatagtgttagacttgtcatacaattacttgtccggaagcatatcagatgaagtaggcaaccttgtcagtctgaatAagctcatcatttcatacaacagattgtctggagatatcccatccactcttagtcaatgcgtggttctagagtatcttgagatgcaaagcaatttctttgtaggaagcattccgcaaacatttgtgaacatggtaggcatcAaggtgatggatatatctcataacaatttatcaggagaaattccacagtttctaacgttgttacattctttgcaagttctcaacttatcattcaataaTtttgatggagcagtgccaaccagtggtatttttgccaatgctagtgtggtatcaaTtgaaggaaatgattatctgtgcacaaaaactccaatgagaggtgtgcctctttgttcaaaatcggTtgacaagaaaaggaaccataggtcattggttctagtcctaacgacagtaataccaattgttgctatcacTttcactttgttatgccttgcaaaatatatttggacgaagagaatgcaagcagagccacatgtacaacagctgaatgagcacaggaacataacgtatgaagatgttctaaaggccacaaatagattctcttcAactaacttacttggctcaggatcatttggaacagtttataagggcaatctgcatcttcctttcaaagaaaaggacaatctgcatcttcaggaagaacatatcgccatcaagatttttaaccttgatatccatggatctaataagagctttgttgccgagtgtgaaaccctacaaaatgtccgccaccgaaatctcgtgaaaattaTtactctatgctcttctgtggattcaactGgggcagacttcaaggctatagtgttCccatattttccaaatgggaacctagatatgtggttacatccaaaatcccatgaacatattagtcaaacaaaggtgctgactttaagacaaagaattaatatagccttggatgtagcacttgctttggattatcttcataaccagtgtgaattgccattagtacattgtgatttgaagccaagcaatattctgttggatagtgacatggttgcacacgtcagtgactttggcttagcaagATttgtatacactagatcaaacgcacatcaatataCATcaacaagcttggcttgtctaaaaggatctattggatatattccaccaggtgagataagctaaTttttaagttgataaTtctgtttaatgatacacgtggtgtctggtttctaaTtttatgacttctgtaaatctaaaTgcagagtatggcatgagcaaagatatctcaaccAagggtgatgtctacagcttcggaatccttctcttagaaatggtaacaggtagtagtcctattgatgaaaaatttaatggtggcactaccctgcatgaatttgttgatgcagcattgtccaatagcattcacgaggttgttgatcccacaatgctacaagatgatgtcagtgtagccgatgtaatGgagaggtgtgtcattccattggttAaaataggcctctcatgttcaatggcattgcctagagagcggccagaaatggggcaagtttctaacatgattcttcgaatcaagcatgcagcctcaaacatgagcgtcaaatgaggcaaattaagatttggcaatttcatgtatggaagaataatgtaatgtaacatatttgtagcTtttgttttgttttctaatccaatgtagttagtgttcaaatgaggcaaattAagatttggcaatttcatgtatggaagaataatataatgtaacatatttgtagcttttgtgttgttttctaa

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CDS seq

atggcctatttgagggttgtctctattggttgcctttatctatttgatttcttatgcttcctaccaatagccatgagtgaccaaactgagacagatcgacacgctctccTttgcttcaagtcgcagctctcaggtccaactgtagttctagcctcatggagcaacgcatccttggagcattgcaactggcatggagtcacatgcagcatgagagttcctcgccgtgttatcgccattgatctcccatccgaaggcatcataggcccaaTatcaccttgtattgccaacatcacctctcttacaaGgctgcaactatcaaacaatagtttccatggtggcataccgtctgagctcggcctcctgaaccaactcagaaaCcttaacctcagcaggaattccctagaaggtaacataccatcagaactctcttcatgttcacaacttcagatcctagatctgcagagcaattccctgcaaggagagattCcaccaagtctaagtcaatgtgttcatcttgaaagaattttccttgccaacaacaagctccaagggagaatcccctctgcttttggggaccttcctaaactgcgtgtacttttcctggctaacaacagactttcaggtgacataccaccctctttgggtagcagccttacgctcacatatgtcaatcttgggaacaatgctctcaccggaggggtaccaaagcccatgttaaatagttcatctttgcaacaactcattctcaatagcaatagtctcagtggagaactcccaaaggctctactcaacacgttgtcacttatcagcatttacctcaaccagaacaatttttccggttctataccacctgttAaaaccgtgtctccacaagttcaatatcttgaTttaggagaaaactgtctcacAGGaacaataccttcctctgttgggaacctttcctccctactttatcttcgtctttcacagaattgtttagatgggagcataccagagagcttaggacaTattccaACActagaagaattgaacttgAatttaaacaacttttctggagcagttccaccatctctcttcaatatgtcatccctgacatctctggtggcggcaaataactcactcaccggaagattacctctagacatcggctatacActcccaaacattgaaggcttaattctttcagcaaataagTttaagggctcaatcccaacttcccttctcaatttaacccatctacaaatgctatacctagctgacaacaagttaactgggatcatgccatcctttggatcactgacaaacttggaggaccttgacgtggcatacaacatgctagaagcaggcgactggggctttatctcgtcactttcaaattgcacaagattgactaagctgatgttggatgggaacaatcttcaaggaaatctgccaagttctgtaggcaatctgtctagtgatctccaaagattgtggctaacaaataataaaaTTtccggacctataccacaagagataggcaatcttaagagcctcactgaattgtacatggattacaatcaattgtcagaaaaaatacctctaacaatcggaaatttgcgcaaattaggcaaactgtcctttgctcgaaacagactctctggtcaaatcccagatgacattgggaaacttgttcagctgaatAatctaaatttggattggaacaacttgagtggaagcatacctgtgagtatagggtattgtactcaactcgaaatactcAaccttgctcacaattcactagatggaacaataccagagacgatctttaaaatttcttcactttcaatagtgttagacttgtcatacaattacttgtccggaagcatatcagatgaagtaggcaaccttgtcagtctgaatAagctcatcatttcatacaacagattgtctggagatatcccatccactcttagtcaatgcgtggttctagagtatcttgagatgcaaagcaatttctttgtaggaagcattccgcaaacatttgtgaacatggtaggcatcAaggtgatggatatatctcataacaatttatcaggagaaattccacagtttctaacgttgttacattctttgcaagttctcaacttatcattcaataaTtttgatggagcagtgccaaccagtggtatttttgccaatgctagtgtggtatcaaTtgaaggaaatgattatctgtgcacaaaaactccaatgagaggtgtgcctctttgttcaaaatcggTtgacaagaaaaggaaccataggtcattggttctagtcctaacgacagtaataccaattgttgctatcacTttcactttgttatgccttgcaaaatatatttggacgaagagaatgcaagcagagccacatgtacaacagctgaatgagcacaggaacataacgtatgaagatgttctaaaggccacaaatagattctcttcAactaacttacttggctcaggatcatttggaacagtttataagggcaatctgcatcttcctttcaaagaaaaggacaatctgcatcttcaggaagaacatatcgccatcaagatttttaaccttgatatccatggatctaataagagctttgttgccgagtgtgaaaccctacaaaatgtccgccaccgaaatctcgtgaaaattaTtactctatgctcttctgtggattcaactGgggcagacttcaaggctatagtgttCccatattttccaaatgggaacctagatatgtggttacatccaaaatcccatgaacatattagtcaaacaaaggtgctgactttaagacaaagaattaatatagccttggatgtagcacttgctttggattatcttcataaccagtgtgaattgccattagtacattgtgatttgaagccaagcaatattctgttggatagtgacatggttgcacacgtcagtgactttggcttagcaagATttgtatacactagatcaaacgcacatcaatataCATcaacaagcttggcttgtctaaaaggatctattggatatattccaccagagtatggcatgagcaaagatatctcaaccAagggtgatgtctacagcttcggaatccttctcttagaaatggtaacaggtagtagtcctattgatgaaaaatttaatggtggcactaccctgcatgaatttgttgatgcagcattgtccaatagcattcacgaggttgttgatcccacaatgctacaagatgatgtcagtgtagccgatgtaatGgagaggtgtgtcattccattggttAaaataggcctctcatgttcaatggcattgcctagagagcggccagaaatggggcaagtttctaacatgattcttcgaatcaagcatgcagcctcaaacatgagcgtcaaatga

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Protein seq

MAYLRVVSIGCLYLFDFLCFLPIAMSDQTETDRHALLCFKSQLSGPTVVLASWSNASLEHCNWHGVTCSMRVPRRVIAIDLPSEGIIGPISPCIANITSLTRLQLSNNSFHGGIPSELGLLNQLRNLNLSRNSLEGNIPSELSSCSQLQILDLQSNSLQGEIPPSLSQCVHLERIFLANNKLQGRIPSAFGDLPKLRVLFLANNRLSGDIPPSLGSSLTLTYVNLGNNALTGGVPKPMLNSSSLQQLILNSNSLSGELPKALLNTLSLISIYLNQNNFSGSIPPVKTVSPQVQYLDLGENCLTGTIPSSVGNLSSLLYLRLSQNCLDGSIPESLGHIPTLEELNLNLNNFSGAVPPSLFNMSSLTSLVAANNSLTGRLPLDIGYTLPNIEGLILSANKFKGSIPTSLLNLTHLQMLYLADNKLTGIMPSFGSLTNLEDLDVAYNMLEAGDWGFISSLSNCTRLTKLMLDGNNLQGNLPSSVGNLSSDLQRLWLTNNKISGPIPQEIGNLKSLTELYMDYNQLSEKIPLTIGNLRKLGKLSFARNRLSGQIPDDIGKLVQLNNLNLDWNNLSGSIPVSIGYCTQLEILNLAHNSLDGTIPETIFKISSLSIVLDLSYNYLSGSISDEVGNLVSLNKLIISYNRLSGDIPSTLSQCVVLEYLEMQSNFFVGSIPQTFVNMVGIKVMDISHNNLSGEIPQFLTLLHSLQVLNLSFNNFDGAVPTSGIFANASVVSIEGNDYLCTKTPMRGVPLCSKSVDKKRNHRSLVLVLTTVIPIVAITFTLLCLAKYIWTKRMQAEPHVQQLNEHRNITYEDVLKATNRFSSTNLLGSGSFGTVYKGNLHLPFKEKDNLHLQEEHIAIKIFNLDIHGSNKSFVAECETLQNVRHRNLVKIITLCSSVDSTGADFKAIVFPYFPNGNLDMWLHPKSHEHISQTKVLTLRQRINIALDVALALDYLHNQCELPLVHCDLKPSNILLDSDMVAHVSDFGLARFVYTRSNAHQYTSTSLACLKGSIGYIPPEYGMSKDISTKGDVYSFGILLLEMVTGSSPIDEKFNGGTTLHEFVDAALSNSIHEVVDPTMLQDDVSVADVMERCVIPLVKIGLSCSMALPRERPEMGQVSNMILRIKHAASNMSVK

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0020790 OsNaBo_06g0020790.01 Chr06 23814155 23817838 + NAM
CDS seq

atggcctatttgagggttgtctctattggttgcctttatctatttgatttcttatgcttcctaccaatagccatgagtgaccaaactgagacagatcgacacgctctccTttgcttcaagtcgcagctctcaggtccaactgtagttctagcctcatggagcaacgcatccttggagcattgcaactggcatggagtcacatgcagcatgagagttcctcgccgtgttatcgccattgatctcccatccgaaggcatcataggcccaaTatcaccttgtattgccaacatcacctctcttacaaGgctgcaactatcaaacaatagtttccatggtggcataccgtctgagctcggcctcctgaaccaactcagaaaCcttaacctcagcaggaattccctagaaggtaacataccatcagaactctcttcatgttcacaacttcagatcctagatctgcagagcaattccctgcaaggagagattCcaccaagtctaagtcaatgtgttcatcttgaaagaattttccttgccaacaacaagctccaagggagaatcccctctgcttttggggaccttcctaaactgcgtgtacttttcctggctaacaacagactttcaggtgacataccaccctctttgggtagcagccttacgctcacatatgtcaatcttgggaacaatgctctcaccggaggggtaccaaagcccatgttaaatagttcatctttgcaacaactcattctcaatagcaatagtctcagtggagaactcccaaaggctctactcaacacgttgtcacttatcagcatttacctcaaccagaacaatttttccggttctataccacctgttAaaaccgtgtctccacaagttcaatatcttgaTttaggagaaaactgtctcacAGGaacaataccttcctctgttgggaacctttcctccctactttatcttcgtctttcacagaattgtttagatgggagcataccagagagcttaggacaTattccaACActagaagaattgaacttgAatttaaacaacttttctggagcagttccaccatctctcttcaatatgtcatccctgacatctctggtggcggcaaataactcactcaccggaagattacctctagacatcggctatacActcccaaacattgaaggcttaattctttcagcaaataagTttaagggctcaatcccaacttcccttctcaatttaacccatctacaaatgctatacctagctgacaacaagttaactgggatcatgccatcctttggatcactgacaaacttggaggaccttgacgtggcatacaacatgctagaagcaggcgactggggctttatctcgtcactttcaaattgcacaagattgactaagctgatgttggatgggaacaatcttcaaggaaatctgccaagttctgtaggcaatctgtctagtgatctccaaagattgtggctaacaaataataaaaTTtccggacctataccacaagagataggcaatcttaagagcctcactgaattgtacatggattacaatcaattgtcagaaaaaatacctctaacaatcggaaatttgcgcaaattaggcaaactgtcctttgctcgaaacagactctctggtcaaatcccagatgacattgggaaacttgttcagctgaatAatctaaatttggattggaacaacttgagtggaagcatacctgtgagtatagggtattgtactcaactcgaaatactcAaccttgctcacaattcactagatggaacaataccagagacgatctttaaaatttcttcactttcaatagtgttagacttgtcatacaattacttgtccggaagcatatcagatgaagtaggcaaccttgtcagtctgaatAagctcatcatttcatacaacagattgtctggagatatcccatccactcttagtcaatgcgtggttctagagtatcttgagatgcaaagcaatttctttgtaggaagcattccgcaaacatttgtgaacatggtaggcatcAaggtgatggatatatctcataacaatttatcaggagaaattccacagtttctaacgttgttacattctttgcaagttctcaacttatcattcaataaTtttgatggagcagtgccaaccagtggtatttttgccaatgctagtgtggtatcaaTtgaaggaaatgattatctgtgcacaaaaactccaatgagaggtgtgcctctttgttcaaaatcggTtgacaagaaaaggaaccataggtcattggttctagtcctaacgacagtaataccaattgttgctatcacTttcactttgttatgccttgcaaaatatatttggacgaagagaatgcaagcagagccacatgtacaacagctgaatgagcacaggaacataacgtatgaagatgttctaaaggccacaaatagattctcttcAactaacttacttggctcaggatcatttggaacagtttataagggcaatctgcatcttcctttcaaagaaaaggacaatctgcatcttcaggaagaacatatcgccatcaagatttttaaccttgatatccatggatctaataagagctttgttgccgagtgtgaaaccctacaaaatgtccgccaccgaaatctcgtgaaaattaTtactctatgctcttctgtggattcaactGgggcagacttcaaggctatagtgttCccatattttccaaatgggaacctagatatgtggttacatccaaaatcccatgaacatattagtcaaacaaaggtgctgactttaagacaaagaattaatatagccttggatgtagcacttgctttggattatcttcataaccagtgtgaattgccattagtacattgtgatttgaagccaagcaatattctgttggatagtgacatggttgcacacgtcagtgactttggcttagcaagATttgtatacactagatcaaacgcacatcaatataCATcaacaagcttggcttgtctaaaaggatctattggatatattccaccagagtatggcatgagcaaagatatctcaaccAagggtgatgtctacagcttcggaatccttctcttagaaatggtaacaggtagtagtcctattgatgaaaaatttaatggtggcactaccctgcatgaatttgttgatgcagcattgtccaatagcattcacgaggttgttgatcccacaatgctacaagatgatgtcagtgtagccgatgtaatGgagaggtgtgtcattccattggttAaaataggcctctcatgttcaatggcattgcctagagagcggccagaaatggggcaagtttctaacatgattcttcgaatcaagcatgcagcctcaaacatgagcgtcaaatga

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Protein seq

MAYLRVVSIGCLYLFDFLCFLPIAMSDQTETDRHALLCFKSQLSGPTVVLASWSNASLEHCNWHGVTCSMRVPRRVIAIDLPSEGIIGPISPCIANITSLTRLQLSNNSFHGGIPSELGLLNQLRNLNLSRNSLEGNIPSELSSCSQLQILDLQSNSLQGEIPPSLSQCVHLERIFLANNKLQGRIPSAFGDLPKLRVLFLANNRLSGDIPPSLGSSLTLTYVNLGNNALTGGVPKPMLNSSSLQQLILNSNSLSGELPKALLNTLSLISIYLNQNNFSGSIPPVKTVSPQVQYLDLGENCLTGTIPSSVGNLSSLLYLRLSQNCLDGSIPESLGHIPTLEELNLNLNNFSGAVPPSLFNMSSLTSLVAANNSLTGRLPLDIGYTLPNIEGLILSANKFKGSIPTSLLNLTHLQMLYLADNKLTGIMPSFGSLTNLEDLDVAYNMLEAGDWGFISSLSNCTRLTKLMLDGNNLQGNLPSSVGNLSSDLQRLWLTNNKISGPIPQEIGNLKSLTELYMDYNQLSEKIPLTIGNLRKLGKLSFARNRLSGQIPDDIGKLVQLNNLNLDWNNLSGSIPVSIGYCTQLEILNLAHNSLDGTIPETIFKISSLSIVLDLSYNYLSGSISDEVGNLVSLNKLIISYNRLSGDIPSTLSQCVVLEYLEMQSNFFVGSIPQTFVNMVGIKVMDISHNNLSGEIPQFLTLLHSLQVLNLSFNNFDGAVPTSGIFANASVVSIEGNDYLCTKTPMRGVPLCSKSVDKKRNHRSLVLVLTTVIPIVAITFTLLCLAKYIWTKRMQAEPHVQQLNEHRNITYEDVLKATNRFSSTNLLGSGSFGTVYKGNLHLPFKEKDNLHLQEEHIAIKIFNLDIHGSNKSFVAECETLQNVRHRNLVKIITLCSSVDSTGADFKAIVFPYFPNGNLDMWLHPKSHEHISQTKVLTLRQRINIALDVALALDYLHNQCELPLVHCDLKPSNILLDSDMVAHVSDFGLARFVYTRSNAHQYTSTSLACLKGSIGYIPPEYGMSKDISTKGDVYSFGILLLEMVTGSSPIDEKFNGGTTLHEFVDAALSNSIHEVVDPTMLQDDVSVADVMERCVIPLVKIGLSCSMALPRERPEMGQVSNMILRIKHAASNMSVK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.397143 4.674325 2.058036

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0588800 SBH 0.208262 0.391048 1.527611
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g38780 RBH 0.210445 0.323044 0.260590
Nipponbare | IRGSP 1.0 | RAP-db Os06g0588800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0020780 SBH 0.134115 1.062366 0.983788
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0020770 SBH 0.115735 0.948394 0.371496
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0020770 RBH 0.061624 1.131939 2.054540
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0020590 SBH 0.038789 0.035139 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0020920 RBH 1.824794 5.857548 2.589116
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0367200 SBH 0.9524215 2.2402625 1.868109
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0020360 RBH 0.049028 0.118818 0.430636
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0344000 SBH 1.5736375 1.5182465 6.9441035
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0020870 SBH 0.017691 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0020850 RBH 0.202952 1.683499 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0020470 RBH 0.656196 6.885436 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0021120 SBH 0.042714 0.133546 0.067458
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0020740 SBH 0.0 0.843503 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G020590 SBH 0.194280 0.0 0.547646
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0020850 RBH 0.137123 3.362489 0.459822
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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