Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_05g0009450 | OGI:05027070 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr05:10255022-10260858 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatagataaaaggttatctattaacTttttttttgagtagtgaatacaccacagttattcaccatttacaaattattaggagcaaacTtttgttaccaggaaagattcaggataagtaattCcattgtttgcaataactcacatcgacacaaaattacaaaattgtgtaaaaaaaaggagttacaatatcgtcatttcaaaccaatatagatggcccatagattttctacattaaattcacctcacctggagagaaacttcagtgatctctttttgcctactcaactcagggttgctagaccatgcgtagctgctagtggtgttgctgctgtacccaccacccctaagctgccactcagtgatgtagcttggcttggTgaCcaccttagCcacatcgacatctccagtcaacattgtcacgacctttgacatTggcggtcgctggtgcggagagCcctgagtgcagacaagtgcaaCatatatgactctaaaagcttcatccttgtcaaattccttgagacttgggtcaacaattccaagtgcttgatccatttcatacaggccccatgccttttgataaacatagtttgagtaagcaaaaggcaatttAcaatgaattgaagttttctagtatgggaagaacatagaccagcatacccattcaaggagacagatcttgctttcctcgagggagttgtcggtgtttggtctCccagcgacagTctccaacatgaccactccgaatgcaaaaatatcagccttttctgacaaatggcctctcattgcatactcaggagctagatagccccttaaaaatgataagacaagttaatagtAgcattcatattgatgttataatcataagaagataagtggtaaaacattcttacaaTgtgcctgcaattctagtgctcacatgagtttgattctcatcgtagagtttggcaagtccaaagtccgagatctttgggatgagattagtgtcAagtagaacattactagcTttgatgtccctatgcacaatacgtacacttgactcctcatgaagataagttagCcctcttgctattcctaaaatgatctcgaagcgcaTtacccagtctaggTttaagttactgtcacctttacaagcagaaatagctcagttatcatcaggaatgccaattatAacAaagatgcagAaaagaaaaatCcttaattattagtcacgaagcaatgagttttatttgtgtagaaagaaaataaaaTtctataagtgccgagggggcaattttacagaagtgaactcaccaaagattgctcgatctaagcttccaTtttcaaggtactcataaaccaacaagggtgttttactatcaatgcagcatccatgcaatatcacaagatttcgatgttgcacagcggaaattgtcgcaacctctgtcacaaactggcttgttccctgatgagatgattgtgaaagttgcttcacagctataactcTttcatcaggtagcttaccctgCcaaggtttttacatgtgtattttgagcatagacAaatgttgctaaaacacagcacttcAatgccaaatcagataaaTttataaccagctgcagttgtacataaTtaattatggaaataaagaaccttatacactggcccgaatccaccttcgcctagaatattttgagaactgaaattgtctgtggctagctttagctcagcataactaaaaacgtcaggtcgtccaaccaggttgtatagttctgcatgttaTttttagcacagatgagaagagtaaaccagataattttgatgtttgaattatatatgtcctgATatataataccttctttctgttgtgccaatgctctccgcttctttactagtgtaaacactccAaataatgctgctaatactaaaactattgcaccaatcaatattccggaaattgcacctgctttacttttcctttttggtatgccgtttcgaacggtaggagtaaaatctgcaaaggaaaaatattatttatcggcagcgaataTaacacttcctgctgTtgttttagtgtggtgcttacttggagtgacgctcaatgctgagatcattggcccatagtaattatctttagtaggtatgtcaacagtgcccttgccagcccAgaatagatggatctcaaggaagTttttagacacagttaccatgaaactcctattaactacgctaaaagattttccacctgctgttttccttatatcgaaAtccTtttgttttagagcaccctatgtaaatatcagtaatacttttagataaaTATtggtaagattcagtagaaaaacattatataaaatgcacaaaatttctacctggatatatatgtcaaaaactcttctccctaagcttagccaagtctgtgagtctggaaaagctaattctgcgaattggagcaaaacagtgtaatttccattctcaagtccaagtccatagtacctcagagatgatgatgacatccttgcagtttcaaacaactctgaatcaactacattttgaaaaggttgggagctaTATataaTaTtctttgcatctatggcgttCcctacactactgacaccccatcttgTttgaccggtaacataatatgttgcagctccaagatttgtaggatctgcttcataaatagtgtcatctgagcctcttatagatgcattactgccacagtcaactgcgaaggaataatctgcaattaagattAAaaaaattgtagcaatcattcaaattcgtaagttcatgttattgtttagttttatgAagaatgagaaatatacaTtctggagatccacggaaacaaggggtgtcttgttggaggcagtttattccccaaggtagcgtactgtgcacaattTgaattgaaaatttaaagttaccagcaagattttcatatagttcactcgccaaattagaactaaatgtcacaagtacctttcactggtggtatcgagtaagaagttgtttgccaccaaaTtcctttcAaaaaacagaatattagtatttataTttttttctcagcgacacaaatatcacacttttacacttacaactgtaaattgttttgtctagcccaagaaggaatgctcccagtgagttggttgtacgaaaaatctctgtcaacattccagaattatgttatacaaaattagtgcgtaCtattaTgaatgtagtttgtgctatactgccatgtcaattgtatttgacaTacatcacttttaacgaagagcttataccatccggcaactttcctgtAaggctatTGgtcccaagaaacctgaattgggcacagttcaagattAtaaaatatactcatctgcttaatacaggctcgtatgaacaaattgatgtaaagaaagAatttcttacaaagaattgagatttcccaaattcaagaTggattgaggaacttctcctgtgatattgttaaaactcaagtccctgtgccacatgactatcatattacttgaacatatggtacacaacatgaggaaatgagtaataacgtcatcaGTtggcaccatggcctgtaattgaaAacttAcagcAaTTttaactgtttaaacatggaaaaatctactgctccgagatcactagatatcTTgcagttcctcaatattctgtaacgaggaaatacaaccTtggtaacttgcaactagacaatactgtaagctttatagctaaaagcatcacatacagtgtgctcagggatgccatattactgatAaatgccaacggagagaccccaTttataatatctccaatccatctgctcatttgagtttttcataaattagttatcagccttgacattgtcaaCcttcaagagTtcatgccacAaaaagagtatacttacAatcttgttaatttggtcagattagacagactttctgggactggtccttcaaaggagtttccgtggaaagcactacaagctcattAttttagAaaaaaaggtagggacattcaaccTttataaagTaAGaaaaaaaatctctgtgtgagcatTCttaatAagaTCTctaggtatgaacaTgccatgtggaccgcttactgtgatgcagatatctgcaTttatattgagtgaggactgaaatgTGaaaaaatgcttttgtttaagtctgaatggagatAatgtgatatacAgacagtaaTttatcttgcacagattcatctatctctgaacagtaagaacgaatgatatcttaacaagcttacatgtcttccaaattagtcattgtgcccaaataagcaggtattttccctttgaatacaTtatctgatGcactcctgcaagcagaccaaaatatcatttagcatgaaaacatgacgaataTaataattgaggctatgtttttgaCtatacaagaTcttcaggttctgaagttttgagaacgatgaagggaacggaccactgaatccagaactatcaaagtacctgttattgaaagtttgaaatattatcatgtttgacaaTagatatgaccaTtccaaatttagttcttttacaagtagaaataagAagttagaaatcaatggggtatcttacaattgctgaagtttggtcaagttacccagttcttctggaagacttcctgtaaaattgtctgagctaatgcccctaaatgaaaaatgaaatatttcaggactgacAaaaaatttttgtcatcaactaatagcaaaaggggcatagttttcctgatgtgccattggacccacaatattcatcattacaatatgttcaagtatttgctgttcaatcttacttgatcatatgaagcAccacatgaccaggagttacactgacatgcctaTtacatcctatttagtagtagttttgatcTtttttatcactccctccgtcccattataagtgcaaccataaGTttctgtttcAaacgtttgaccgttcgtcttatttgaaaaaTttatgattgtttttgaaaaaataagtcatgcAtaaactactattcatattttatcaTCtaataacaattagaatactattcataaaaatatttcaaataaaacggacggtcaaaTGgtgagcactAaaacccacaactgcacttgcacttaTtatgggacgggggaagtagaacttatgcgattgctatttcatgtattattatattagtTcgtgcagtccaaatatatactccactcatttcatattatctgtcAttctacTtttgttgtaagtcaaacattataTttctaaccatccatttttacataTttatatagtttaacatttagattcaacatgagaaatAatttcataatttatagttcgtactccctccgtaaaaaaaaatacaacttctagctaacaatctacacataagctatgctcagattcgtagtcataagttcaactctctctctctctatatatatgtgcgcgcgcgcgtgaaaactgctaggaattgacagTtaaagctgaaaGgatgagtggtttgtagcagagggagcattggaagattaatccacatgtgacaaaagatttcttacaatgaaagaagattggtgaggtttcctagttcctttggaagtagtccagatagtggattgaaagataatgaccttgagatgattagcaataattAaaaaaaaacaacgaccaatagatggaacatgatctagaacaaacatgtaactcatacaagtattgcattgaagTAaaTtttccgatgaacgacggaatgggaccagtcaagtaattacggaataagttcctgaaaagatcacaaaaataaactagaacaaTtagccaacacaaaaataatgatgaatacctgacaagcat
More
|
||||||||||
| CDS seq | atgcttgtcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaAttTActtcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagAtcttgagtgCatcagataAtgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacattgctttccacggaaactcctttgaaggaccagtcccagaaagtctgtctaatctgaccaaattaacaagatTatggattggagatattataaAtggggtctctccgttggcattTatcagtaatatggcatccctgagcacactaatattgaggaactgcAAgatatctagtgatctcggagcagtagatttttccatgtttaaacagttaaAAtTgctggacttgagttttaacaatatcacaggagaagttcctcaatccAtcttgaatttgggaaatctcaattctttgtttcttgggacCAatagcctTacaggaaagttgccggatggtataagctcttcgttaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaAtttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaAtattattccttcgcagttgactgtggcagtaatgcatctataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaAcaagatggggtgtcagtagtgtaggGaacgccatagatgcaaagaAtAttatATAtagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaAggaTttcgatataaggaaaacagcaggtggaaaatcttttagcgtagttaataggagtttcatggtaactgtgtctaaaaActtccttgagatccatctattcTgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattattTggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaAgagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaAtggaagcttagatcgagcaatctttggtgacagtaacttaaAcctagactgggtaAtgcgcttcgagatcattttaggaatagcaagaggGctaacttatcttcatgaggagtcaagtgtacgtattgtgcatagggacatcaaAgctagtaatgttctactTgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacAttgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagActgtcgctggGagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatgggcatggggcctgtatgaaatggatcaagcacttggaattgttgacccaagtctcaaggaatttgacaaggatgaagcttttagagtcatatatGttgcacttgtctgcactcaggGctctccgcaccagcgaccgccAatgtcaaaggtcgtgacaatgttgactggagatgtcgatgtgGctaaggtgGtcAccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
More
|
||||||||||
| Protein seq | MLVRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKILSASDNVFKGKIPAYLGTMTNLEDIAFHGNSFEGPVPESLSNLTKLTRLWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVDFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGTNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFSVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWAWGLYEMDQALGIVDPSLKEFDKDEAFRVIYVALVCTQGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0009450 | OsNaBo_05g0009450.03 | Chr05 | 10255260 | 10260858 | - | NAM | ||
| CDS seq | atgcttgtcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaAttTActtcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagAtcttgagtgCatcagataAtgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacatatggattggagatattataaAtggggtctctccgttggcattTatcagtaatatggcatccctgagcacactaatattgaggaactgcAAgatatctagtgatctcggagcagtagatttttccatgtttaaacagttaaAAtTgctggacttgagttttaacaatatcacaggagaagttcctcaatccAtcttgaatttgggaaatctcaattctttgtttcttgggacCAatagcctTacaggaaagttgccggatggtataagctcttcgttaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaAtttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaAtattattccttcgcagttgactgtggcagtaatgcatctataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaAcaagatggggtgtcagtagtgtaggGaacgccatagatgcaaagaAtAttatATAtagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaAggaTttcgatataaggaaaacagcaggtggaaaatcttttagcgtagttaataggagtttcatggtaactgtgtctaaaaActtccttgagatccatctattcTgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattattTggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaAgagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaAtggaagcttagatcgagcaatctttggtgacagtaacttaaAcctagactgggtaAtgcgcttcgagatcattttaggaatagcaagaggGctaacttatcttcatgaggagtcaagtgtacgtattgtgcatagggacatcaaAgctagtaatgttctactTgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacAttgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagActgtcgctggGagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatgggcatggggcctgtatgaaatggatcaagcacttggaattgttgacccaagtctcaaggaatttgacaaggatgaagcttttagagtcatatatGttgcacttgtctgcactcaggGctctccgcaccagcgaccgccAatgtcaaaggtcgtgacaatgttgactggagatgtcgatgtgGctaaggtgGtcAccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
More
|
|||||||
| Protein seq | MLVRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKILSASDNVFKGKIPAYLGTMTNLEDIWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVDFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGTNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFSVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWAWGLYEMDQALGIVDPSLKEFDKDEAFRVIYVALVCTQGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0009450 | OsNaBo_05g0009450.01 | Chr05 | 10255022 | 10260858 | - | NAM | ||
| CDS seq | atgcttgtcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaAttTActtcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagAtcttgagtgCatcagataAtgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacattgctttccacggaaactcctttgaaggaccagtcccagaaagtctgtctaatctgaccaaattaacaagatTatggattggagatattataaAtggggtctctccgttggcattTatcagtaatatggcatccctgagcacactaatattgaggaactgcAAgatatctagtgatctcggagcagtagatttttccatgtttaaacagttaaAAtTgctggacttgagttttaacaatatcacaggagaagttcctcaatccAtcttgaatttgggaaatctcaattctttgtttcttgggacCAatagcctTacaggaaagttgccggatggtataagctcttcgttaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaAtttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaAtattattccttcgcagttgactgtggcagtaatgcatctataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaAcaagatggggtgtcagtagtgtaggGaacgccatagatgcaaagaAtAttatATAtagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaAggaTttcgatataaggaaaacagcaggtggaaaatcttttagcgtagttaataggagtttcatggtaactgtgtctaaaaActtccttgagatccatctattcTgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattattTggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaAgagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaAtggaagcttagatcgagcaatctttggtgacagtaacttaaAcctagactgggtaAtgcgcttcgagatcattttaggaatagcaagaggGctaacttatcttcatgaggagtcaagtgtacgtattgtgcatagggacatcaaAgctagtaatgttctactTgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacAttgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagActgtcgctggGagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatgggGctctccgcaccagcgaccgccAatgtcaaaggtcgtgacaatgttgactggagatgtcgatgtgGctaaggtgGtcAccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
More
|
|||||||
| Protein seq | MLVRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKILSASDNVFKGKIPAYLGTMTNLEDIAFHGNSFEGPVPESLSNLTKLTRLWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVDFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGTNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFSVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0009450 | OsNaBo_05g0009450.02 | Chr05 | 10255026 | 10260858 | - | NAM | ||
| CDS seq | atgcttgtcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaAttTActtcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagAtcttgagtgCatcagataAtgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacattgctttccacggaaactcctttgaaggaccagtcccagaaagtctgtctaatctgaccaaattaacaagatTatggattggagatattataaAtggggtctctccgttggcattTatcagtaatatggcatccctgagcacactaatattgaggaactgcAAgatatctagtgatctcggagcagtagatttttccatgtttaaacagttaaAAtTgctggacttgagttttaacaatatcacaggagaagttcctcaatccAtcttgaatttgggaaatctcaattctttgtttcttgggacCAatagcctTacaggaaagttgccggatggtataagctcttcgttaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaAtttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaAtattattccttcgcagttgactgtggcagtaatgcatctataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaAcaagatggggtgtcagtagtgtaggGaacgccatagatgcaaagaAtAttatATAtagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaAggaTttcgatataaggaaaacagcaggtggaaaatcttttagcgtagttaataggagtttcatggtaactgtgtctaaaaActtccttgagatccatctattcTgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattattTggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaAgagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaAtggaagcttagatcgagcaatctttggtgacagtaacttaaAcctagactgggtaAtgcgcttcgagatcattttaggaatagcaagaggGctaacttatcttcatgaggagtcaagtgtacgtattgtgcatagggacatcaaAgctagtaatgttctactTgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacAttgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagActgtcgctggGagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatgggcatggggcctgtatgaaatggatcaagcacttggaattgttgacccaagtctcaaggaatttgacaaggatgaagcttttagagtcatatatGttgcacttgtctgcactcaggGctctccgcaccagcgaccgccAatgtcaaaggtcgtgacaatgttgactggagatgtcgatgtgGctaaggtgGtcAccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
More
|
|||||||
| Protein seq | MLVRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKILSASDNVFKGKIPAYLGTMTNLEDIAFHGNSFEGPVPESLSNLTKLTRLWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVDFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGTNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFSVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWAWGLYEMDQALGIVDPSLKEFDKDEAFRVIYVALVCTQGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0009450 | OsNaBo_05g0009450.04 | Chr05 | 10255024 | 10255570 | - | IsoSeq | ||
| CDS seq | atcaagcacttggaattgttgacccaagtctcaaggaatttgacaaggatgaagcttttagagtcatatatGttgcacttgtctgcactcaggGctctccgcaccagcgaccgccAatgtcaaagg |
|||||||
| Protein seq | IKHLELLTQVSRNLTRMKLLESYMLHLSALRALRTSDRQCQR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr05 | 10255478 | 10255680 | - | OsNaBo_05g0009450.02,OsNaBo_05g0009450.03 | OsNaBo_05g0009450.03,OsNaBo_05g0009450.01,OsNaBo_05g0009450.02 | All |
| SE | Chr05 | 10258818 | 10259268 | - | OsNaBo_05g0009450.01,OsNaBo_05g0009450.02 | OsNaBo_05g0009450.03,OsNaBo_05g0009450.02,OsNaBo_05g0009450.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 100.423065 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0263100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g17604 | RBH | 0.032379 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0263100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009360 | RBH | 0.033656 | 6.550403 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009400 | RBH | 0.000000 | 0.384760 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009300 | RBH | 0.000000 | 2.729673 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009390 | RBH | 0.0 | 0.093094 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009460 | RBH | 0.0 | 11.104769 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0142600 | SBH | 1.7083545 | 22.403785 | 0.557805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009330 | RBH | 0.0 | 0.609378 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0143500 | SBH | 2.045069 | 23.487054 | 4.33683 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009300 | RBH | 0.0 | 1.053380 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009250 | RBH | 0.0 | 19.745775 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0009350 | RBH | 0.0 | 36.334873 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0009390 | RBH | 0.0 | 0.922435 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0009390 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G009150 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0009460 | RBH | 0.0 | 1.424525 | 0.0 |
