Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_05g0009400 | OGI:05027070 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr05:10021195-10027027 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttacagataaaaggttatctattaacttttttttttgagtagtgaatacaccacagttattcaccatttacaaattattaggagcaaacttttgttaccaggaaagattcaggataagtaattccattgtttgcaataactcacatcgacacaaaattacaaaattatgtaaaaaaaaggagttacaatatcgtcatttcaaaccaatatagatggcccatagattttctacattaaattcacctcacctggagagaaacttcagtgatctctttttgcctactcaactcagggttgctagaccatgcgtagctgctagtggtgttgctgctgtacccaccacccctaagctgccactcagtgatgtagcttggcttggtgaccaccttagccacatcgacatctccagtcaacattgtcacgaccttcgacattggcggtcgctggtgcggagagccctgagtgcagacaagtgcaacatatatgactctaaaagcttcatccttgtcaaattccttgagacttgggtcaacaattccaagtgcttgatccatttcatacaggccccatgccttttgataaacatagtttgagtaagcaaaaggcaatttacaatgaattgaagttttctagtatgggaagaacatagaccaGcatacccattcaaggagacagatcttgctttcctcgagggagttgtcggtgtttggtctcccagcgacagtctccaacatgaccactccgaatgcaaaaatatcagccttttctgacaaatggcctctcattgcatactcaggagctagatagccccttaaaaatgataagacaagttaatagtagcattcatattgatgttataatcataagaagataagtggtaaaacattcttacaatgtgcctgcaattctagtgctcacatgagtttgattctcatcgtagagtttggcaagtccaaagtccgagatctttgggatgagattagtgtcaagtagaacattactagctttgatgtccctatgcacaatgcgtacacttgactcctcatgaagataagttagccctcttgctattcctaaaatgatctcgaagcgcattacccagtctaggtttaagttactgtcacctttacaagcagaaatagctcagttatcatcaggaatgccaattataacaaagatgcagaaaagaaaaatccttaattattagtcacgaagcaatgagttttAtttgtgtagaaagaaaatacaattctataagtgccgagggcggcaattttacagaagtgaactcaccaaagattgctcgatctaagcttccattttcaaggtactcataaaccaacaagggtgttttactatcaatgcagcatccatgcaatatcacaagatttcgatgttgcacagcggaaattgtcgcaacctctgtcacaaactggcttgttccctgatgagatgattgtgaaagttgcttcacagctataactctttcatcaggtagcttaccctgccaaggtttttacatgtgtattttgagcatagacaaatgttgctaaaacacagcacttcaatgccaaatcagataaatttataaccagctgcagttgtacataattaattatggaaataaagaaccttatacactggcccgaatccaccttcgcctagaatattttgagaactgaaattgtctgtggctagctttagctcagcataactaaaaacgtcaggtcgtccaaccaggttgtatagttctgcatgttatttttagcacagatgagaagagtaaaccagataattttgatgtttgaattatatatgtcctgatatataataccttctttctgttgtgccaatgctctccgcttctttactagtgtaaacactccaaataatgctgctaatactaaaactattgcaccaatcaatattccggaaattgcacctgctttacttttcctttttggtatgccgtttcgaacggtaggagtaaaatctgcaaaggaaaaatattatttatcggcagcgaatataacacttcctgctgttgttttagtgtggtgcttacttggagtgacgctcaatgctgagatcattggcccatagtaattatctttagtaggtatgtcaacagtgcccttgccagcccagaatagatggatctcaaggaagtttttagacacagttaccatgaaactcctattaactacggtaaaagattttccacctgctgttttccttatatcgaaatccttttgttttagagcaccctatgtaaatatcagtaatacttttagataaatattggtaagattcagtagaaaaacattatataaaatgcacaaaatttctacctggatatatatgtcaaaaactcttctccctaagcttagccaagtctgtgagtctggaaaagctaattctgcgaattggagcaaaacagtgtaatttccattctcaagtccaagtccatagtacctcagagatgatgatgacatccttgcagtttcaaacaactctgaatcaactacattttgaaaaggttgggagctatatataatattctttgcatctatggcgttccctacactactgacaccccatcttgtttgaccggtaacataatatgttgcagctccaagatttgtaggatctgcttcataaatagtgtcatctgagcctcttatggatgcattactgccacagtcaactgcgaaggaataatctgcaattaagattaaaaaaattgtagccatcattcaaattcgtaagttcatgttactgtttagttttatgaagaatgagaaatatacattctggagatccacggaaacaaggggtgtcttgttggaggcagtttattccccaaggtagcgtactgtgcacaatttgaattgaaaatttaaagttaccagcaagattttcatatagttcactcgccaaattagaactaaatgtcacaagtacctttcactggtggtatcgagtaagaagttgtttgccaccaaattcctttcaaaaaacagaatattagtatttatattttttctcagcgacacaaatatcacacttttacacttacaactgtaaattgttttgtctagcccaagaaggaatgctcccagtgagttggttgtacgaaaaatctctgtcaacattccaGaattatgttatacaaaattagtgcgtactattatgaatgtagtttgtgctatactgccatgtcaattgtatttgacatacatcacttttaatgaagagcttataccatccggcaactttcctgtaaggctattgttcccaagaaacctgaattgggcacagttcaagattataaaatatactcatctgcttaatacaggctcgtatgaacaaattgatgtaaagaaagaatttcttacaaagaattgagatttcccaaattcaagatggattgaggaacttctcctgtgatattgttaaaactcaagtccctgtgccacatgactatcatattacttgaacatatggtacacaacatgaggaaatgagtaataacgtcatcagttggcaccatggcctgtaattgaaaacttacagcaattttaactgtttaaacatggaaaattctactgctccgagatcactagatatcttgcagttcctcaatattctgtaacgaggaaatacaaccttggtaacttgcaactagacaatactgtaagctttatagctaaaagcatcacatacagtgtgctcagggatgccatattactgataaatgccaacggagagaccccatttataatatctccaatccatctgctcatttgagtttttcataaattagttatcagccttgacattgtcaaccttcaagagttcatgccacaaaaagagtatacttacaatcttgttaatttggtcagattagacagactttctgggactggtccttcaaaggagtttccgtggaaagcactacaagctcattattttagaaaaaaagttagggacattcaacctttataaagtaagaaaaaaaatctctgtgtgagcattcttaataagatctctaggtatgaacatgccatgtggaccgcttactgtgatgcagatatctgcatttatattgagtgaggactgaaatgtgaaaaaatgcttttgtttaagtctgaatggagataatgtgatatacagacagtaatttatcttgcacagattcatctatctctgaacagtaagaacgaatgatatcttaacaagcttacatgtcttccaaattagtcattgtgcccaaataagcaggtattttccctttgaatacattatctgatgcactcctgcaagcagaccaaaatatcatttagcatgaaaacatgacgaatataataattgaggctatgtttttgactatacaagaacttcaggttctgaagttttgagaacgatgaagggaacggaccactgaatccagaactatcaaagtacctgttattgaaagtttgaaatattatcatgtttgacaatagatatgaccattccaaatttagttcttttacaagtagaaataagaagttagaaatcaatggggtatcttacaattgctgaagtttggtcaagttacccagttcttctggaagacttcctgtaaaattgtctgagctaatgcccctaaatgAaaaatgaaatatttcaggactgacaaaaaatttttgtcatcaactaatagcaaaaggggcatagttttcctgatgtgccattggacccacaatattcatcattacaatatgttcaagtatttgctgttcaatcttacttgatcatatgaagcaccacatgagcaggagttacactgacatgcctattacatcctatttagtagtagttttgatcttttttatcactccctccgtcccattataagtgcaaccataagtgtttctgtatcaaacgtttgaccgttcgtcttatttgaaaaaattatgattgtttttaaaaaaataagtcatgcataaactactattcatattttatcatctaataacaattagaatactatttataaaaatatttcaaataaaacggacggtcaaatgttgagcactaaaacccacaactgcacttattatgggacgggggaagtagaacttatgcgattgctatttcatgtattattatattagttcgtgcagtccaaatatatactccactcatttcatattatctgtcattctacttttgttgtaagtcaaacattatatttctaaccatccatttttacatatttatatagtttaacatttagattcaacatgagaaataatttcataatttatagttcgtactccctccgtAAaaaaaaaatacaacttctagctaacaatttacacataagctatgctcagattcgtagtcataagttcaactctctctctatatatatgtgcgcgcacgcgcgtgaaaactgctaggaattgacagttaaagctgaaaggatgagtggtttgtagcagagggagcagtggaagattaatccacatgtgagaaaagatttcttacaatgaaagaagattggtgaggtttcctagttcctttggaagtagtccagatagtggattgaaagataatgaccttgagatgattagcaataattaaaaaaaaacaacgaccaatagatggaacatgatctagaacaaacatgtaactcatacaagtattgcattgaagtaaattttccgatgaacgacggaatgggaccagtcaagtaattacggaataagttcctgaaaagatcacAaaaataaactagaacaattagccaacacaaaaataatgatgaatacctgacaagcat
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| CDS seq | atgcttgtcaggtattcatcattatttttgtgttggctaattgttctagtttattttTgtgatcttttcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaatttacttcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagttcttgagtgcatcagataatgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacatatggattggagatattataaatggggtctctccgttggcatttatcagtaatatggcatccctgagcacactaatattgaggaactgcaagatatctagtgatctcggagcagtagaattttccatgtttaaacagttaaaattgctggacttgagttttaacaatatcacaggagaagttcctcaatccatcttgaatttgggaaatctcaattctttgtttcttgggaacaatagccttacaggaaagttgccggatggtataagctcttcattaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaatttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaatattattccttcgcagttgactgtggcagtaatgcatccataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaacaagatggggtgtcagtagtgtagggaacgccatagatgcaaagaatattatatatagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaaggatttcgatataaggaaaacagcaggtggaaaatcttttaccgtagttaataggagtttcatggtaactgtgtctaaaaacttccttgagatccatctattctgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattatttggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaagagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaatggaagcttagatcgagcaatctttggtgacagtaacttaaacctagactgggtaatgcgcttcgagatcattttaggaatagcaagagggctaacttatcttcatgaggagtcaagtgtacgcattgtgcatagggacatcaaagctagtaatgttctacttgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacattgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagactgtcgctgggagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatggggctctccgcaccagcgaccgccaatgtcgaaggtcgtgacaatgttgactggagatgtcgatgtggctaaggtggtcaccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
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| Protein seq | MLVRYSSLFLCWLIVLVYFCDLFRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKFLSASDNVFKGKIPAYLGTMTNLEDIWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVEFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGNNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFTVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0009400 | OsKeNa_05g0009400.01 | Chr05 | 10021195 | 10027027 | - | NAM | ||
| CDS seq | atgcttgtcaggtattcatcattatttttgtgttggctaattgttctagtttattttTgtgatcttttcaggaacttattccgtaattacttgactggtcccattccgtcgttcatcggaaaatttacttcaatgcaatacttgtcattatctttcaatccactatctggactacttccaaaggaactaggaaacctcaccaatcttctttcattgggcattagctcagacaattttacaggaagtcttccagaagaactgggtaacttgaccaaacttcagcaattgtactttgatagttctggattcagtggtccgttcccttcatcgttctcaaaacttcagaacctgaagttcttgagtgcatcagataatgtattcaaagggaaaatacctgcttatttgggcacaatgactaatttggaagacatatggattggagatattataaatggggtctctccgttggcatttatcagtaatatggcatccctgagcacactaatattgaggaactgcaagatatctagtgatctcggagcagtagaattttccatgtttaaacagttaaaattgctggacttgagttttaacaatatcacaggagaagttcctcaatccatcttgaatttgggaaatctcaattctttgtttcttgggaacaatagccttacaggaaagttgccggatggtataagctcttcattaaaagtgatagatttttcgtacaaccaactcactgggagcattccttcttgggctagacaaaacaatttacagttgaatttggtggcaaacaacttcttactcgataccaccagtgaaagtacgctaccttggggaataaactgcctccaacaagacaccccttgtttccgtggatctccagaatattattccttcgcagttgactgtggcagtaatgcatccataagaggctcagatgacactatttatgaagcagatcctacaaatcttggagctgcaacatattatgttaccggtcaaacaagatggggtgtcagtagtgtagggaacgccatagatgcaaagaatattatatatagctcccaaccttttcaaaatgtagttgattcagagttgtttgaaactgcaaggatgtcatcatcatctctgaggtactatggacttggacttgagaatggaaattacactgttttgctccaattcgcagaattagcttttccagactcacagacttggctaagcttagggagaagagtttttgacatatatatccagggtgctctaaaacaaaaggatttcgatataaggaaaacagcaggtggaaaatcttttaccgtagttaataggagtttcatggtaactgtgtctaaaaacttccttgagatccatctattctgggctggcaagggcactgttgacatacctactaaagataattactatgggccaatgatctcagcattgagcgtcactccaaattttactcctaccgttcgaaacggcataccaaaaaggaaaagtaaagcaggtgcaatttccggaatattgattggtgcaatagttttagtattagcagcattatttggagtgtttacactagtaaagaagcggagagcattggcacaacagaaagaagaactatacaacctggttggacgacctgacgtttttagttatgctgagctaaagctagccacagacaatttcagttctcaaaatattctaggcgaaggtggattcgggccagtgtataagggtaagctacctgatgaaagagttatagctgtgaagcaactttcacaatcatctcatcagggaacaagccagtttgtgacagaggttgcgacaatttccgctgtgcaacatcgaaatcttgtgatattgcatggatgctgcattgatagtaaaacacccttgttggtttatgagtaccttgaaaatggaagcttagatcgagcaatctttggtgacagtaacttaaacctagactgggtaatgcgcttcgagatcattttaggaatagcaagagggctaacttatcttcatgaggagtcaagtgtacgcattgtgcatagggacatcaaagctagtaatgttctacttgacactaatctcatcccaaagatctcggactttggacttgccaaactctacgatgagaatcaaactcatgtgagcactagaattgcaggcacattgggctatctagctcctgagtatgcaatgagaggccatttgtcagaaaaggctgatatttttgcattcggagtggtcatgttggagactgtcgctgggagaccaaacaccgacaactccctcgaggaaagcaagatctgtctccttgaatggggctctccgcaccagcgaccgccaatgtcgaaggtcgtgacaatgttgactggagatgtcgatgtggctaaggtggtcaccaagccaagctacatcactgagtggcagcttaggggtggtgggtacagcagcaacaccactagcagctacgcatggtctagcaaccctgagttgagtaggcaaaaagagatcactgaagtttctctccaggtgaggtga
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| Protein seq | MLVRYSSLFLCWLIVLVYFCDLFRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLYFDSSGFSGPFPSSFSKLQNLKFLSASDNVFKGKIPAYLGTMTNLEDIWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVEFSMFKQLKLLDLSFNNITGEVPQSILNLGNLNSLFLGNNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFTVVNRSFMVTVSKNFLEIHLFWAGKGTVDIPTKDNYYGPMISALSVTPNFTPTVRNGIPKRKSKAGAISGILIGAIVLVLAALFGVFTLVKKRRALAQQKEELYNLVGRPDVFSYAELKLATDNFSSQNILGEGGFGPVYKGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHVSTRIAGTLGYLAPEYAMRGHLSEKADIFAFGVVMLETVAGRPNTDNSLEESKICLLEWGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.384760 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0263100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g16824 | SBH | 1.396188 | 1.701065 | 1.434122 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0263100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009360 | RBH | 0.033656 | 6.550403 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009420 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009300 | RBH | 0.000000 | 2.729673 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009390 | RBH | 0.0 | 0.093094 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009460 | RBH | 0.0 | 11.104769 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0140200 | SBH | 0.4547805 | 2.347724 | 0.0045095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009330 | RBH | 0.0 | 0.609378 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0145600 | SBH | 1.727006 | 46.4663545 | 0.021656 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009300 | RBH | 0.0 | 1.053380 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009250 | RBH | 0.0 | 19.745775 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0009350 | RBH | 0.0 | 36.334873 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0009390 | RBH | 0.0 | 0.922435 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0009390 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G009150 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0009450 | RBH | 0.0 | 100.423065 | 0.0 |
