Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_07G023910 | OGI:01039680 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:25778073-25781422 | ||||||||
| Gene Symbol | IBP | ||||||||||
| DNA seq | GAAGCAGGGATAATAGCATGACCCTGAAACTGAAGTTCAAACATAAACTGCCACACACATAATGTTGTCCGTCTGAAATTAGGACCATACTATATCACACATACTGCCGCACACATAGACACTGAACTTCGACACAGACTCTAGACTCTGAAGTCTGAACATTTAGAACAGAACTGAACACACAGACACTGGACGCTGAACATTCAGAAACTAAACTACGCTACGAGCTGAACTTCTAGATATTGCAACGTCGAGCGAGAATCTCGTTCTGACGCCATTCATAATATTTCTGCTGATTGTAGTTCATTGTGCTCAAATCCAAACCGAGAATTCTCTCCTCTTCCACCTTCTCAGCCTTCTCAGCTTCTTTCTTCTGGAACTCAAACTTTTCTATCTCCAATTTGTTCCATTCTTCCTGCAGAGCAAAGGCTCTCTTGCACCTCTCTTCCTGCAAAGCAAAGGCTTTCTTGCACATCTCTTCTTTCTTCAACTCTCTCACAACATCAGCTTCTTTCTTCTTTTCCATCAGATAGTCCACTGCTTCTATGGTTCTACCCTGTCGTAGCTTCTGTTTTGCCGCCTTCTTTCCATCCGGTCTTACAGATGGTTGAGCATCAGAATAATAGATTTCAAGATCAGCAGGTTCAACTGATGCATGACTTGAATTTGCCGTTGTCTTCTGTTTCTTATTGCTTGGTTTTTTGGCACATCCAACTTTCTTCCGATTGTCCATCCACTCAGGCTTGTCCTTCAGGATATTCCAGCAATGCATCAAGTTAAACTTCCTATGCTTCTTGTCTTCCTCCTTAAACAATTCACATGCATTTGCAATCTGCACATTTGAAACCAAAATAAACATGAGAACTAAAAACTGCGACAAATAATCATACCACAGAAATAATGTGTTTACCTTGTCATCAACTCTAGAACCACTCTGGTTCCTACCCTCTATTCTGGACATACATCCACAGAAAATATTCACATCATGTTGTATTGCGGACCAACGATTCAATAAAGAGGATTCAGAACGTGTTGACTCAAACTCTTTGTTGGCATGAAAATATTCATGTATTCCTGCCCAATATGTGCCTTGTGATTGATCTACTCCTTGAATAGGATCCATGCCCACATTCAACCAAGCTGACACAAGAAGGATGTCCTCTTGAGTAGTGAAATTTTTGGTCCTACCCTGAGAACTCTTGGCAGCTGTTGGAGCTCCATTGGAGATTGGATCACTAGTAGGTGTGACAAATTGAGATTCATCAACATCATTTACTAGGAGGTCAATGAAATAACATGATTGCGTACTATCTGTCACAGGAAAATAAATGGAGAATAAACATCATGTAGGATTGTAAGCCGGCAATAGGAAAAGCAACTACACCACTGGTTCCATTCAACATCTCAGGGCATGGGAAGCTCAAGATTTGCATGGGAACTCTGGCTGAATAACATGATATGCAAACCAGACAATTGTAGTAATGTAACTACTATCGAGCTGAATAAAATTATATGCAATGTGGACATTTGCAGCAATGTAAATAACAGAGTATTATCCTTTTAATTTACCTACTCTCTTGTAATTGTAAACTATCTTATTTTGTAGAAATTATTGTGATGTGAATGCAGGATGGAAGATTTAGAGCAAAAAGAGACTCAGGGTAGGTCCTGTTTATTTACTTGCAAAGAAGAAGCAATTTGATCTAGATGAATCTTTCATTCAAATGTACTGTACTAACAAGCAGCTACTCTGGTCAAGTGCGAAGAAAGACAGCAATTTTATTTCCAGAAACCTACAACCAACATGAATGCAATCCCAAAATCCTCAGGTAGAATACAGCACAAGCTAAACTTCCTGTGATCCAGTCATCCAACTAACAACAAAGGGTTTGACAGACGTAGATAGTGAGTCTCACCTGTGCAGACCTCCTCATCAGTGACTTGCTCACCGATGAACAGACCTTGTGCCTTCCAACCATCGACGCCTATTGGAGGAACCACCCGATGGCGCATCGATCCAATACCCGACTGATCCAAGTCCCCTTCCGGCGATGAGCATCCTGATCCAAGTCCCTAGCCGCCGTTGAAGCAGGACGCAGCAGCCTCCACATGGCAAGACGAAGGCCGGGGCCGGAGCGGCGCGACGGCTGAAGGGCGGGGGTGCTAGACGGCGGGACCGACGACGGCGCGGGACGGCGAGGGCGTGGGACGGCGGGACAGGTGCGACGGCGTAGCACGGCGGGAGGGCGTGACGACGGGACCGATTGGGCTGGTGCGCGCGGGCGGGAAACGAGCGCATGCGCGGGAGAGAGGCGATTGCGAGCGAGATGGCCACTGCAAATATGCAGGACGAGGGGCGACGGATGCCGAATGGGATCGCGAGCGGAGCGAGATACCGAGTGTGTTGGACCCCGGTTTTGACTCGTTTTTTTTTTTTTTTTACCGATCCAAACCAGATAGCTAGATTGTTGGAGTTGCTCTAAACGTGCATTACGCAAAACCAATGAAAAAGATGTATATTTCCTTTCTTTTTCAAAATAAAGAGGTAACCACGCTGAAGTTCATACAACCAGCCAAACATAATCTTCTTCATGTACTATATTTCATACAAGCAACTAAACAACACCTATCTAAGTTACTTGAAAAGAGCGCAACATCTGTAAAAAACCTCTATAGGTGCCGGTTGAAAACCGACAATAGGTGCCAGTTTCCCAGTCAAAAAGTAGCCGGCTCCAAGCCGAGCCGATGCGCATCAATAATCCCCATTCAAGAATGCTTTCACAAATCACAAATCAAGCAGATGAACAACAATCAAGCAGTCCCTAATCCAATCCATCATCAATCACAAATATGAACAACAATAATTCCAATTCAAGCAGTCCCTAATCCAATTCATCACCAATCACAGATATGAACACAATAATCTCCATCACAAATTAGCAACAACAAACAACAATATTTCCCATCACAGATGAAGAACATAAGCGAGATGCACAAACTCACTCGTCAATCCGCCAAGGTCGCCGCCGGGGTCCCTCTCCACGCGAGGTCGCTGCCAGCCGCTGGGTCCCTCTCCATGCAAGGTCGCTGCCAAGGTCCCTCATTGCGGGAGGTCGCCGCCGGCCGCCGGGTCCCTCTTCGCGCGGAGGTCGCCGCACCCATCCCTCTCCGTGCTGAGGTCGCCGCCGGTGGGAGGCCGACGGAGAGGGCGACGCTGCTCGCCGGCTGGGAGAGGAGGGCGGAGGGGGAGGGGGAGGGGGAGGGTAGGGCGGCGGATCAGAGGAGGAGGCGAGAGGGGAGGGGGGCGGAGGGCGCGGTGGAGGAGAGGCGATTGGAGAAGTGCGCGAGTG
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| CDS seq | ATGAGGGACCTTGGCAGCGACCTTGCATGGAGAGGGACCCAGCGGCTGGCAGCGACCTCGCGTGGAGAGGGACCCCGGCGGCGACCTTGGCGGATTGACGATGATCCAATCTCCAATGGAGCTCCAACAGCTGCCAAGAGTTCTCAGGGTAGGACCAAAAATTTCACTACTCAAGAGGACATCCTTCTTGTGTCAGCTTGGTTGAATGTGGGCATGGATCCTATTCAAGGAGTAGATCAATCACAAGGCACATATTGGGCAGGAATACATGAATATTTTCATGCCAACAAAGAGTTTGAGTCAACACGTTCTGAATCCTCTTTATTGAATCGTTGGTCCGCAATACAACATGATGTGAATATTTTCTGTGGATGTATGTCCAGAATAGAGGGTAGGAACCAGAGTGGTTCTAGAGTTGATGACAAGATTGCAAATGCATGTGAATTGTTTAAGGAGGAAGACAAGAAGCATAGGAAGTTTAACTTGATGCATTGCTGGAATATCCTGAAGGACAAGCCTGAGTGGATGGACAATCGGAAGAAAGTTGGATGTGCCAAAAAACCAAGCAATAAGAAACAGAAGACAACGGCAAATTCAAGTCATGCATCAGTTGAACCTGCTGATCTTGAAATCTATTATTCTGATGCTCAACCATCTGTAAGACCGGATGGAAAGAAGGCGGCAAAACAGAAGCTACGACAGGGTAGAACCATAGAAGCAGTGGACTATCTGATGGAAAAGAAGAAAGAAGCTGATGTTGTGAGAGAGTTGAAGAAAGAAGAGATGTGCAAGAAAGCCTTTGCTTTGCAGGAAGAGAGGTGCAAGAGAGCCTTTGCTCTGCAGGAAGAATGGAACAAATTGGAGATAGAAAAGTTTGAGTTCCAGAAGAAAGAAGCTGAGAAGGCTGAGAAGGTGGAAGAGGAGAGAATTCTCGGTTTGGATTTGAGCACAATGAACTACAATCAGCAGAAATATTATGAATGGCGTCAGAACGAGATTCTCGCTCGACGTTGCAATATCTAG
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| Protein seq | MRDLGSDLAWRGTQRLAATSRGEGPRRRPWRIDDDPISNGAPTAAKSSQGRTKNFTTQEDILLVSAWLNVGMDPIQGVDQSQGTYWAGIHEYFHANKEFESTRSESSLLNRWSAIQHDVNIFCGCMSRIEGRNQSGSRVDDKIANACELFKEEDKKHRKFNLMHCWNILKDKPEWMDNRKKVGCAKKPSNKKQKTTANSSHASVEPADLEIYYSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEWNKLEIEKFEFQKKEAEKAEKVEEERILGLDLSTMNYNQQKYYEWRQNEILARRCNI |
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| Function | Glutathione S-transferase T3 [UniProtKB/Swiss-Prot:Q9FHE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G023910 | OsN22_07G023910_01 | Chr07 | 25778092 | 25781422 | - | NAM | ||
| CDS seq | ATGAGGGACCTTGGCAGCGACCTTGCATGGAGAGGGACCCAGCGGCTGGCAGCGACCTCGCGTGGAGAGGGACCCCGGCGGCGACCTTGGCGGATTGACGATGATCCAATCTCCAATGGAGCTCCAACAGCTGCCAAGAGTTCTCAGGGTAGGACCAAAAATTTCACTACTCAAGAGGACATCCTTCTTGTGTCAGCTTGGTTGAATGTGGGCATGGATCCTATTCAAGGAGTAGATCAATCACAAGGCACATATTGGGCAGGAATACATGAATATTTTCATGCCAACAAAGAGTTTGAGTCAACACGTTCTGAATCCTCTTTATTGAATCGTTGGTCCGCAATACAACATGATGTGAATATTTTCTGTGGATGTATGTCCAGAATAGAGGGTAGGAACCAGAGTGGTTCTAGAGTTGATGACAAGATTGCAAATGCATGTGAATTGTTTAAGGAGGAAGACAAGAAGCATAGGAAGTTTAACTTGATGCATTGCTGGAATATCCTGAAGGACAAGCCTGAGTGGATGGACAATCGGAAGAAAGTTGGATGTGCCAAAAAACCAAGCAATAAGAAACAGAAGACAACGGCAAATTCAAGTCATGCATCAGTTGAACCTGCTGATCTTGAAATCTATTATTCTGATGCTCAACCATCTGTAAGACCGGATGGAAAGAAGGCGGCAAAACAGAAGCTACGACAGGGTAGAACCATAGAAGCAGTGGACTATCTGATGGAAAAGAAGAAAGAAGCTGATGTTGTGAGAGAGTTGAAGAAAGAAGAGATGTGCAAGAAAGCCTTTGCTTTGCAGGAAGAGAGGTGCAAGAGAGCCTTTGCTCTGCAGGAAGAATGGAACAAATTGGAGATAGAAAAGTTTGAGTTCCAGAAGAAAGAAGCTGAGAAGGCTGAGAAGGTGGAAGAGGAGAGAATTCTCGGTTTGGATTTGAGCACAATGAACTACAATCAGCAGAAATATTATGAATGGCGTCAGAACGAGATTCTCGCTCGACGTTGCAATATCTAG
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| Protein seq | MRDLGSDLAWRGTQRLAATSRGEGPRRRPWRIDDDPISNGAPTAAKSSQGRTKNFTTQEDILLVSAWLNVGMDPIQGVDQSQGTYWAGIHEYFHANKEFESTRSESSLLNRWSAIQHDVNIFCGCMSRIEGRNQSGSRVDDKIANACELFKEEDKKHRKFNLMHCWNILKDKPEWMDNRKKVGCAKKPSNKKQKTTANSSHASVEPADLEIYYSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEWNKLEIEKFEFQKKEAEKAEKVEEERILGLDLSTMNYNQQKYYEWRQNEILARRCNI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G023910 | OsN22_07G023910_03 | Chr07 | 25778073 | 25781421 | - | NAM | ||
| CDS seq | ATGGATCCTATTCAAGGAGTAGATCAATCACAAGGCACATATTGGGCAGGAATACATGAATATTTTCATGCCAACAAAGAGTTTGAGTCAACACGTTCTGAATCCTCTTTATTGAATCGTTGGTCCGCAATACAACATGATGTGAATATTTTCTGTGGATGTATGTCCAGAATAGAGGGTAGGAACCAGAGTGGTTCTAGAGTTGATGACAAGATTGCAAATGCATGTGAATTGTTTAAGGAGGAAGACAAGAAGCATAGGAAGTTTAACTTGATGCATTGCTGGAATATCCTGAAGGACAAGCCTGAGTGGATGGACAATCGGAAGAAAGTTGGATGTGCCAAAAAACCAAGCAATAAGAAACAGAAGACAACGGCAAATTCAAGTCATGCATCAGTTGAACCTGCTGATCTTGAAATCTATTATTCTGATGCTCAACCATCTGTAAGACCGGATGGAAAGAAGGCGGCAAAACAGAAGCTACGACAGGGTAGAACCATAGAAGCAGTGGACTATCTGATGGAAAAGAAGAAAGAAGCTGATGTTGTGAGAGAGTTGAAGAAAGAAGAGATGTGCAAGAAAGCCTTTGCTTTGCAGGAAGAGAGGTGCAAGAGAGCCTTTGCTCTGCAGGAAGAATGGAACAAATTGGAGATAGAAAAGTTTGAGTTCCAGAAGAAAGAAGCTGAGAAGGCTGAGAAGGTGGAAGAGGAGAGAATTCTCGGTTTGGATTTGAGCACAATGAACTACAATCAGCAGAAATATTATGAATGGCGTCAGAACGAGATTCTCGCTCGACGTTGCAATATCTAG
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| Protein seq | MDPIQGVDQSQGTYWAGIHEYFHANKEFESTRSESSLLNRWSAIQHDVNIFCGCMSRIEGRNQSGSRVDDKIANACELFKEEDKKHRKFNLMHCWNILKDKPEWMDNRKKVGCAKKPSNKKQKTTANSSHASVEPADLEIYYSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEWNKLEIEKFEFQKKEAEKAEKVEEERILGLDLSTMNYNQQKYYEWRQNEILARRCNI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G023910 | OsN22_07G023910_02 | Chr07 | 25778073 | 25781421 | - | NAM | ||
| CDS seq | ATGCATTGCTGGAATATCCTGAAGGACAAGCCTGAGTGGATGGACAATCGGAAGAAAGTTGGATGTGCCAAAAAACCAAGCAATAAGAAACAGAAGACAACGGCAAATTCAAGTCATGCATCAGTTGAACCTGCTGATCTTGAAATCTATTATTCTGATGCTCAACCATCTGTAAGACCGGATGGAAAGAAGGCGGCAAAACAGAAGCTACGACAGGGTAGAACCATAGAAGCAGTGGACTATCTGATGGAAAAGAAGAAAGAAGCTGATGTTGTGAGAGAGTTGAAGAAAGAAGAGATGTGCAAGAAAGCCTTTGCTTTGCAGGAAGAGAGGTGCAAGAGAGCCTTTGCTCTGCAGGAAGAATGGAACAAATTGGAGATAGAAAAGTTTGAGTTCCAGAAGAAAGAAGCTGAGAAGGCTGAGAAGGTGGAAGAGGAGAGAATTCTCGGTTTGGATTTGAGCACAATGAACTACAATCAGCAGAAATATTATGAATGGCGTCAGAACGAGATTCTCGCTCGACGTTGCAATATCTAG
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| Protein seq | MHCWNILKDKPEWMDNRKKVGCAKKPSNKKQKTTANSSHASVEPADLEIYYSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEWNKLEIEKFEFQKKEAEKAEKVEEERILGLDLSTMNYNQQKYYEWRQNEILARRCNI |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G023910 | OsN22_07G023910_04 | Chr07 | 25780916 | 25781421 | - | IsoSeq | ||
| CDS seq | TCGCGCACTTCTCCAATCGCCTCTCCTCCACCGCGCCCTCCGCCCCCCTCCCCTCTCGCCTCCTCCTCTGATCCGCCGCCCTACCCTCCCCCTCCCCCTCCCCCTCCGCCCTCCTCTCCCAGCCGGCGAGCAGCGTCGCCCTCTCCGTCGGCCTCCCACCGGCGGCGACCTCAGCACGGAGAGGGATGGGTGCGGCGACCTCCGCGCGAAGAGGGACCCGGCGGCCGGCGGCGACCTCCCGCAATGAGGGACCTTGGCAGCGACCTTGCATGGAGAGGGACCCAGCGGCTGGCAGCGACCTCGCGTGGAGAGGGACCCCGGCGGCGACCTTGGCGGATTGAC
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| Protein seq | SRTSPIASPPPRPPPPSPLASSSDPPPYPPPPPPPPPSSPSRRAASPSPSASHRRRPQHGEGWVRRPPREEGPGGRRRPPAMRDLGSDLAWRGTQRLAATSRGEGPRRRPWRID |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr07 | 25779307 | 25781076 | - | OsN22_07G023910_03 | OsN22_07G023910_01,OsN22_07G023910_03 | All |
| SE | Chr07 | 25778904 | 25781076 | - | OsN22_07G023910_03 | OsN22_07G023910_02,OsN22_07G023910_03 | All |
| SE | Chr07 | 25778904 | 25781076 | - | OsN22_07G023910_01 | OsN22_07G023910_02,OsN22_07G023910_01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.711512 | 0.0 | 2.050939 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0554400 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g42560 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0554400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0019140 | SBH | 0.120401 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0019030 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0020360 | SBH | 0.252479 | 0.294502 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0026250 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0451800 | RBH | 0 | 0 | 0.0648805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0026740 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0464200 | RBH | 0 | 0 | 0.0106175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0012570 | SBH | 0.033126 | 0.061632 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0026450 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0026100 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0019040 | SBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0012600 | SBH | 0.098635 | 4.618469 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0023930 | RBH | 8.431509 | 30.768583 | 7.627371 |
