Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0026100 | OGI:01039680 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:28235924-28237988 | ||||||||
| Gene Symbol | IBP, - | ||||||||||
| DNA seq | ttatgcttgagctgaacgatgacttagaatttgattcttaacatttttatagtactcctgctcctcgatgctcattgcactagtatcagtcctcaaaagcttatcttcttttatcattctcttgaactcgaacttgtctctctccaaatcaatccgcttttgctcaagtgcaaaagcgatttggtacctctcctcaaactttcgctccttctccgcatcggcctctttcttcttatcccatagatagtctaaggactctttccgtgatagatccgagcgttcgcacatctgttgtttcgccttcttcctccccatgggtcttccctcacctactgtattctcaggatcagcagccctattctcatcaacattacatgcaggagtagatatcgcaggagaatcattggcggtcttcttctgcttcttgcttgaagttttactagctgccagctgattccacttatcattccactttggcagattctttaaaacgttgtagcaatgcatgaactgaaacttcttCCTCTTTCTTCTTGTACATCAGGCTTGCTTGCACATGCTGCAAATAAATGAACTGAAGTCAGAAACATAAAGGAGACGATTGGAAAATAAGCAACACAAGCAATATATTACCATGTCCTCATGATTGACACCACTCTGATTTCGATTCTGAATCTGACTTAAGAAACCACAATACTTATTGACATGTTCTTGTATAGTGGACCAACGATGTACAAGTGAATTTTGGGAGCGATCTGATTCGAATTCCTTGTTCTGATGAAAGTAGTCATGAATACGTCCCCAATATGTACCGTGAGATTGATCCATCCCTTGAACCGGATCGAAAGAAACATTTATCCACGCCGACACCAAAAGGTTGTCCTCCTCCAAACTGAAATTtttttgatcttttttggttcggtctcacagcaacattttcattcacaactggttcttgttcatcatcatactggcttcccatctcactcgagccaaaatggttgctctcatcattgatcaagtttatgtaatatcgctctcgctccatatcatctgtccatagataaaaaatcataaccttgtacttgagaaaaaaaaaagactaacaaaacacaaacaagtgataatttctggacaaaaaatgcattctgttatttgaaagttcacatgtattggatggtgacaactttgtgtacacataatattaatcaaaagctgtgcattcgcatggagagagcacacaaatgttgctaatttggatactgaaaatgacaaggttcatagaaatgttcctatatcgatcctgacagcgacaaggttcagataactgttcaacaggtcaaatttcagagcatcgtatatgaaactcagtacatactgaatttccattgtgtcaaactcagagcataaatttgatagcatattatactcactacacagtgtcaaactgaaattccagcacaacaccactgagtattctttcctgcatgctgtacataccctatatacttctggacataaatgcaggatatacaccacagtgaagtacatcagcacatacagcagacatacccttgttcaagtcaggcaattttgctacaattgcaagcatacacaaaagaacatgatgaaaatttctgaaaatgcaacctctatcagatagtataaattagacaatactatccagattgaagaaaaaaGAAAGCACAATTAAGAAAGCTTCAGATGTGAAGGAATTCAGAGCATGTAAACTAAACACTGAACAAATCAGGATTGGACTTACCGAAATTGCTCATGTGGAGGAATTCTTCGTCACCTACAGTCCATACTCTGGAGGAACTGCCGATAGAAGCTTCGTGTGAGAGGAGATCCAGTGGCTCGCTAGATGTCAGCTTCTCCATGGCCTCGGATGCCTAAAAACCGGAGTAGCGTTGTGGAGGGCGCgcgcatggccggcgggcggcggtggggggcgcgcatggccgccaggcggtggtggagggcacggatggccgccgggccagaactcgccgtactgcggaaacggcatacctccggccgtcat
More
|
||||||||||
| CDS seq | atgacggccggaggtatgccgtttccgcagtacggcgagttctggcccggcggccatccgtgccctccaccaccgcctggcggccatgcgcgccccccaccgccgcccgccggccatgcgcGCGCCCTCCACAACGCTACTCCGGCATCCGAGGCCATGGAGAAGCTGACATCTAGCGAGCCACTGGATCTCCTCTCACACGAAGCTTCTATCGGCAGTTCCTCCAGAGTATGGACTGTAGGTGACGAAGAATTCCTCCACATGAGCAATTTCGatgatatggagcgagagcgatattacataaacttgatcaatgatgagagcaaccattttggctcgataggtgagggaagacccatggggaggaagaaggcgaaacaacagatgtgcgaacgctcggatctatcacggaaagagtccttagactatctatgggataagaagaaagaggccgatgcggagaaggagcgaaagtttgaggagaggtaccaaatcgcttttgcacttgagcaaaagcggattgatttggagagagacaagttcgagttcaagagaatgataaaagaagataagcttttgaggactgatactagtgcaatgagcatcgaggagcaggagtactataaaaatgttaagaatcaaattctaagtcatcgttcagctcaagcataa
More
|
||||||||||
| Protein seq | MTAGGMPFPQYGEFWPGGHPCPPPPPGGHARPPPPPAGHARALHNATPASEAMEKLTSSEPLDLLSHEASIGSSSRVWTVGDEEFLHMSNFDDMERERYYINLINDESNHFGSIGEGRPMGRKKAKQQMCERSDLSRKESLDYLWDKKKEADAEKERKFEERYQIAFALEQKRIDLERDKFEFKRMIKEDKLLRTDTSAMSIEEQEYYKNVKNQILSHRSAQA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0026100 | OsGoSa_07g0026100.01 | Chr07 | 28235924 | 28237988 | - | NAM | ||
| CDS seq | atgacggccggaggtatgccgtttccgcagtacggcgagttctggcccggcggccatccgtgccctccaccaccgcctggcggccatgcgcgccccccaccgccgcccgccggccatgcgcGCGCCCTCCACAACGCTACTCCGGCATCCGAGGCCATGGAGAAGCTGACATCTAGCGAGCCACTGGATCTCCTCTCACACGAAGCTTCTATCGGCAGTTCCTCCAGAGTATGGACTGTAGGTGACGAAGAATTCCTCCACATGAGCAATTTCGatgatatggagcgagagcgatattacataaacttgatcaatgatgagagcaaccattttggctcgataggtgagggaagacccatggggaggaagaaggcgaaacaacagatgtgcgaacgctcggatctatcacggaaagagtccttagactatctatgggataagaagaaagaggccgatgcggagaaggagcgaaagtttgaggagaggtaccaaatcgcttttgcacttgagcaaaagcggattgatttggagagagacaagttcgagttcaagagaatgataaaagaagataagcttttgaggactgatactagtgcaatgagcatcgaggagcaggagtactataaaaatgttaagaatcaaattctaagtcatcgttcagctcaagcataa
More
|
|||||||
| Protein seq | MTAGGMPFPQYGEFWPGGHPCPPPPPGGHARPPPPPAGHARALHNATPASEAMEKLTSSEPLDLLSHEASIGSSSRVWTVGDEEFLHMSNFDDMERERYYINLINDESNHFGSIGEGRPMGRKKAKQQMCERSDLSRKESLDYLWDKKKEADAEKERKFEERYQIAFALEQKRIDLERDKFEFKRMIKEDKLLRTDTSAMSIEEQEYYKNVKNQILSHRSAQA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0013050 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0012900 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0012870 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0012790 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0026250 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0451800 | RBH | 0 | 0 | 0.0648805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0026740 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0464200 | RBH | 0 | 0 | 0.0106175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0012680 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0026450 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0016130 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0012750 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G012710 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0012550 | SBH | 0.0 | 0.0 | 0.0 |
