Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsN22_03G032890		OGI:03083480 \| 16/16			N22 \| OsN22RS2 \| Gramene(+IsoSeq)			Chr03:32423244-32429757		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		SCP19, OsSCP19
DNA seq		ATTATAAGCTTGAGCTTTACTTAGTTCCACAAAAAAAAAAACTGTTGACAAAAAAACTCAGATCTTCAAGCTGCCAGAGCACTGAAAAAGGAAGCAAAGCAATGGTCTTGGAGCTTCTCACAATGGCTGCTCACCGCGTGGGGCGATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCACCTTGAGACCGGGTAAGGGGCTCCCTGTATGTTTTCTTTTCTCCAGCTGTTACATATGACTTTTAATCGAAGGGAAATTGGAAACTCAAACGCAAAAGGGAATCGAATCCCAGGGGAATTAGGCCATCCACAATGGGTGCCCCCAGGTCGTGCCCCTAGCGACGGCGGCAAACTTTTCCGTCCGCGCCGTCCCCCCGCGATGGAGCGCGTCCCTCTGCTGAGGGACGCGGCTCTCTCCGCTCCCCGCCAGCTTTTCGTGGGGAGCTGCAGCCAGGCGACGCGTTGGGGGGCTTCGGCGCTTGTGGACACGGTTTCCTCGCTTGCGATTTCCCCTTCTACCCTCGACCTCGTCGCTGGGAGGAGGCCGACGGCGGTGGGGAAGAACGCGAGGCGGCGGCGAGAGAGACAGGCGGCATCGCCGAGCTGTGAGGAGGGAGGCGGCGTCGAGAGAGAAGAGAGAGGCGACGGCGACGACGACCGGATCCACGGCGGCGACGACGGATCCGCGGCGACGACGACGGATCCGCGGCGACGACGACGGATCCGCGGTGACGACGACAGGATCCGCGACGGCGACCACGGATCCGCGGCGACGACGACCGGATCCGGCGGAGCAGTGACCGCGTCGTGGCGGCGCCGCCGTCGCCACCGCTTGAGGCGCCCGTGGTCGCTGCCGTCAGCCGCCGCGCGGAGACGGGCGGCCTCTTCAACCTCCGCCTTGGCCTCGACCTCGGCCACCGCGACCTCGTCCACCTTCGACTTGGCCTCCTCCGCGCGGCGGCGAGAGAGAGGCAAGCAGCGGTGACGCAAGAGAGAGGAGAAAGCGGCGGCGGCGACGGCTGGGGAGGGAGGTGGCGCCGGCGCTCGTGGGAGAGAGAGGGAGAGGAAGGGGGAGGACGGCGACGACGCCGAGTTGAGGAAGCGAGGCGGGTCCGAGCGAAGAAAAAAAGAAGAGGAGGGGAAAGAGGCGGAGAAAAAAAGAGGAAAGAGAGAGAGGGTGGGGGCGGGGAGGGAGAGGGGTAGTATAGTAAAGTACCCACTGTGGGTTTGTTTTGTTGGGACACCCATTATGAGTTGAGTGTCTTTATCCAGTTGCTTCAGATTTTGAGGAGCCCATTCAGAGGTGTCTACCATTGCGAGCCGAGTTCCCCTACGAGTGTCCTCAGTTAGTGAGGACATTTTAGAAGTGGCTCACATTGTGGATGCCCTTAGGAGTAGAGCAGACGACTCGTTTTGCTTGATTTGGTTGGTTTCTGACTTTCTGCAGAGAGAATGGTATGGGATGCCACTACGTATTTACACTATTCTCTGTTGAAAAATAAATTTATTTTGTCAGTGAATCTGGGACAGTGGGACTGAGGGTGTACATGGCTTAGGGAGACGCTGATCCGCGGCTGCAGGCGCGTGGTCAGTTTCCACCCTTTCGTCCTCCCCCATATACTACTGTATGTACTCTCTCCGTCCAGAATATAGCAAACTAGAACCGAACGGGATGTATCTTAGTACTACGAATCTGGACATGTCCCTGTTCAGATTCGTAGTACTAAGATACGTCCCATCCGATCTTAGGTTGCTATATTCTGGGACGGAGGGAGTATGTATATATAACCATATACGCATATACTTCCTCTGTTTCACAATGTAAGTTATTCTAGTATTTTCCACATTTATATTGATGTATGTTTAGATTTATTAACATCAATATAAAAGTGAAAAATGCTAGAATGACTTACATTGTGAAACGAAGAAAATACTTAGAATTTATACATAAACTATATAGGTATAGAGTTTATAGGTATACATGTAAAGTTATAAAGTTTGCATGTATAGGGTAGAAAAAATATATATTTGGTGGGTCCGAAACTGATAGCCGGTGCCACCCTGCTAACGACTGATTGCTAATTAGCGATTCGAAATGGTTTGGATTAAGTAATTACCTTATTATAGTGTATAGCAATTCTAATATTTTAAGTTATTTCTCGGTTCCTAATATTAAAAAAACGTATTTACCCGTTACAATGCACGGATATTTTTTCTAGCTGGACCTTAATTGAGAAATAACCTTGCAGGTATGTTGGTGTGGACGAGGAGACGGGCACTGAGCTCTTCTACTACTTCGTTGAATCGGAGAGGAGCCCAAGTACAGGCCCTGTGATCCTCTGGTTGACAGGCGGGCCTGGCTGCTCCGGATTCAGCGGTGTCGTCTTTGAAGTAGGTTAGTAGTAGTGATTGGGATTTGATGATGAGAAAAAGATTTGTAGAACTGACAGAGACTATGCTTTCATTGCTCTAAGGTTAATACTATTCTCATGTTGGCTCAATCGAATATAAATTATGCATGATTTTTTGAGTTAATAAATTATGCATGATTATATATATTTTTGAGTAAATTACATCATCGGTAAACAAACTTATCATGTGGGTGCAATCTAGTGCACGAATTTGTAAAATGCTCGTTTTGGTGCATGAATTTGTCTGGTGTGTGTGCGGGGAAAAACCAAAAATACGCTACGTAGCTAATCTTGTTGATTTAGAGGTTGATTAGCATACTAGGTAAACACACACACACATGAGAAGATTGTTGTTAGATATACACCTCTTCATAAAAAGATAGAATATGATATAGTGATTGTAAAAAGATAATGATTGATATAAGGGTTAGAAATATATGAAATTCATCATTACCATGATAAAGGATAAAATAGAAACCAAAATTATAAATATAATATGTCTTATGCATACTCATTACACATATACACGTCACGTCCTGATAAACATCAACTTCGTAAAATTAACATTGATAAGCCATTTTAGTCATGGTTTGCACGAACTGGAAACGAACACTTTACAAGTTGATATACTAAATTACACCCACCTAACACATATTCGTGCATGATTATATGGTGGCCAAGATTGTACAGTTTGCCATGGTTTTGGACTACTGGGGAGCAATTGGGTCTGCTCCTAGGCTCTGTGCTCTCTACACTCACACATATTTTACATTGTACGTGTTAACCTTCTGATATCCATAGGTGACGATTATGTACAGGACCTATGAAATACGTGTTGGAGCCTTATAATGGTAGTTTGCCACGATTGGTTTATAATCAGTATTCATGGACACAGGTGATATGCTCCTCTAAAACACACAGGATATTTCTCTCTACCTCATTTTACTTATTTGTGGTTCTGTTACTATGATCAGATGGCAAGCATCCTCTTCTTGGACACTCCTGTTGGTTCTGGTTTCTCATACGCTCATGATCCTAAAGGTTATAATGTCGGGGACATATCATCGTCTTTGCAAGTCGTAACATTTCTGAAGAAGGTGACCTGAAAGCACATCTGGTTTTCTACTACAGTAAAAATGGAAGAACAACTTCTATATTTATTACTTACCATCTTGTACGTACTAGTGTAGTGGTTCAATGATCACCCACGCTATCTCTCAAATCATTTCTATGTTGGAGGAAGCTCATACGCTGGAAAGGTGATTCCAATTATCATGAAGTTCATTTCAGAAGGTAATCAACTATATATTTCACATATTCTGCGATGAATTAGATGAGAAGATTTTTTTTAGATAATGGAATATAATCCCGACCTTTGCTCAAAGAGTTACAGCCAATTATTACACCAACTTAACAAAAATTCACACCTGAATAAACAAAAGCACAGACAAACTAATAAAAACTCACACAGCATAAAAAGACCACAAAAATTATTGAATTTTATTTGTGAATCTCCATCGAAAGTTGGCGAACAGCTGCATAACCAATGACTCAAGATTACGACATGCACCTTTCACTGACTTGATTTCTTCATCACACTTTAGTAGCTGAACCCAAGATCAGAGCCAGTATGTTGCCTTGAAAAGATTTTTTATTAACTCCCACAAGCCAATTCTCAAAAATATAAGATATACTATGAGGAGATAATTTCGGAAATCATCTAATGTATATGTTTTAGAACCTCTGTTGTGTTATATAAAAGATGCAAAAAGTGTTCAGCGGAAAGTTCAAACTAATCTCAAAAGACAAATGGTGCATTTGTTTGTTAATTTCTTCAGAGTGATAAGCTCACTATGTTTTCAACCTTTGAACTTCAATTCGCCACAAACCAATTAATGTTTGCATCTACTTATGTTTAATCGTTACCTCCAATCAAATAACTAATTCCTTACCTCGTTTGGTTTATGCCTGCTCTCCAGGAATTGAACAAAGGCAGCAGCCATTGGTTAATCTTAAGGCATGGCATTCTGTATCCTTCAAACAACTAGTGACCTTTGCATAGTTAATAATGTGGCATCATGTTTCTTATATTCTTTTTGGTGCTTATATATGAAATCAGTTACAGGGGTATATAGTTGGCAACCCCATTACAGGCTCGAAGATTGATGATAATTTCAAAATTCCATATTCTCATGGTGTTGGGATCATATCTGATCAATTATACGAGGTAATTTCACATCCATACAATTAGAATATGGTGATACAACTCTGTAGCATTTTCCTTTCCCTGTTTGTAGGCTGCAGTAGCAAACTGCAATGGAGATTATGTGACCACAACAAATGAATTATGTGCTAAGGCCCTAAATGCTATTGATAATGTAAGATTCTTGTCTAACCTAGTTTAGAAGTTTACTAATATCCAACTACTATCAAACTTATGCATATCCCTTTTGTTTCAGCTCATGTCTGAAGTTGATTATGGAAATATCTTGGATGATAAATGTGTTCGTGCTACACCAAAACCCATAAATGAAGTTTCAAGAAGTAGGAGTCTGCTAGAAGATTACATTCGGCTAAGTGAGCCGACTGTTCGACCTACTATCAATTGTTTTGTAAGTTATTATCATTCATCGATCCCATTGTGTTAGTTTGATTGAAGATTGTAGTTTTTTTTTTAAAGAAGCAGTATAAAGAGATTGTAATGATACATTATATCACAACTCTGTTTTTTCCTAATGTTAATCTGCCTCCTGTTTTTCTTCTTAAATGCAGTCATACCGTTACTATCTATCATTCTTGTGGATGAACAACAATTTGACTAGAGAAGCTCTTAAGATCAAGAAGGTAACCATTCGTTATCTTTTGCCTGTATAATTAGGACCCTACAATGTGTTTCCCTTCTAAGATTTCTTGCGAAGCTTAAATGAGAAGAGTATAAGATGCCATCTATACAAAGTATGATTTGCTAGCTAGGAAAAGCTTCCATTATTTTTTTAAAAAAGTTGGCTAAATATAACAAATCCAATAATGGCGCAAATATGACAATAGGGAACAGTCGGCGAATGGATAAGATGCAAGACAGGGCTACCCTATGTTCAAGATGTCGCAAGCAGCATCAAGTATCATTTTGACCTCACCACAGGAGGTTACCGGGCACTTGTGTTCAGGTGAAATCATCAGAGGAAAATTCATTTATCTGCTTCCTGCAGGTTAAATCCATATTCCATGTCTTAAAAATTATTATGACATTTATGAATGCAGTGGTGACCATGATCTCATATTGCCATTTCTGAGCACCCAGGCATGGATAAGATCCTTGAACTTCTCCATAGTTGATGAGTGGAGAGCATGGCATGTGGATGGCCAGGCTGCAGGGTTAAGCCATCTGTTTCTGCTCACAAATTGTGCATTTCAATTGATGTTTTTTCCATGTTTGCCTGATCTGATATTAATATTATGTGTCATCTTCTTTTATGCAGATTTACAATTTTGTACGCCAACAACTTGACCTTTGCCACAGTAAAGGTGTTACTTTTTCTTTCTTGACCTTTTCTCGTTAAACTGGTATTTGTGTCTATAGTGTCCAGCCCTTCACAATTCACATACTGGCTTTCTGAAGAATCCTAAACAAGGTTTATGATGTGCAGGGTGGTGGCCATACCTCTATAGAAACCAATCCTAAACAAGGTTTTGCCATGGGCAAACGTTGGCTAGATAATAAGCCTCTGTGATGTTCACCTGCTTTGACCCAACCTGTATACTCGTGCAACTGGTATTGTTTGTATGAAGAACTACTTTATCTCCCATGTTTTCCAACAACGAATAGAAGACAAGATAAATACTCCGCCAAATAGAGGGTCCAGTACTGACCAAATTGAAAAATGGAGAGAAAAAAAATCCTGATCAGTTGTAGAAGTACTAGCTCGGGTTGCTACTACAACTTTGGGATGCAAAATGCAAATGCACCCGGTCAAACCACTTTGACCACACGAGGTTTTTACCCACT More
CDS seq		ATGGTCTTGGAGCTTCTCACAATGGCTGCTCACCGCGTGGGGCGATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCACCTTGAGACCGGGAGCCCAAGTACAGGCCCTGTGATCCTCTGGTTGACAGGCGGGCCTGGCTGCTCCGGATTCAGCGGTGTCGTCTTTGAAGTAGGACCTATGAAATACGTGTTGGAGCCTTATAATGGTAGTTTGCCACGATTGGTTTATAATCAGTATTCATGGACACAGATGGCAAGCATCCTCTTCTTGGACACTCCTGTTGGTTCTGGTTTCTCATACGCTCATGATCCTAAAGGTTATAATGTCGGGGACATATCATCGTCTTTGCAAGTCGTAACATTTCTGAAGAAGTGGTTCAATGATCACCCACGCTATCTCTCAAATCATTTCTATGTTGGAGGAAGCTCATACGCTGGAAAGTTACAGGGGTATATAGTTGGCAACCCCATTACAGGCTCGAAGATTGATGATAATTTCAAAATTCCATATTCTCATGGTGTTGGGATCATATCTGATCAATTATACGAGGCTGCAGTAGCAAACTGCAATGGAGATTATGTGACCACAACAAATGAATTATGTGCTAAGGCCCTAAATGCTATTGATAATCTCATGTCTGAAGTTGATTATGGAAATATCTTGGATGATAAATGTGTTCGTGCTACACCAAAACCCATAAATGAAGTTTCAAGAAGTAGGAGTCTGCTAGAAGATTACATTCGGCTAAGTGAGCCGACTTCATACCGTTACTATCTATCATTCTTGTGGATGAACAACAATTTGACTAGAGAAGCTCTTAAGATCAAGAAGGGAACAGTCGGCGAATGGATAAGATGCAAGACAGGGCTACCCTATGTTCAAGATGTCGCAAGCAGCATCAAGTATCATTTTGACCTCACCACAGGAGGTTACCGGGCACTTGTGTTCAGTGGTGACCATGATCTCATATTGCCATTTCTGAGCACCCAGGCATGGATAAGATCCTTGAACTTCTCCATAGTTGATGAGTGGAGAGCATGGCATGTGGATGGCCAGGCTGCAGGATTTACAATTTTGTACGCCAACAACTTGACCTTTGCCACAGTAAAGGGTGGTGGCCATACCTCTATAGAAACCAATCCTAAACAAGGTTTTGCCATGGGCAAACGTTGGCTAGATAATAAGCCTCTGTGA More
Protein seq		MVLELLTMAAHRVGRCMLLQPPRLATCVLFLLLPLLLPCSASSSVITHLPGFHGRLPFHLETGSPSTGPVILWLTGGPGCSGFSGVVFEVGPMKYVLEPYNGSLPRLVYNQYSWTQMASILFLDTPVGSGFSYAHDPKGYNVGDISSSLQVVTFLKKWFNDHPRYLSNHFYVGGSSYAGKLQGYIVGNPITGSKIDDNFKIPYSHGVGIISDQLYEAAVANCNGDYVTTTNELCAKALNAIDNLMSEVDYGNILDDKCVRATPKPINEVSRSRSLLEDYIRLSEPTSYRYYLSFLWMNNNLTREALKIKKGTVGEWIRCKTGLPYVQDVASSIKYHFDLTTGGYRALVFSGDHDLILPFLSTQAWIRSLNFSIVDEWRAWHVDGQAAGFTILYANNLTFATVKGGGHTSIETNPKQGFAMGKRWLDNKPL
Function		Serine carboxypeptidase-like 18 [UniProtKB/Swiss-Prot:Q9C7Z9]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_03G032890	OsN22_03G032890_03	Chr03	32423345	32429599	+	NAM
CDS seq	ATGGTCTTGGAGCTTCTCACAATGGCTGCTCACCGCGTGGGGCGATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCACCTTGAGACCGGGAGCCCAAGTACAGGCCCTGTGATCCTCTGGTTGACAGGCGGGCCTGGCTGCTCCGGATTCAGCGGTGTCGTCTTTGAAGTAGGACCTATGAAATACGTGTTGGAGCCTTATAATGGTAGTTTGCCACGATTGGTTTATAATCAGTATTCATGGACACAGATGGCAAGCATCCTCTTCTTGGACACTCCTGTTGGTTCTGGTTTCTCATACGCTCATGATCCTAAAGGTTATAATGTCGGGGACATATCATCGTCTTTGCAAGTCGTAACATTTCTGAAGAAGTGGTTCAATGATCACCCACGCTATCTCTCAAATCATTTCTATGTTGGAGGAAGCTCATACGCTGGAAAGTTACAGGGGTATATAGTTGGCAACCCCATTACAGGCTCGAAGATTGATGATAATTTCAAAATTCCATATTCTCATGGTGTTGGGATCATATCTGATCAATTATACGAGGCTGCAGTAGCAAACTGCAATGGAGATTATGTGACCACAACAAATGAATTATGTGCTAAGGCCCTAAATGCTATTGATAATCTCATGTCTGAAGTTGATTATGGAAATATCTTGGATGATAAATGTGTTCGTGCTACACCAAAACCCATAAATGAAGTTTCAAGAAGTAGGAGTCTGCTAGAAGATTACATTCGGCTAAGTGAGCCGACTTCATACCGTTACTATCTATCATTCTTGTGGATGAACAACAATTTGACTAGAGAAGCTCTTAAGATCAAGAAGGGAACAGTCGGCGAATGGATAAGATGCAAGACAGGGCTACCCTATGTTCAAGATGTCGCAAGCAGCATCAAGTATCATTTTGACCTCACCACAGGAGGTTACCGGGCACTTGTGTTCAGATTTACAATTTTGTACGCCAACAACTTGACCTTTGCCACAGTAAAGGGTGGTGGCCATACCTCTATAGAAACCAATCCTAAACAAGGTTTTGCCATGGGCAAACGTTGGCTAGATAATAAGCCTCTGTGA More
Protein seq	MVLELLTMAAHRVGRCMLLQPPRLATCVLFLLLPLLLPCSASSSVITHLPGFHGRLPFHLETGSPSTGPVILWLTGGPGCSGFSGVVFEVGPMKYVLEPYNGSLPRLVYNQYSWTQMASILFLDTPVGSGFSYAHDPKGYNVGDISSSLQVVTFLKKWFNDHPRYLSNHFYVGGSSYAGKLQGYIVGNPITGSKIDDNFKIPYSHGVGIISDQLYEAAVANCNGDYVTTTNELCAKALNAIDNLMSEVDYGNILDDKCVRATPKPINEVSRSRSLLEDYIRLSEPTSYRYYLSFLWMNNNLTREALKIKKGTVGEWIRCKTGLPYVQDVASSIKYHFDLTTGGYRALVFRFTILYANNLTFATVKGGGHTSIETNPKQGFAMGKRWLDNKPL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_03G032890	OsN22_03G032890_01	Chr03	32423345	32429757	+	NAM
CDS seq	ATGGTCTTGGAGCTTCTCACAATGGCTGCTCACCGCGTGGGGCGATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCACCTTGAGACCGGGAGCCCAAGTACAGGCCCTGTGATCCTCTGGTTGACAGGCGGGCCTGGCTGCTCCGGATTCAGCGGTGTCGTCTTTGAAGTAGGACCTATGAAATACGTGTTGGAGCCTTATAATGGTAGTTTGCCACGATTGGTTTATAATCAGTATTCATGGACACAGATGGCAAGCATCCTCTTCTTGGACACTCCTGTTGGTTCTGGTTTCTCATACGCTCATGATCCTAAAGGTTATAATGTCGGGGACATATCATCGTCTTTGCAAGTCGTAACATTTCTGAAGAAGTGGTTCAATGATCACCCACGCTATCTCTCAAATCATTTCTATGTTGGAGGAAGCTCATACGCTGGAAAGTTACAGGGGTATATAGTTGGCAACCCCATTACAGGCTCGAAGATTGATGATAATTTCAAAATTCCATATTCTCATGGTGTTGGGATCATATCTGATCAATTATACGAGGCTGCAGTAGCAAACTGCAATGGAGATTATGTGACCACAACAAATGAATTATGTGCTAAGGCCCTAAATGCTATTGATAATCTCATGTCTGAAGTTGATTATGGAAATATCTTGGATGATAAATGTGTTCGTGCTACACCAAAACCCATAAATGAAGTTTCAAGAAGTAGGAGTCTGCTAGAAGATTACATTCGGCTAAGTGAGCCGACTTCATACCGTTACTATCTATCATTCTTGTGGATGAACAACAATTTGACTAGAGAAGCTCTTAAGATCAAGAAGGGAACAGTCGGCGAATGGATAAGATGCAAGACAGGGCTACCCTATGTTCAAGATGTCGCAAGCAGCATCAAGTATCATTTTGACCTCACCACAGGAGGTTACCGGGCACTTGTGTTCAGTGGTGACCATGATCTCATATTGCCATTTCTGAGCACCCAGGCATGGATAAGATCCTTGAACTTCTCCATAGTTGATGAGTGGAGAGCATGGCATGTGGATGGCCAGGCTGCAGGATTTACAATTTTGTACGCCAACAACTTGACCTTTGCCACAGTAAAGGTGTTACTTTTTCTTTCTTGA More
Protein seq	MVLELLTMAAHRVGRCMLLQPPRLATCVLFLLLPLLLPCSASSSVITHLPGFHGRLPFHLETGSPSTGPVILWLTGGPGCSGFSGVVFEVGPMKYVLEPYNGSLPRLVYNQYSWTQMASILFLDTPVGSGFSYAHDPKGYNVGDISSSLQVVTFLKKWFNDHPRYLSNHFYVGGSSYAGKLQGYIVGNPITGSKIDDNFKIPYSHGVGIISDQLYEAAVANCNGDYVTTTNELCAKALNAIDNLMSEVDYGNILDDKCVRATPKPINEVSRSRSLLEDYIRLSEPTSYRYYLSFLWMNNNLTREALKIKKGTVGEWIRCKTGLPYVQDVASSIKYHFDLTTGGYRALVFSGDHDLILPFLSTQAWIRSLNFSIVDEWRAWHVDGQAAGFTILYANNLTFATVKVLLFLS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_03G032890	OsN22_03G032890_02	Chr03	32423345	32429757	+	NAM
CDS seq	ATGGTCTTGGAGCTTCTCACAATGGCTGCTCACCGCGTGGGGCGATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCACCTTGAGACCGGGAGCCCAAGTACAGGCCCTGTGATCCTCTGGTTGACAGGCGGGCCTGGCTGCTCCGGATTCAGCGGTGTCGTCTTTGAAGTAGGACCTATGAAATACGTGTTGGAGCCTTATAATGGTAGTTTGCCACGATTGGTTTATAATCAGTATTCATGGACACAGATGGCAAGCATCCTCTTCTTGGACACTCCTGTTGGTTCTGGTTTCTCATACGCTCATGATCCTAAAGGTTATAATGTCGGGGACATATCATCGTCTTTGCAAGTCGTAACATTTCTGAAGAAGTGGTTCAATGATCACCCACGCTATCTCTCAAATCATTTCTATGTTGGAGGAAGCTCATACGCTGGAAAGTTACAGGGGTATATAGTTGGCAACCCCATTACAGGCTCGAAGATTGATGATAATTTCAAAATTCCATATTCTCATGGTGTTGGGATCATATCTGATCAATTATACGAGGCTGCAGTAGCAAACTGCAATGGAGATTATGTGACCACAACAAATGAATTATGTGCTAAGGCCCTAAATGCTATTGATAATCTCATGTCTGAAGTTGATTATGGAAATATCTTGGATGATAAATGTGTTCGTGCTACACCAAAACCCATAAATGAAGTTTCAAGAAGTAGGAGTCTGCTAGAAGATTACATTCGGCTAAGTGAGCCGACTTCATACCGTTACTATCTATCATTCTTGTGGATGAACAACAATTTGACTAGAGAAGCTCTTAAGATCAAGAAGGGAACAGTCGGCGAATGGATAAGATGCAAGACAGGGCTACCCTATGTTCAAGATGTCGCAAGCAGCATCAAGTATCATTTTGACCTCACCACAGGAGGTTACCGGGCACTTGTGTTCAGTGGTGACCATGATCTCATATTGCCATTTCTGAGCACCCAGGCATGGATAAGATCCTTGAACTTCTCCATAGTTGATGAGTGGAGAGCATGGCATGTGGATGGCCAGGCTGCAGGATTTACAATTTTGTACGCCAACAACTTGACCTTTGCCACAGTAAAGGGTGGTGGCCATACCTCTATAGAAACCAATCCTAAACAAGGTTTTGCCATGGGCAAACGTTGGCTAGATAATAAGCCTCTGTGA More
Protein seq	MVLELLTMAAHRVGRCMLLQPPRLATCVLFLLLPLLLPCSASSSVITHLPGFHGRLPFHLETGSPSTGPVILWLTGGPGCSGFSGVVFEVGPMKYVLEPYNGSLPRLVYNQYSWTQMASILFLDTPVGSGFSYAHDPKGYNVGDISSSLQVVTFLKKWFNDHPRYLSNHFYVGGSSYAGKLQGYIVGNPITGSKIDDNFKIPYSHGVGIISDQLYEAAVANCNGDYVTTTNELCAKALNAIDNLMSEVDYGNILDDKCVRATPKPINEVSRSRSLLEDYIRLSEPTSYRYYLSFLWMNNNLTREALKIKKGTVGEWIRCKTGLPYVQDVASSIKYHFDLTTGGYRALVFSGDHDLILPFLSTQAWIRSLNFSIVDEWRAWHVDGQAAGFTILYANNLTFATVKGGGHTSIETNPKQGFAMGKRWLDNKPL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_03G032890	OsN22_03G032890_04	Chr03	32423244	32429599	+	IsoSeq
CDS seq	ATGCATGCTCCTGCAACCACCGCGCCTCGCCACCTGCGTCCTCTTCCTCCTGCTACCGCTGCTGCTGCCGTGCTCGGCGTCGTCGTCGGTGATCACCCACCTCCCGGGCTTCCACGGCCGCTTGCCGTTCCA
Protein seq	MHAPATTAPRHLRPLPPATAAAAVLGVVVGDHPPPGLPRPLAVP

Event Type	Chromosome	Start	End	Strand	Alternative mRNAs	Total mRNAs	Source
A3	Chr03	32423532	32425653	+	OsN22_03G032890_04	OsN22_03G032890_01,OsN22_03G032890_04,OsN22_03G032890_03,OsN22_03G032890_02	All
RI	Chr03	32429231	32429757	+	OsN22_03G032890_01	OsN22_03G032890_01,OsN22_03G032890_02	All
SE	Chr03	32428918	32429231	+	OsN22_03G032890_04,OsN22_03G032890_01,OsN22_03G032890_02	OsN22_03G032890_01,OsN22_03G032890_04,OsN22_03G032890_03,OsN22_03G032890_02	All
A5	Chr03	32428339	32428524	+	OsN22_03G032890_04	OsN22_03G032890_01,OsN22_03G032890_04,OsN22_03G032890_03,OsN22_03G032890_02	All

Expression

	Leaf	Root	Panicle
FPKM	0.000000	2.657251	5.664279

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_03g0730400	RBH	0.000000	0.135461	4.649220
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os03g52040	RBH	0.000000	0.110022	1.170091
Nipponbare \| IRGSP 1.0 \| RAP-db	Os03g0730400	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_03g0033460	RBH	0.0	26.226118	2.756449
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_03g0033160	RBH	0.061128	5.233663	2.898850
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_03g0033230	RBH	0.0	33.996284	5.481895
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_03g0033550	RBH	0.0	0.558627	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_03g0033160	RBH	4.530792	29.704414	38.734978
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_03G0509800	RBH	15.8599995	12.9050995	4.584564
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_03g0032910	RBH	0.000000	0.657357	1.215913
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_03G0510800	RBH	8.850739	7.067128	4.8354455
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_03g0033380	RBH	0.215740	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_03g0033380	RBH	0.000000	20.078350	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_03g0033160	RBH	0.618060	47.915791	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_03g0033100	RBH	0.642138	0.515224	0.785306
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_03g0033120	RBH	0.035713	4.295040	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_03G032900	RBH	0.0	0.0	0.391659
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_03g0032730	RBH	0.395599	36.973579	21.343933

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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