Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_02G001410 | OGI:02003970 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr02:963784-963990 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGCACTATAGGAGACCTGGAGCTGGAAGCGAGGGCCCTTTGAGCTCTTGCACCATGATAAAGAAGCTCGAGAAAGTGAAGACAGCAAAAAGATCCGTTGTCCACGATGCTGCCTTGAACCACCTGGAGTACATAAGAGGTTCCACCAGGTACCCTCTGGAGCGAAATGCTGGGGGCGGTTACTTCTGCATGATCAACGACAGATAG |
||||||||||
CDS seq | ATGCACTATAGGAGACCTGGAGCTGGAAGCGAGGGCCCTTTGAGCTCTTGCACCATGATAAAGAAGCTCGAGAAAGTGAAGACAGCAAAAAGATCCGTTGTCCACGATGCTGCCTTGAACCACCTGGAGTACATAAGAGGTTCCACCAGGTACCCTCTGGAGCGAAATGCTGGGGGCGGTTACTTCTGCATGATCAACGACAGATAG |
||||||||||
Protein seq | MHYRRPGAGSEGPLSSCTMIKKLEKVKTAKRSVVHDAALNHLEYIRGSTRYPLERNAGGGYFCMINDR |
||||||||||
Function | Sialyltransferase-like protein 4 [UniProtKB/Swiss-Prot:Q6ZH45] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_02G001410 | OsN22_02G001410_01 | Chr02 | 963784 | 963990 | + | NAM | ||
CDS seq | ATGCACTATAGGAGACCTGGAGCTGGAAGCGAGGGCCCTTTGAGCTCTTGCACCATGATAAAGAAGCTCGAGAAAGTGAAGACAGCAAAAAGATCCGTTGTCCACGATGCTGCCTTGAACCACCTGGAGTACATAAGAGGTTCCACCAGGTACCCTCTGGAGCGAAATGCTGGGGGCGGTTACTTCTGCATGATCAACGACAGATAG
More
|
|||||||
Protein seq | MHYRRPGAGSEGPLSSCTMIKKLEKVKTAKRSVVHDAALNHLEYIRGSTRYPLERNAGGGYFCMINDR |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0119000 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g02620 | SBH | 0.173884 | 0.0 | 0.508225 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0119000 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0001390 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0001450 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0001400 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0001380 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0001410 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0016200 | RBH | 1.134152 | 3.6844715 | 3.4322085 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0001370 | SBH | 0.000000 | 0.0 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0016700 | RBH | 0.8110225 | 2.084876 | 5.635476 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0001380 | RBH | 0.0 | 0.000000 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0001330 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0001390 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0001450 | SBH | 0.0 | 0.000000 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0001440 | RBH | 0.000000 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G001350 | RBH | 0.000000 | 3.871090 | 2.249253 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0001380 | RBH | 0.623385 | 20.424784 | 0.0 |