Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_01G001230 OGI:01002250 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr01:859469-864658
Gene Symbol RLCK11, OsRLCK11
DNA seq

ACGGCCTTCTCTTCCTCTGCCTTCCTCGCCATTACACTCCATGGACTTGCCAAAGCTTCTCTTCACAGTAGTACTACTCTCTTCTCAACTACGAATCTTATGTCGCTGCAGCATTGGAGGATGATGAAGATTTCTTCGAGACCTGTTCATCACAGAGGTGCAGCAAGCATGGACCAGAGATCAGGTTCCCTTTCCGACTCTCAACACAACCTTCATCATGCGGCGCACCCGGCATGCACTTGTCATGCTCTGGACAGGACACCATCCTCAATCACCCAGTTCTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCATGAACGTCATCCCACCTGTAGATTCCTCACCTCCCTGCCCACTTCTGAAGCTCATGTCGAAAAACCAATCAACTTCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGTAGTTTGTTCAAGAGATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTGCCTCGGCCATAATAACCAGTTCTGGTATTTGGCAGATCCCTATACATACATGTCTGTTCTTCCCTTGGACTGCACAGTTATTTCTAAAGGCATCCCAATGCCCTATAGTTATGATAAAAAAGGGAGAATAAACTGGGACACCTCAAACTTCAAGGAAACAGCAAATAGAGTCATCAACGATGGTGAGACAGTATTCACGTGGTACTCTAGTAACATTACTAGTATTTGCCAACAATGTGAAGATGAAGGCCGACCCTGTGGTTTCAGTTCACAAAGTGGTCAAGCATTCTGTCGTCATCATGGTATTTTTTTTCTCTCTTTTTGAAGCACAAACCCCATATCATTATGGTGACTTGTTTCATTTTCGAATAGCATTCAATATTTTTTTTTCCAATTCTCAGTACGTTAGTTATCCAATCTTCTATATTCTAATACAGTGATTTCAAGCTCGATGCAATATTTTCACCTTGCAATCAAACAGTTTACCAAAAGTGAAGGTGTACTGTGAATCACTTGATTGCTAGCTTGGATGAACATTTTAACTCTAGGTTCACATCCGTAAATGTTCTAATAGAAGCCCTGCAAAGAGATGAGTGTCTAAAATTCTAATAGAAAATGTTAATCCAGGCTTTATTTGCACAGTGTCTTTGTTAAAGTCTAGGTTGGTAGATCGGGAAGATGATCTCACAATTATTTAGGTTTAAGCTAGCTTTGATCCGAATAACAGGTTATTAATAATTAAATAATAATTTTCCCTTTTTCTTTCGCTTCAAACCAAAGTAACTGTTCAAAATAGTGCTTTGTTGTACACAGATTACGGTGCACTAATGAAAATTCACAAACTGTACAACGTTACATAGAAGTATTAGCATTCATAAATGTTTATCTATACTAATATAAAAGATGGTAGTGGTGGTGGTGAGCCTGCCACCACCACCAGCCAACTACCATGCGGGACCCACGAAATATGAGATAAAACTTTGATTGTTTCGTAACCCTCACATGCCATAGACCCCGTCGAAAGGAAAATATGACAATAGAATATTATGGAATTTTTCATCTTTGCGAAATGGCAGCAAAATTAGCACAATAATAATATATTAGACAATTAGAAAAAACCCGTTGCAATGCACGGACATTATGCTAGCATGATATAACACTGTTCTCTGTATTTCAGCAAAAACAAAAAAAAGAAAAGAAAAACATATGTACAATCCATTTGATGGACCTGAATTTATGTGACAACTCCAATAACTTATAAGACAAGTTGAAAGTTAATATTACTACAGTAGGAAACAATAATGTACCAGTATCATATAGACTAGGGTTAATTTGATCTATGCCACTGTAAATATGGCAAATTAAAAATATACCACTACTATTCACGTTATCTAGTGGGTGCCACTGTAAATTTATAAAATTGGAGCCATGCCACTCTGTCACTATTTCCGTTCTCTCCATCCACTCTCCGTGACGACGTGAGGCCACTCGGTGACGACGTCCGGACGTCGTGGTCGTCGTCGACGGCGGGCACGGCATCACCGGCGAGACCCCGACGAGCCGCTGCGCTGCGAAGTCCTGGATCTGCGCCGGCGCCACGCTGGCTGCAACTCCGCGCATACCGCATCAGGTCGGGGAACGGCGCCGCCACGGAGGACGCCGACGCCGGGCCATGCTGCGGCGGACGGGGCACGGCGGGGAGCGGCGGCATGCGGAGGGAGGGAACGGTGGATGCCGCGCTTGGAGGGAAGGAGATGCGGCGGCAGCGCGCGGAGGGGATCGAGCGAGTTGCGGCCGACCGGGTGGAGGGATCTGCGGCGGCGCGCGGATCGGGAGAACGGCGGCCGCCACATGTGGAGGGAGGGAGATGAAGCAGCAGCGCGCAGAGGGGGAGGCAGCGAACGGCGGCGGTACGTGGTTGTTGCGCTCCTCGTTTTCATCCTCTTCCTCCTCAGCTTCTTCCTTCCTCCCGGCATGAAGCTCACCACTGCGCTGCTCGGCGTGCGCTCCTGGACCCGAGCGCTCGCGCTGCAGAGGCTACAGCCAAGGGCGACGATGCTGCGATGATGACAAGCAGTGCACTGCTTCCGCATGTCGTGACTTTGTGATTTGATCCATGCATTTGAATGTTGCTGTTGCGTGTTGCTTTCGTTTGCAATTAGTCCACGATCTCCTGATAGAGAATTTCTATGTGCAAACTACCGTGGCGTGCGGCGGCGCCTGTGAGTCCACACGCTCGATGCGGAGCTCGGCGACGAGGCATAGGTCGTGGTCGGCAAGCACGATGGCGGCGGTGTCGGTGGCGTCAGGGTCGGCAGCGTCATCCGGGGCGGCGGAGGAGGAGGACAGGGAGAGGAGGGGGGAAGACGGAAAGATTGACGGAAAAGATGGAAAGAGTGACGGAGTGGCATGGCTTCAATTTTAGAAATTAACAGTGGCATCCACCAGATAACGTGAATAGTAGTGGCATATTTTTGATTTGCCATATTTGCAGTGGCATGGATCAAATTAACCCTATAGACTATGACTCTATGAGCAGAGAGATTATATGGTGCGAACAGAGTAGAGAGATGCACTTGATAATGCAGTGATAAGGGGTATGTGGTTTCAACCCCGAGGTCCCGTGTTCAATCCCCAGTATGCTCACAATTTCTTCTTAAAAATTTTTTGGAGGGACGTCTCTCCCTCCAAATCTCCTTTTTTTTTGTGCTAACAGAGTAGAATCCAGAACATGCTTTGCAGACTGCAGTGATCTGTGAGATCATTATATTAGATATTTCCGTCCTTCTAAATAATTTAAACTAAAGCATTTCTCTTTTTATGGTTGGTTAAGATAAGAATCCTCCCTCCCATCCTATTCCCTTTTATGACTACTAGCTAAATCCCCGTGCTTTGCTACGGATAAAAGGAAAAATATAACAATATTTTATAACATAAATAAATCATATTTTCCATGAAATATGTTATCCACATTTCCCCTATAGGAAAATGTGGGCTATCCATTATGTAATATTAAAACGTTCAAAGGGTAATATGTAAAACTTGTAATAGGAGTAGGTGGGGTGGCAAATTCACTGCCACCACCATTGGAATCTTTTTAAAGAAGTATAGATACCCATGCAAGTTTTAAAATTCTATACAGCAAGCCATATAAAAATATGGAATCAGTTTTATTTTTATTTTAAAAAAACATCCTTTTTATATACAAATCAAGGGAATACTAATTCTCTTTCTTTCTACATGCAGGACTGCGGGTCACTCTTGTTGCAGGTAAGGAAATAACTCAATCTTTTGTCCATTCTGCATGAAATTTCAATTAAATGCCACCCAATTTATAAACTTTCAACAAAGAGAGTGTATATATTTTCTAATCCAAATAAGAAATGCCATGATTATCTTGACAATAAAGGCACATGTGGAAAATAAATTACAGAATTATGTCATCTCCAAATGCAGCTAACTAACTTTCTTATTTTTCAATCAGCTACATCATCTGTAGCCACATTTGTAATTCTTTCATTAGTTGTGGCCACTGCATTCTACATCTCCTTAAAGTCAAGGTACAACAAAGAGATACATTTGAAAGTTGAAATGTTTCTCAAGACATATGGCACATCCAAGCCCATGAGGTACACTTTCTCCGATGTTAAGAAAATAACGAGACGGTTCAAGAATAAATTAGGCCATGGTGGATTTGGAAGTGTCTACAAAGGTGAGCTACCAAATGGAGTTCCTGTGGCAGTCAAGATGCTAGAGAACTCCTTAGGAGAGGGAGAAGAGTTCATCAATGAAGTTGCAACCATTGGGAGAATTCACCATGCAAGCATCGTCCGTCTCCTAGGATTTTGCTCTGAAGGAACACGACGGGCTTTAATATATGAATTCATGCCCAATGAATCGTTGGAGAAATATATATTCTCAAATGGTTCTAATATTTCAAGAGAATTCCTAGTACCAGAGAAAATGTTAGATATTGCTTTAGGCGTCGCCCGAGGAATGGAGTACTTGCACCAAGGGTGCAATCAGCACATTCTCCATTTTGACATCAAGCCTCACAACATATCGTTGGACTACAGCTTCAGTCCAAAGATCTCAGACTTTGGGCTTGCAAAGTTGTGCGCAAGAGATCAAAGCATTGTCACATTAACTGCAGCAAGGGGCACGATGGGCTATATTGCACCAGAACTATATTCTCGGAGTTTTGGAGCAATATCATACAAGTCGGATGTCTACAGTTTCGGCATGCTGGTGTTAGAAATGGTGAGTGGGAGGAGGAACACAGACCCAACCATTGAGAACCAAAATGAGTTCTACTTTCCTGAGTGGATATATGAGAGAGTAATCAATGGGCAGGATCTGGTGCTTAACATGGAGACAACACAAGGGGAGAAAGAAACGGTTAGACAGCTAGCCATTGTAGCGTTATGGTGCATTCAGTGGAACCCAAGAAACCGGCCCTCGATGACAAAGGTAGTAAACATGTTAACGGGGAGGTTGCAGAATCTACAGGTGCCGCCTAAGCCCTTCATTTCGTCTGAAAATCATCTTGCGACTTAGATCATGGAAACACAATTCCATGGTTTGGAGATATGTTTGATCGATCCATAGCTTGTATGTATGGTGTAAGATTATTCAACTATATTGTGCTATCGGACATATGGTATATGTATTCATGCAATTCT

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CDS seq

ATGCACTTGTCATGCTCTGGACAGGACACCATCCTCAATCACCCAGTTCTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCATGAACGTCATCCCACCTGTAGATTCCTCACCTCCCTGCCCACTTCTGAAGCTCATGTCGAAAAACCAATCAACTTCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGTAGTTTGTTCAAGAGATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTGCCTCGGCCATAATAACCAGTTCTGGTATTTGGCAGATCCCTATACATACATGTCTGTTCTTCCCTTGGACTGCACAGTTATTTCTAAAGGCATCCCAATGCCCTATAGTTATGATAAAAAAGGGAGAATAAACTGGGACACCTCAAACTTCAAGGAAACAGCAAATAGAGTCATCAACGATGGTGAGACAGTATTCACGTGGTACTCTAGTAACATTACTAGTATTTGCCAACAATGTGAAGATGAAGGCCGACCCTGTGGTTTCAGTTCACAAAGTGGTCAAGCATTCTGTCGTCATCATGGACTGCGGGTCACTCTTGTTGCAGCTACATCATCTGTAGCCACATTTGTAATTCTTTCATTAGTTGTGGCCACTGCATTCTACATCTCCTTAAAGTCAAGGTACAACAAAGAGATACATTTGAAAGTTGAAATGTTTCTCAAGACATATGGCACATCCAAGCCCATGAGGTACACTTTCTCCGATGTTAAGAAAATAACGAGACGGTTCAAGAATAAATTAGGCCATGGTGGATTTGGAAGTGTCTACAAAGGTGAGCTACCAAATGGAGTTCCTGTGGCAGTCAAGATGCTAGAGAACTCCTTAGGAGAGGGAGAAGAGTTCATCAATGAAGTTGCAACCATTGGGAGAATTCACCATGCAAGCATCGTCCGTCTCCTAGGATTTTGCTCTGAAGGAACACGACGGGCTTTAATATATGAATTCATGCCCAATGAATCGTTGGAGAAATATATATTCTCAAATGGTTCTAATATTTCAAGAGAATTCCTAGTACCAGAGAAAATGTTAGATATTGCTTTAGGCGTCGCCCGAGGAATGGAGTACTTGCACCAAGGGTGCAATCAGCACATTCTCCATTTTGACATCAAGCCTCACAACATATCGTTGGACTACAGCTTCAGTCCAAAGATCTCAGACTTTGGGCTTGCAAAGTTGTGCGCAAGAGATCAAAGCATTGTCACATTAACTGCAGCAAGGGGCACGATGGGCTATATTGCACCAGAACTATATTCTCGGAGTTTTGGAGCAATATCATACAAGTCGGATGTCTACAGTTTCGGCATGCTGGTGTTAGAAATGGTGAGTGGGAGGAGGAACACAGACCCAACCATTGAGAACCAAAATGAGTTCTACTTTCCTGAGTGGATATATGAGAGAGTAATCAATGGGCAGGATCTGGTGCTTAACATGGAGACAACACAAGGGGAGAAAGAAACGGTTAGACAGCTAGCCATTGTAGCGTTATGGTGCATTCAGTGGAACCCAAGAAACCGGCCCTCGATGACAAAGGTAGTAAACATGTTAACGGGGAGGTTGCAGAATCTACAGGTGCCGCCTAAGCCCTTCATTTCGTCTGAAAATCATCTTGCGACTTAG

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Protein seq

MHLSCSGQDTILNHPVLGPCKVTEISYSYATMNVIPPVDSSPPCPLLKLMSKNQSTSVYKPQGPQSQGATLVVCSRDPIPANQYDIVGPISCLGHNNQFWYLADPYTYMSVLPLDCTVISKGIPMPYSYDKKGRINWDTSNFKETANRVINDGETVFTWYSSNITSICQQCEDEGRPCGFSSQSGQAFCRHHGLRVTLVAATSSVATFVILSLVVATAFYISLKSRYNKEIHLKVEMFLKTYGTSKPMRYTFSDVKKITRRFKNKLGHGGFGSVYKGELPNGVPVAVKMLENSLGEGEEFINEVATIGRIHHASIVRLLGFCSEGTRRALIYEFMPNESLEKYIFSNGSNISREFLVPEKMLDIALGVARGMEYLHQGCNQHILHFDIKPHNISLDYSFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRSFGAISYKSDVYSFGMLVLEMVSGRRNTDPTIENQNEFYFPEWIYERVINGQDLVLNMETTQGEKETVRQLAIVALWCIQWNPRNRPSMTKVVNMLTGRLQNLQVPPKPFISSENHLAT

Function Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_01G001230 OsN22_01G001230_01 Chr01 859496 864658 + NAM
CDS seq

ATGCACTTGTCATGCTCTGGACAGGACACCATCCTCAATCACCCAGTTCTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCATGAACGTCATCCCACCTGTAGATTCCTCACCTCCCTGCCCACTTCTGAAGCTCATGTCGAAAAACCAATCAACTTCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGTAGTTTGTTCAAGAGATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTGCCTCGGCCATAATAACCAGTTCTGGTATTTGGCAGATCCCTATACATACATGTCTGTTCTTCCCTTGGACTGCACAGTTATTTCTAAAGGCATCCCAATGCCCTATAGTTATGATAAAAAAGGGAGAATAAACTGGGACACCTCAAACTTCAAGGAAACAGCAAATAGAGTCATCAACGATGGTGAGACAGTATTCACGTGGTACTCTAGTAACATTACTAGTATTTGCCAACAATGTGAAGATGAAGGCCGACCCTGTGGTTTCAGTTCACAAAGTGGTCAAGCATTCTGTCGTCATCATGGACTGCGGGTCACTCTTGTTGCAGCTACATCATCTGTAGCCACATTTGTAATTCTTTCATTAGTTGTGGCCACTGCATTCTACATCTCCTTAAAGTCAAGGTACAACAAAGAGATACATTTGAAAGTTGAAATGTTTCTCAAGACATATGGCACATCCAAGCCCATGAGGTACACTTTCTCCGATGTTAAGAAAATAACGAGACGGTTCAAGAATAAATTAGGCCATGGTGGATTTGGAAGTGTCTACAAAGGTGAGCTACCAAATGGAGTTCCTGTGGCAGTCAAGATGCTAGAGAACTCCTTAGGAGAGGGAGAAGAGTTCATCAATGAAGTTGCAACCATTGGGAGAATTCACCATGCAAGCATCGTCCGTCTCCTAGGATTTTGCTCTGAAGGAACACGACGGGCTTTAATATATGAATTCATGCCCAATGAATCGTTGGAGAAATATATATTCTCAAATGGTTCTAATATTTCAAGAGAATTCCTAGTACCAGAGAAAATGTTAGATATTGCTTTAGGCGTCGCCCGAGGAATGGAGTACTTGCACCAAGGGTGCAATCAGCACATTCTCCATTTTGACATCAAGCCTCACAACATATCGTTGGACTACAGCTTCAGTCCAAAGATCTCAGACTTTGGGCTTGCAAAGTTGTGCGCAAGAGATCAAAGCATTGTCACATTAACTGCAGCAAGGGGCACGATGGGCTATATTGCACCAGAACTATATTCTCGGAGTTTTGGAGCAATATCATACAAGTCGGATGTCTACAGTTTCGGCATGCTGGTGTTAGAAATGGTGAGTGGGAGGAGGAACACAGACCCAACCATTGAGAACCAAAATGAGTTCTACTTTCCTGAGTGGATATATGAGAGAGTAATCAATGGGCAGGATCTGGTGCTTAACATGGAGACAACACAAGGGGAGAAAGAAACGGTTAGACAGCTAGCCATTGTAGCGTTATGGTGCATTCAGTGGAACCCAAGAAACCGGCCCTCGATGACAAAGGTAGTAAACATGTTAACGGGGAGGTTGCAGAATCTACAGGTGCCGCCTAAGCCCTTCATTTCGTCTGAAAATCATCTTGCGACTTAG

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Protein seq

MHLSCSGQDTILNHPVLGPCKVTEISYSYATMNVIPPVDSSPPCPLLKLMSKNQSTSVYKPQGPQSQGATLVVCSRDPIPANQYDIVGPISCLGHNNQFWYLADPYTYMSVLPLDCTVISKGIPMPYSYDKKGRINWDTSNFKETANRVINDGETVFTWYSSNITSICQQCEDEGRPCGFSSQSGQAFCRHHGLRVTLVAATSSVATFVILSLVVATAFYISLKSRYNKEIHLKVEMFLKTYGTSKPMRYTFSDVKKITRRFKNKLGHGGFGSVYKGELPNGVPVAVKMLENSLGEGEEFINEVATIGRIHHASIVRLLGFCSEGTRRALIYEFMPNESLEKYIFSNGSNISREFLVPEKMLDIALGVARGMEYLHQGCNQHILHFDIKPHNISLDYSFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRSFGAISYKSDVYSFGMLVLEMVSGRRNTDPTIENQNEFYFPEWIYERVINGQDLVLNMETTQGEKETVRQLAIVALWCIQWNPRNRPSMTKVVNMLTGRLQNLQVPPKPFISSENHLAT

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Gene Transcript Chromosome Start End Strand Source
OsN22_01G001230 OsN22_01G001230_02 Chr01 859469 861154 + IsoSeq
CDS seq

ATGCGGCGCACCCGGCATGCACTTGTCATGCTCTGGACAGGACACCATCCTCAATCACCCAGTTCTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCATGAACGTCATCCCACCTGTAGATTCCTCACCTCCCTGCCCACTTCTGAAGCTCATGTCGAAAAACCAATCAACTTCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGTAGTTTGTTCAAGAGATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTGCCTCGG

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Protein seq

MRRTRHALVMLWTGHHPQSPSSWSLQSNRDKLQLCYHERHPTCRFLTSLPTSEAHVEKPINFCVQTSRSSIAGSYPCSLFKRSHTCKSIRHSWPNILPR

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.122705 0.000000 0.105232

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0115600 RBH 0.620285 0.249876 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g02560 RBH 0.408265 0.163573 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0115600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0001110 RBH 1.344002 0.000000 1.964355
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0001080 SBH 0.069754 0.307502 0.332710
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0001190 RBH 1.017128 0.0 0.722750
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0001070 RBH 0.848388 0.084800 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0001220 RBH 9.139219 1.654570 2.717247
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0013000 RBH 7.4692735 0.38559 0.6560215
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0001120 RBH 0.297357 0.000000 0.058272
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0015200 SBH 1.617323 0.890693 1.779883
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0001170 SBH 0.907174 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0001230 RBH 0.000000 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0001140 RBH 8.721477 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0001290 SBH 1.755259 0.526992 0.360528
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0001140 RBH 0.057369 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G001390 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0001130 RBH 0.898583 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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