Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0001170 | OGI:01002250 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:832810-843239 | ||||||||
| Gene Symbol | RLCK9, OsRLCK9, RLCK17, OsRLCK17 | ||||||||||
| DNA seq | atggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatgggatgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactcagccttgtgtcacaatctccgtcatgtggcacacctctcatggagttatcatgttctggacaggacaccattctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccactccagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttagtaagttgttcaagagatttaccaagagatcagcacggtgtagttggcccaataacttgcctcagtaacaacacaagccagtggcatttgatacatccttatgcatccatgtctgttcttcagtcagactgcaaagttgttagtaaaggcatccaggcaccctcaacttttaaggaaacagaaaatggagtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcactctgctattatggtattttctctttctgaagcagaaatgttacatcaatattatgacttgctttgccttggtagggaactctatggtctttaccttttcattctcttagtttatagtttgctaattaaattgttcaaaagatttccatagttgaattagttgtaaacactgcagatcagagcagctgctagccagaggaagcataccaaagctctaggttcacatgtatggttattctaatttaaaatgcgcgcacgcacacaagagaaggttataaccaattaagactaacgtaattttttttgaaattcttaaaattaaaaaaaaataccattcatctacaaggattggagcataggcctcccttagtaaccaaagagggtgctatgaatgaatacactctccaaaataccattgttagtatcaacatatagtttatttgattgtaaccatttggactggaccacctatagatgttctgtcatgttccaagttaaagaaaaaaagaaagaagaaaacataatttacttagcaacaactgctaagtctcgcattggttccatgcattccagccatagaaaccagatccgcattccttaatgtcaatactatactctctactctagcttatcactagaaccaaggatggacattggttaaagggtggtccaaagtgaaacatcggtaataaaatgttgcccaaagtgaaatttacccctttttttttaccagtagtatatccatttttcgaaaccagaaagaaccatatactgttataactgagatcacgtatgcatgaacctaacaggaatgcatatctattttccagacaagttaggatccttttcggaaaagaatattttttgaatttatacatatatagctctttgttctatgttgtccttcacctgttaagcttcctagtaggatggaactcctacagaaagtgtttttctagcaaagtcttatggattgttgtcctatagaattcaacagacatggcaccatattcctacatttatctattcctgtggtttttaattagtataccatgttccaaaaaaaggcccttaaaagaacgtttctggatttttttttttTAaaaaaaacatgttactttatatttgaggtccattgtaaattaagatggcaggaacaatgtcatttcataaccaggtccatttctaattctgctctttcttaattgcaggttcaaatgtcataatcatcataggtaatactatgattaaatatttctattatgcatataaaattctagttgctatcaaattcttgtatctgcttataccaataagatggattatgtgatttgtttttgtctggatgcagcttgacaagttcttttttgttttctagcagcgtcatctgcagccatcattatagttcttttgcttatagtgcccattgcactctgtcttttcctgaagtcgcagtataacgaagaggtacatttgaaggttgaaatgttcttgaaaacatatggaacatcaaaacccaaaagatatactttttctgaagttaggaagatttcaagacggttcaaacataagttaggccagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgaattcatcaatgaagttgcaaccattgggacaatccaccatgccaatgtgctccgccttttgggtttttgttcagaaggaacaagacgtgctttaatttatgaattcatgcctaatgactcattggagaaatatatattctcacaaggtcctaatgtgtcaagggactacctagtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaatggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaatatattactagattacagatttaacccaaagattgcagattttgggcttgcaaagctgtgtgcaagggatcAaagcATtgtcacgttgactgcagcaagaggcacaatgggctacattgcaccagaattatattctcggaactttggagccatatcatacaagtcagatgttTAtagtttcggcatactggttttagaaatggtgagtggaagaaggaacttggaCccaagtattgagacccaacatgaggtttaTttccccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgacacaggtagaaaaaaatagagtgagacaactggcaattgtggcactatggtgcattcaatggaacccgagaaacaggccttcaacgacccaggtggttaacatgctaacaggaaggttgcaggatctgcagatgcctcctaaaccatttttctcatctgcaagcgaatctataccctaaaaaaaaaatgaagatatcaccacggttggcacatgtttgaaagatagcctacgtattgctcagtgatcctgagtactacctccttccctaaatatttgacgccgttgcttttttaaatatgtttgaccgttcgtcttatttaaaaacttttgtgaaatatgtaaaactatatgtatacataaaaatatatttaacaatgaatcaaatggtaggaaaagaattaataattgcttaattttttttaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtcaaatatttagggatggagggagtactagctagcatgtaccttacttgtaaaatgaatagcacatacagaattgtgctcaaagacaaggacttgataattaccttattctgtgttctgtaatagccttgatttatctttatcattcatattatgtagcctcaaacactggaccccttgcaggctgtacaatgcgattgagaattcctttgcatttcattcagtgcatcaataccaggtgggatcgcataatagaagcctgtaaggcaggtgattagctatggcatgttgttccttatttgctactacaatcctaaatcgaaatcgaatctacagatgcgcatgggtctgagtttgctactacaaccctaaactgaatctatagaatcaaaagcaaagcaaaggaattactaccttcatcgatgcccaggagagggggacagcggggcgggcagtctcaacccggctgcgcaGCgccagcatccgatcaattctgcgacctctcgagactctagcggctcaaatccgatggcgagcatggcggtatagcgctccagtggtacgcactggcggcggagcgcggagagtgcctccgacgctctaccgggttggggggaagtagccggtggacggcgagcaGggttccgaatgggctcgtttgtaaaacatggcccaactaccgctgaatctaattgggctgggactcggggtacaggccggagcccacgaaagaagagcatatgaaatacaaaattagttttattaaatttaacattgaacatattttgataatatgtttattttatgttgaaaatgctagtatatttttttataaagttggtcaaacttaaaagtttgactaggataaaaataaaagcaacttataaggacaagttcactgtacttctttgcatgataatactaagtgcataaaactacagatacatgggcctccgcgtaatgacgctagcgtacacagaaaaatacaatcatcacatatataagcatgcttcagcaatcagcatttcgcaacgtgcatgctactagtactaagttactggtagctaaagctctgaaacaggctaatgctttcgtcgtcatcgtcctcttcagcttcagagattgcagtcagatcagatgacagatggtaaggctctactccaaggggttgctcatcatcacagaagaatggcttgggaggaacttggagatcatcgctgccaccttcaagcatctctatcacctcgctcatcgttggtcgatcagatgacctcatctgaatgcaccataatccaacaacgcaaagcttcttctccagctcatgcatgtcgacaatgtcagagatctcacacgtttctcgtcgagtcaactgcttgtacacccgggatggatagtatgcctgacttgagtttgctgcattcggatctgcatttcttcttcctccggccatttctagtagcagcatcccgaagctgtaaacatcagatttgcttgatatggtaccaaagctccgagagatcatctcaggagctatgtaacctatcgttcctcgtgcggcactcactggcacaaagctcttgtcccttgggtacagcttggcgagaccgaaatctgcaacttttgggacaaagttatcatcaagaagaatgttatgcggcttgatgtcaaagtgtagaatttgcatctcacacccctgatgcaggtagttgatccctcttgcaatacccaaggcgatctcattcagcttgtcccaggagaaactcttctctaccgagaagatgtacttgtcaagagagcctcgaggcatgtacccgtatacaagtgccctcctcatttcttctgagcaaaacccgatcagacgcaccacattgacatggtggatccttccaatggttgagacctcactgatgaactcatctccgttacagctggagctaccagtcagcatcttgacagcgatatggacattgcccgggagcaatacacctttgtatacagagccatagcttccttggcccagcttatctcgaaaatgggatgtgatcgcaatgatgtcagtgtaggcgtacctcgtcggaccaatcatctgttgcatccggaggaacttctctaccgcgtcgatcgtgatccttgttttccagtacttgtgggcaaggaagatgaataccaccagcggcaccaacagtaacctgcatagaactttgcagacatgccaagaacccaagaagcagggTtttttagatagtgacaaagtacaggacaatatcactcaaaaagaacattgcagctataatgattaagtgaaggtaattcaagcataccaaaatggagcttgatgatagcaatgacagatactatgataaccacgaatgacattaactttgttgtgtagacgtgatcagtagctctgcaacttgcgaaatgtatatcgctccagaaaatagcacgggttatattccgaatgcttgcaccagatatatgatctttgaagtacctgcagatcacacaattgtaaaggacgggttatgcgaaggggaacatatctttctatgtaaagagaattacgaggagaaaagcaaccaagtcggtagcaaatggagccacgagatgattttggggcaagacacatttgagagcagagcagactcactcacctcattgaatcgttgaggcattgcgtagtgcttatacccctctggccacggataatctcaaatgaaaatctaacacgaaatcccttccttaaaaatcctacgagatctgtgtaacttgcattctctagctgagagtagtcctgaccatcaaattcaaagggaatcatgcccaagtatcgacaagagggttgaagctctccaactgcacaactgtggaacctgttgaggtaaaagaaggaattgttggcaggcaggcaagcgaggggcctgtaccgtggcatattagcatctgctattattggtttggaacaattcacaaagcatgcccaaatactgcctgaatcagtatccaaatcgacaaaagaatcattggatatctcccacctaggcctaggccagtcaatgttaggagggtgaagatcagcggcaggaagagggcagttgctgctgtttgaatcatcttgcagggtggcgtcgatggccaagaaggactgatcggtgtagtctatgctgctaacgtagtatgttcttgtgttgatctgaatggtggccttgccattgttacagggcaggtcataccatggacgagggccgataccacagtcgcgagtgtcgccttgaagacggaaagggtaggatatgttgtgaaggtgaccgcgggagaaaggaggacagtagtgcaggttgttgtcttgccctcctccaacatcagctgcaacaactccaagcaaataagtgatcagtagtagagctttctgcagggtgtaggtaatactactactaatggagctcgccatggctgcagcttcccggatgaatggctttggttctctgcttatggagttggctgcaaatgctgatggctgtcacagcaaccatgctgtgttatgcaaacgaacttctttttgcctatatcttaacaattgactaattgcaaatgctggcgtccttccgccggcccagcgaaataaacaaaacaaaaagcttaggctgctgattaacgtatacttacctaatacttttgggtggctagcttccacgctttccgcctgcaggatggtcagcagttgacggacctgcaagacgatggtcagcagttgacgccttgacggactgcagtacgtagcctagcgctttgtactatttgaacaagccatggagacacaccacaaggaacctttaaaagaataaaaattcatggaggcatggggcacatacggcagtcaagtcaaattgtcaaagttggaggactgccagccggccaggcacagacacgcatatgatttttaggagtatatagtatttccgttgctcttcttcatgtccatgaggaccatgacagaaatgaatactggtcgagttaagatgagctctggacatgctcttgcggcagccctgttgctgtttcttcttggagctcagttgaagaaggtcacagcgtgggaagacaaggatttcttcagctactgcccgccgtcgaggtgcagcgagcatggccccgagatcaggttccctttccaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaagataccatcctagataacaaatactaccttggaaggccatacaaggtgaccgccatagattacaagcatgctctcctgaccgccgtcccgctcgcagacgaagacaactactcctcaccgtctccctgcccgcttctaaaatccatatctatcaggccaaacttaatgacaggctatggttattgcaatttgggacggtaccagaacccttgccaaacatacgatacctactgtgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaacccacttctcctatttggtggcttatcatgtaactatgtctcttcttccactggactgcgaggtcgtctcagatggcttcattccgataccagtttttcattaCcccggttatacctggaccaaattcagaggaagtgcagaaagaatcctcaatttctctgagaccacgttctggtggaatttctacgattgcctacagtgtgaacaacagggaggacgttgcgcattcagctcgcaaaggaatcaaacattctgcatacgtcgaggtattctcctaaacccctatacaacaggcagtaccatccccgtttatcttctgtacagtaagttttataatttacatCcccacacaaatccatgcatggtaatactattcgatcatcttataaactgaaagcaggaaatggaaataaccttgatatgctagcaaatgcatgtctgcacctggataaaatttctcaagaaacagagcttatttggtcacagctgtagcatcctgattgcttctagcagcagacaagtagttctcagatgtgatgaaacttgagggtatacaagtatgatacaacgagagctgaagttagttgctgcttggttactttgatgggtgtcaaggttaacatagatctgagatgtgataatagataatattgtcaccctttatccacattatccaaccctaacaattctcaatctgccatacctcttgcttagtcaccatagttagcacatgccaatttgcttctcatgataccaggctatcagctgaacaaaatgtagggatcatttctagtttagaaataaattcatagataatccaagcttagctggtgccacacaatctaaaacttaagcacatacccatgtcagatttcaacttttctttgtcaagtcaatttctccttttattaataagactatcgatcaagtctaaatTCtcttgtttggtatttgcaggttcacatgtcaaagtaattgcaggtactggttcaataattcaaaccttctttcattcaaatgaaaataaaagaaaaagaaacaaagttacctgttgcatactttaagtcttatttttaggtaatctgatcttatattctcttatccccattaaaatccctaagtggtggctttctaatttctattcgtaataaatgtgttgatagtctgttcgttcttctgtttttatggaaagatggtcttcccagaatattccactaaacatctgctgttctgagctaagacttataaataaaagttgggctataagccttctttctagaaacaacacaatgccctgatttttattctctgcataatcagctacatcatcggttgccgcatttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaagatataacgaagagatacatctgaaggtcgaaatgtttctcaaaacgtatggcacatcgaaacccacgaggtacactttctccgaagtaaagaagatagcaagacggttcaaggctaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaatggagtccctgtggcggttaagatgctagaaaattccgaaggggagggaaatgaattcatcaatgaggttgcaactatagggagaatccaccatgcaaacattgtccgcctccttggcttttgctcagaaggaacaaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatatattttcacatgattctgatacttctcaagaagccctagtaccaagcaagatgctagatattgctataggcattgcccgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgacatcaagcctaacaacatcttgctggactataacttcagtccaaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcattgttaccttgactgcagcaagaggcacaatgggctatattgcaccagagctatattctcggaactttggagagatatcttacaagtcagatgtttatagtttcggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagccaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcgggatttagaacttggtagggaaatgtctgaagtagaaaaagcaacaatgaggcagctggccattgtggcactatggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagacttgcagaacatgctggcataa
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| CDS seq | atggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatgggatgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactcagccttgtgtcacaatctccgtcatgtggcacacctctcatggagttatcatgttctggacaggacaccattctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccactccagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttatcagactgcaaagttgttagtaaaggcatccaggcaccctcaacttttaaggaaacagaaaatggagtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcactctgctattatggttcaaatgtcataatcatcatagcgtcatctgcagccatcattatagttcttttgcttatagtgcccattgcactctgtcttttcctgaagtcgcagtataacgaagaggtacatttgaaggttgaaatgttcttgaaaacatatggaacatcaaaacccaaaagatatactttttctgaagttaggaagatttcaagacggttcaaacataagttaggccagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgaattcatcaatgaagttgcaaccattgggacaatccaccatgccaatgtgctccgccttttgggtttttgttcagaaggaacaagacgtgctttaatttatgaattcatgcctaatgactcattggagaaatatatattctcacaaggtcctaatgtgtcaagggactacctagtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaatggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaatatattactagattacagatttaacccaaagattgcagattttgggcttgcaaagctgtgtgcaagggatcAaagcATtgtcacgttgactgcagcaagaggcacaatgggctacattgcaccagaattatattctcggaactttggagccatatcatacaagtcagatgttTAtagtttcggcatactggttttagaaatggtgagtggaagaaggaacttggaCccaagtattgagacccaacatgaggtttaTttccccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgacacaggtagaaaaaaatagagtgagacaactggcaattgtggcactatggtgcattcaatggaacccgagaaacaggccttcaacgacccagttgaagaaggtcacagcgtgggaagacaaggatttcttcagctactgcccgccgtcgaggtgcagcgagcatggccccgagatcaggttccctttccaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaagataccatcctagataacaaatactaccttggaaggccatacaaggtgaccgccatagattacaagcatgctctcctgaccgccgtcccgctcgcagacgaagacaactactcctcaccgtctccctgcccgcttctaaaatccatatctatcaggccaaacttaatgacaggctatggttattgcaatttgggacggtaccagaacccttgccaaacatacgatacctactgtgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaacccacttctcctatttggtggcttatcatgtaactatgtctcttcttccactggactgcgaggtcgtctcagatggcttcattccgataccagtttttcattaCcccggttatacctggaccaaattcagaggaagtgcagaaagaatcctcaatttctctgagaccacgttctggtggaatttctacgattgcctacagtgtgaacaacagggaggacgttgcgcattcagctcgcaaaggaatcaaacattctgcatacgtcgaggttcacatgtcaaagtaattgcagctacatcatcggttgccgcatttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaagatataacgaagagatacatctgaaggtcgaaatgtttctcaaaacgtatggcacatcgaaacccacgaggtacactttctccgaagtaaagaagatagcaagacggttcaaggctaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaatggagtccctgtggcggttaagatgctagaaaattccgaaggggagggaaatgaattcatcaatgaggttgcaactatagggagaatccaccatgcaaacattgtccgcctccttggcttttgctcagaaggaacaaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatatattttcacatgattctgatacttctcaagaagccctagtaccaagcaagatgctagatattgctataggcattgcccgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgacatcaagcctaacaacatcttgctggactataacttcagtccaaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcattgttaccttgactgcagcaagaggcacaatgggctatattgcaccagagctatattctcggaactttggagagatatcttacaagtcagatgtttatagtttcggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagccaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcgggatttagaacttggtagggaaatgtctgaagtagaaaaagcaacaatgaggcagctggccattgtggcactatggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagacttgcagaacatgctggcataa
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| Protein seq | MAKLLVVVLLLSLLIYAATAWDAEGFFNFKSCPPHQCSKHGPKVRFPLSLVSQSPSCGTPLMELSCSGQDTILYHPVLGSCKVTAISYKHAAMTIIPLVDSTPHCPLQKLISTNLSTDVYKPQTLEAASLSDCKVVSKGIQAPSTFKETENGVIGVDELVFTWYSSDITRDCQKCENEGKHCGFSSQRGRALCYYGSNVIIIIASSAAIIIVLLLIVPIALCLFLKSQYNEEVHLKVEMFLKTYGTSKPKRYTFSEVRKISRRFKHKLGQGGFGSIYKGELPNGVPVAVKMLENSIGDGHEFINEVATIGTIHHANVLRLLGFCSEGTRRALIYEFMPNDSLEKYIFSQGPNVSRDYLVPEKMVDVALGIARGMEYLHQGCNQRILHFDIKPHNILLDYRFNPKIADFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGAISYKSDVYSFGILVLEMVSGRRNLDPSIETQHEVYFPEWIYEKVFTGQQLTVGMEMTQVEKNRVRQLAIVALWCIQWNPRNRPSTTQLKKVTAWEDKDFFSYCPPSRCSEHGPEIRFPFQLESKNTPSSCGVPCMKLSCSGQDTILDNKYYLGRPYKVTAIDYKHALLTAVPLADEDNYSSPSPCPLLKSISIRPNLMTGYGYCNLGRYQNPCQTYDTYCAALVSCSTEFALASVPGPATDNDYIAGPISCLSNQTHFSYLVAYHVTMSLLPLDCEVVSDGFIPIPVFHYPGYTWTKFRGSAERILNFSETTFWWNFYDCLQCEQQGGRCAFSSQRNQTFCIRRGSHVKVIAATSSVAAFVVLLLMVATALYLSLKTRYNEEIHLKVEMFLKTYGTSKPTRYTFSEVKKIARRFKAKVGQGGFGSVYRGELPNGVPVAVKMLENSEGEGNEFINEVATIGRIHHANIVRLLGFCSEGTRRALIYEYMPNDSLEKYIFSHDSDTSQEALVPSKMLDIAIGIARGMEYLHQGCNQRILHFDIKPNNILLDYNFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSVESQNVVYFPEWIYEQVTIGRDLELGREMSEVEKATMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQVPPKPFFSADSHPVLQDLQNMLA |
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| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0001170 | OsLima_01g0001170.01 | Chr01 | 832810 | 843239 | + | NAM | ||
| CDS seq | atggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatgggatgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactcagccttgtgtcacaatctccgtcatgtggcacacctctcatggagttatcatgttctggacaggacaccattctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccactccagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttatcagactgcaaagttgttagtaaaggcatccaggcaccctcaacttttaaggaaacagaaaatggagtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcactctgctattatggttcaaatgtcataatcatcatagcgtcatctgcagccatcattatagttcttttgcttatagtgcccattgcactctgtcttttcctgaagtcgcagtataacgaagaggtacatttgaaggttgaaatgttcttgaaaacatatggaacatcaaaacccaaaagatatactttttctgaagttaggaagatttcaagacggttcaaacataagttaggccagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgaattcatcaatgaagttgcaaccattgggacaatccaccatgccaatgtgctccgccttttgggtttttgttcagaaggaacaagacgtgctttaatttatgaattcatgcctaatgactcattggagaaatatatattctcacaaggtcctaatgtgtcaagggactacctagtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaatggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaatatattactagattacagatttaacccaaagattgcagattttgggcttgcaaagctgtgtgcaagggatcAaagcATtgtcacgttgactgcagcaagaggcacaatgggctacattgcaccagaattatattctcggaactttggagccatatcatacaagtcagatgttTAtagtttcggcatactggttttagaaatggtgagtggaagaaggaacttggaCccaagtattgagacccaacatgaggtttaTttccccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgacacaggtagaaaaaaatagagtgagacaactggcaattgtggcactatggtgcattcaatggaacccgagaaacaggccttcaacgacccagttgaagaaggtcacagcgtgggaagacaaggatttcttcagctactgcccgccgtcgaggtgcagcgagcatggccccgagatcaggttccctttccaacttgaatccaaaaatacaccatcgtcatgtggcgtgccatgcatgaagctatcatgctctggccaagataccatcctagataacaaatactaccttggaaggccatacaaggtgaccgccatagattacaagcatgctctcctgaccgccgtcccgctcgcagacgaagacaactactcctcaccgtctccctgcccgcttctaaaatccatatctatcaggccaaacttaatgacaggctatggttattgcaatttgggacggtaccagaacccttgccaaacatacgatacctactgtgcagcactagtaagctgttcaacagaatttgcactagctagtgtccctggccctgccaccgataacgattatattgctggccccatctcttgccttagcaaccaaacccacttctcctatttggtggcttatcatgtaactatgtctcttcttccactggactgcgaggtcgtctcagatggcttcattccgataccagtttttcattaCcccggttatacctggaccaaattcagaggaagtgcagaaagaatcctcaatttctctgagaccacgttctggtggaatttctacgattgcctacagtgtgaacaacagggaggacgttgcgcattcagctcgcaaaggaatcaaacattctgcatacgtcgaggttcacatgtcaaagtaattgcagctacatcatcggttgccgcatttgttgttcttttgttgatggtggccactgcactctatctttctctgaagacaagatataacgaagagatacatctgaaggtcgaaatgtttctcaaaacgtatggcacatcgaaacccacgaggtacactttctccgaagtaaagaagatagcaagacggttcaaggctaaagtaggacaaggtggatttggaagtgtgtacagaggtgagctaccaaatggagtccctgtggcggttaagatgctagaaaattccgaaggggagggaaatgaattcatcaatgaggttgcaactatagggagaatccaccatgcaaacattgtccgcctccttggcttttgctcagaaggaacaaggcgggctctcatttacgaatacatgcctaatgattcgctggagaaatatatattttcacatgattctgatacttctcaagaagccctagtaccaagcaagatgctagatattgctataggcattgcccgaggaatggagtacctgcatcaaggatgtaaccagcgtatcctccactttgacatcaagcctaacaacatcttgctggactataacttcagtccaaagatttcagactttggccttgcaaagctgtgtgcaagggaccaaagcattgttaccttgactgcagcaagaggcacaatgggctatattgcaccagagctatattctcggaactttggagagatatcttacaagtcagatgtttatagtttcggcatgctggtgttagaaatggttagcggaaggaggaactcagacccaagtgttgaaagccaaaatgtggtctatttcccagaatggatctatgagcaggttaccattgggcgggatttagaacttggtagggaaatgtctgaagtagaaaaagcaacaatgaggcagctggccattgtggcactatggtgcattcagtggaacccaaagaaccggccatcaatgacaaaggtggtgaacatgctaacagggaggttgcagaatctacaggtgccacctaagccgtttttctcagctgatagccatcctgtgctgcaagacttgcagaacatgctggcataa
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| Protein seq | MAKLLVVVLLLSLLIYAATAWDAEGFFNFKSCPPHQCSKHGPKVRFPLSLVSQSPSCGTPLMELSCSGQDTILYHPVLGSCKVTAISYKHAAMTIIPLVDSTPHCPLQKLISTNLSTDVYKPQTLEAASLSDCKVVSKGIQAPSTFKETENGVIGVDELVFTWYSSDITRDCQKCENEGKHCGFSSQRGRALCYYGSNVIIIIASSAAIIIVLLLIVPIALCLFLKSQYNEEVHLKVEMFLKTYGTSKPKRYTFSEVRKISRRFKHKLGQGGFGSIYKGELPNGVPVAVKMLENSIGDGHEFINEVATIGTIHHANVLRLLGFCSEGTRRALIYEFMPNDSLEKYIFSQGPNVSRDYLVPEKMVDVALGIARGMEYLHQGCNQRILHFDIKPHNILLDYRFNPKIADFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGAISYKSDVYSFGILVLEMVSGRRNLDPSIETQHEVYFPEWIYEKVFTGQQLTVGMEMTQVEKNRVRQLAIVALWCIQWNPRNRPSTTQLKKVTAWEDKDFFSYCPPSRCSEHGPEIRFPFQLESKNTPSSCGVPCMKLSCSGQDTILDNKYYLGRPYKVTAIDYKHALLTAVPLADEDNYSSPSPCPLLKSISIRPNLMTGYGYCNLGRYQNPCQTYDTYCAALVSCSTEFALASVPGPATDNDYIAGPISCLSNQTHFSYLVAYHVTMSLLPLDCEVVSDGFIPIPVFHYPGYTWTKFRGSAERILNFSETTFWWNFYDCLQCEQQGGRCAFSSQRNQTFCIRRGSHVKVIAATSSVAAFVVLLLMVATALYLSLKTRYNEEIHLKVEMFLKTYGTSKPTRYTFSEVKKIARRFKAKVGQGGFGSVYRGELPNGVPVAVKMLENSEGEGNEFINEVATIGRIHHANIVRLLGFCSEGTRRALIYEYMPNDSLEKYIFSHDSDTSQEALVPSKMLDIAIGIARGMEYLHQGCNQRILHFDIKPNNILLDYNFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSVESQNVVYFPEWIYEQVTIGRDLELGREMSEVEKATMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQVPPKPFFSADSHPVLQDLQNMLA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0001170 | OsLima_01g0001170.02 | Chr01 | 833000 | 835954 | + | IsoSeq | ||
| CDS seq | atcatgttctggacaggacaccattctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccactccagaagctcatctctacaaatttatc |
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| Protein seq | IMFWTGHHSVSPSSRLLQGDCNILQACCHDHHPACRFHTSLPTPEAHLYKFI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.907174 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0117300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02840 | RBH | 0.344330 | 0.272728 | 0.401901 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0117300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001330 | RBH | 0.173494 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001080 | SBH | 0.069754 | 0.307502 | 0.332710 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001310 | RBH | 0.303854 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001230 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001300 | RBH | 1.385442 | 0.0 | 1.218488 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0016900 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001280 | RBH | 0.0 | 0.0 | 0.067795 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0014500 | RBH | 0.0265545 | 0.0553125 | 0.153599 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001090 | RBH | 0.046334 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001390 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001280 | RBH | 4.810340 | 6.290120 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001370 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001290 | RBH | 0.065702 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001390 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001130 | RBH | 0.898583 | 0.000000 | 0.000000 |
