Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0007000 | OGI:12001090 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:501584-501901 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGGCGTCGGTCGAGTGCGCGGTCTGCCTCAGCGTCGTCGACGAGGGGGAGAAGGTGAGGCAGCTCCCGGCGTGCGGGCATGTTTTCCACCAGGAGTGCATCAACATGTGGCTCTCGTCCCACGCCTCATGCTCGGTCTGCCACAGGAAGGCCGCGCCAGCCGACGAGCTTGCTGACGCCATAGCCGTGTGCATATCGGTGAAGCGCGACGTCGTCGTGCCAGCCTCCTCGTCGCCGCCGAGCTCGCCCGCCGGCTCTCCGCCCGCAGCTCGCATCCGTGCATGCCCATCGTCTCTCCGCCCGCCGCTGGCCTGA |
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| CDS seq | ATGGCGGCGTCGGTCGAGTGCGCGGTCTGCCTCAGCGTCGTCGACGAGGGGGAGAAGGTGAGGCAGCTCCCGGCGTGCGGGCATGTTTTCCACCAGGAGTGCATCAACATGTGGCTCTCGTCCCACGCCTCATGCTCGGTCTGCCACAGGAAGGCCGCGCCAGCCGACGAGCTTGCTGACGCCATAGCCGTGTGCATATCGGTGAAGCGCGACGTCGTCGTGCCAGCCTCCTCGTCGCCGCCGAGCTCGCCCGCCGGCTCTCCGCCCGCAGCTCGCATCCGTGCATGCCCATCGTCTCTCCGCCCGCCGCTGGCCTGA |
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| Protein seq | MAASVECAVCLSVVDEGEKVRQLPACGHVFHQECINMWLSSHASCSVCHRKAAPADELADAIAVCISVKRDVVVPASSSPPSSPAGSPPAARIRACPSSLRPPLA |
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| Function | E3 ubiquitin-protein ligase EL5 [UniProtKB/Swiss-Prot:Q9LRB7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0007000 | OsMH63_12T0007000.1 | Chr12 | 501584 | 501901 | + | maker | ||
| CDS seq | ATGGCGGCGTCGGTCGAGTGCGCGGTCTGCCTCAGCGTCGTCGACGAGGGGGAGAAGGTGAGGCAGCTCCCGGCGTGCGGGCATGTTTTCCACCAGGAGTGCATCAACATGTGGCTCTCGTCCCACGCCTCATGCTCGGTCTGCCACAGGAAGGCCGCGCCAGCCGACGAGCTTGCTGACGCCATAGCCGTGTGCATATCGGTGAAGCGCGACGTCGTCGTGCCAGCCTCCTCGTCGCCGCCGAGCTCGCCCGCCGGCTCTCCGCCCGCAGCTCGCATCCGTGCATGCCCATCGTCTCTCCGCCCGCCGCTGGCCTGA
More
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| Protein seq | MAASVECAVCLSVVDEGEKVRQLPACGHVFHQECINMWLSSHASCSVCHRKAAPADELADAIAVCISVKRDVVVPASSSPPSSPAGSPPAARIRACPSSLRPPLA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0108350 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g01750 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0108350 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0008200 | SBH | 0.0 | 0.0 | 1.220803 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0001040 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001050 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0001000 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0001430 | SBH | 169.357361 | 0.000000 | 413.709320 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0012800 | SBH | 0.0296645 | 0.0510725 | 0.1422095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0001420 | SBH | 9.309703 | 0.0 | 80.600060 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0007200 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0000870 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001470 | SBH | 20.460825 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0003580 | SBH | 0.0 | 14.416095 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0000990 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0001020 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G001000 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001080 | SBH | 1.391647 | 0.0 | 0.0 |
