Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0419400 | OGI:11079110 | 9/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:31305917-31308004 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGCATAACCGAAGAGAAACAAGTTCATCATCTGCGGGACATAGGGATTGAGATTGTTCACCAATGTGGTTATCTCCCACTAGCAATAAAGATCATCGCCAAAGTTTTAATTAGCAAAGAGAAAACAAATGATGAATGGAAAAGGATATTGAGCAACAATTCGTGGTCCATGAATAATCTTCCTGATGAACTAAGAGCTTTATATCTGAGTTACAGTGAGCTATCACACCAACTGAAACAATGTTTTCTTTATTGTGCTATATATCCTGAACATTCAACCATTAACCGTGATGATCTTACTAGTATGTGGGTGGCTGAAGGCTTCATTGATGAGCAGAAAGGCCAACTACTAGAAGATACAGCAGTAGAATACTACAATGAGCTGATCCATCGGAACCTCCCTCAACTAGACCTTTCATATTTTGACCTAGGTGGGTGCAAGATGCATGGTCTCTTAAGGCAGCTTGTTTGCTATTTATCAAGAGAAGAATGTTTTGTTGGAGATCCAGAATCACAAAATGGTAATACAATGAGTAAAATGCGACGTGTTTCTGTGGTGACAGAGAAGGACACGGTGGTGTTACCAAGTATGGATAAGAAGCAGTATAAAGTGAGGACTTACAGAACTTCATATTCCAAGTCACTGAGAGTTTACAATCCACTTTTCAAGAGGCTTACATATCTCCGTGTTTTGGATTTGACTGGCACACTTGTACAGAGCATCCCAAGTCACATTGGAAATTTGATTCATATGCGTTTGATTAATCTTGATGGGACAAACATATCTCGTCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAAGTACTGAACCTGCAAAGGTGTAAATCTTTGTACAGGCTTCCTTTGGCAACCACGAAACTATGCAATTTAAGGCGGCTTGGTCTTCTTGATACACCAATAAATAAGGTTCCAAAAGGGATAGGAAGACTGCAATTCCTTAATGATTTGGAAGGATTTCCTATTGGAAGTGTAACTTACAATAAAAAAATGCAAGATGGATGGAATTTGGAAGACTTGGCTGATCTTTCACAGTTGAGGCGGCTTGTTATGGTAAAACTAGAAAGATGTACTCCTTGCAGCAGTGAAGATTCATTTCTCCTAACAAACAAAGAACATCTGAAAGTTCTATATCTAGAATGCACTGAACCAACAAATGAAGCATGTTCAGATGAACATGTTAAACATGTTGAGAATATCTTCGAGCAGCTAGTCCCTCCACAGAACTTGAAAGATCTATCTGTTCTGAGATTCCTTGGTCAGAACTTACCCTCCTGGCTTTGTAATGTCTATCTACCTTCACTGAAATATTTGATCCTCTCTGATTGCAAATCTTGCATACATCTTCCACCAATATGGCAGCTACCCAACTTGGAACGCCTGAAAATTGTGAAAGCAACTGCAATTACCAAGATCGGACCCGAATTTATTGGGCAATTTCCAAGATCCAGGGAAGCAGTTGCTTTCCCCAAGCTTGAATGGTTGATCATCAATGATATGCCCAACTGGGAGGAATGGGCCTTTACTGAAGAAGATGAGATATCACTTGCAGCAATGAAGGAAGGAGGAGGGGATGGAACTGCTGTGGCCGAAGAGGAGGAGATATCACTTGCAGCAATGAATGAAGGAGGAGAGGATGGAACCACTGTGACGGAAAAGGGGGAAGCCTCATTTCCAAGGTTGTGTGTGCTGCCCTCTTTGAAGAGGTTGGACATTGATAACTGCCCCAAGCTGAGGGCTCTCCCACAACAGCTTGGACACGAGGCCACCAGTTTGAAAGAGCTCTCCCTTGTAGCAGCAAGCTGCTTGAAGTCGGTGAAGGACCTTCCATCCCTATCTGGTTTCCTTTCTGTTTGTAGATGTGAAGGCCTAGAGAGGGTTACAGAACTTCCCAAAGTGAGAAAGCTGTTTGTAAGTGTTTGTCCAAATTTGAGCTGTGTTGAGGAGTTAGGCAGTTTGGAGCAGCTATGGTTGGATGTGAATATGGAGGACTCATCACCGTGGGTGCATGGGCTTCGAGAGCAGTACCGCCACCTGGATGTCTACACGTGGCCTAGAGAGTGA
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| CDS seq | ATGGGCATAACCGAAGAGAAACAAGTTCATCATCTGCGGGACATAGGGATTGAGATTGTTCACCAATGTGGTTATCTCCCACTAGCAATAAAGATCATCGCCAAAGTTTTAATTAGCAAAGAGAAAACAAATGATGAATGGAAAAGGATATTGAGCAACAATTCGTGGTCCATGAATAATCTTCCTGATGAACTAAGAGCTTTATATCTGAGTTACAGTGAGCTATCACACCAACTGAAACAATGTTTTCTTTATTGTGCTATATATCCTGAACATTCAACCATTAACCGTGATGATCTTACTAGTATGTGGGTGGCTGAAGGCTTCATTGATGAGCAGAAAGGCCAACTACTAGAAGATACAGCAGTAGAATACTACAATGAGCTGATCCATCGGAACCTCCCTCAACTAGACCTTTCATATTTTGACCTAGGTGGGTGCAAGATGCATGGTCTCTTAAGGCAGCTTGTTTGCTATTTATCAAGAGAAGAATGTTTTGTTGGAGATCCAGAATCACAAAATGGTAATACAATGAGTAAAATGCGACGTGTTTCTGTGGTGACAGAGAAGGACACGGTGGTGTTACCAAGTATGGATAAGAAGCAGTATAAAGTGAGGACTTACAGAACTTCATATTCCAAGTCACTGAGAGTTTACAATCCACTTTTCAAGAGGCTTACATATCTCCGTGTTTTGGATTTGACTGGCACACTTGTACAGAGCATCCCAAGTCACATTGGAAATTTGATTCATATGCGTTTGATTAATCTTGATGGGACAAACATATCTCGTCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAAGTACTGAACCTGCAAAGGTGTAAATCTTTGTACAGGCTTCCTTTGGCAACCACGAAACTATGCAATTTAAGGCGGCTTGGTCTTCTTGATACACCAATAAATAAGGTTCCAAAAGGGATAGGAAGACTGCAATTCCTTAATGATTTGGAAGGATTTCCTATTGGAAGTGTAACTTACAATAAAAAAATGCAAGATGGATGGAATTTGGAAGACTTGGCTGATCTTTCACAGTTGAGGCGGCTTGTTATGGTAAAACTAGAAAGATGTACTCCTTGCAGCAGTGAAGATTCATTTCTCCTAACAAACAAAGAACATCTGAAAGTTCTATATCTAGAATGCACTGAACCAACAAATGAAGCATGTTCAGATGAACATGTTAAACATGTTGAGAATATCTTCGAGCAGCTAGTCCCTCCACAGAACTTGAAAGATCTATCTGTTCTGAGATTCCTTGGTCAGAACTTACCCTCCTGGCTTTGTAATGTCTATCTACCTTCACTGAAATATTTGATCCTCTCTGATTGCAAATCTTGCATACATCTTCCACCAATATGGCAGCTACCCAACTTGGAACGCCTGAAAATTGTGAAAGCAACTGCAATTACCAAGATCGGACCCGAATTTATTGGGCAATTTCCAAGATCCAGGGAAGCAGTTGCTTTCCCCAAGCTTGAATGGTTGATCATCAATGATATGCCCAACTGGGAGGAATGGGCCTTTACTGAAGAAGATGAGATATCACTTGCAGCAATGAAGGAAGGAGGAGGGGATGGAACTGCTGTGGCCGAAGAGGAGGAGATATCACTTGCAGCAATGAATGAAGGAGGAGAGGATGGAACCACTGTGACGGAAAAGGGGGAAGCCTCATTTCCAAGGTTGTGTGTGCTGCCCTCTTTGAAGAGGTTGGACATTGATAACTGCCCCAAGCTGAGGGCTCTCCCACAACAGCTTGGACACGAGGCCACCAGTTTGAAAGAGCTCTCCCTTGTAGCAGCAAGCTGCTTGAAGTCGGTGAAGGACCTTCCATCCCTATCTGGTTTCCTTTCTGTTTGTAGATGTGAAGGCCTAGAGAGGGTTACAGAACTTCCCAAAGTGAGAAAGCTGTTTGTAAGTGTTTGTCCAAATTTGAGCTGTGTTGAGGAGTTAGGCAGTTTGGAGCAGCTATGGTTGGATGTGAATATGGAGGACTCATCACCGTGGGTGCATGGGCTTCGAGAGCAGTACCGCCACCTGGATGTCTACACGTGGCCTAGAGAGTGA
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| Protein seq | MGITEEKQVHHLRDIGIEIVHQCGYLPLAIKIIAKVLISKEKTNDEWKRILSNNSWSMNNLPDELRALYLSYSELSHQLKQCFLYCAIYPEHSTINRDDLTSMWVAEGFIDEQKGQLLEDTAVEYYNELIHRNLPQLDLSYFDLGGCKMHGLLRQLVCYLSREECFVGDPESQNGNTMSKMRRVSVVTEKDTVVLPSMDKKQYKVRTYRTSYSKSLRVYNPLFKRLTYLRVLDLTGTLVQSIPSHIGNLIHMRLINLDGTNISRLPESIGNLQNLQVLNLQRCKSLYRLPLATTKLCNLRRLGLLDTPINKVPKGIGRLQFLNDLEGFPIGSVTYNKKMQDGWNLEDLADLSQLRRLVMVKLERCTPCSSEDSFLLTNKEHLKVLYLECTEPTNEACSDEHVKHVENIFEQLVPPQNLKDLSVLRFLGQNLPSWLCNVYLPSLKYLILSDCKSCIHLPPIWQLPNLERLKIVKATAITKIGPEFIGQFPRSREAVAFPKLEWLIINDMPNWEEWAFTEEDEISLAAMKEGGGDGTAVAEEEEISLAAMNEGGEDGTTVTEKGEASFPRLCVLPSLKRLDIDNCPKLRALPQQLGHEATSLKELSLVAASCLKSVKDLPSLSGFLSVCRCEGLERVTELPKVRKLFVSVCPNLSCVEELGSLEQLWLDVNMEDSSPWVHGLREQYRHLDVYTWPRE |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0419400 | OsMH63_11T0419400.1 | Chr11 | 31305917 | 31308004 | + | maker | ||
| CDS seq | ATGGGCATAACCGAAGAGAAACAAGTTCATCATCTGCGGGACATAGGGATTGAGATTGTTCACCAATGTGGTTATCTCCCACTAGCAATAAAGATCATCGCCAAAGTTTTAATTAGCAAAGAGAAAACAAATGATGAATGGAAAAGGATATTGAGCAACAATTCGTGGTCCATGAATAATCTTCCTGATGAACTAAGAGCTTTATATCTGAGTTACAGTGAGCTATCACACCAACTGAAACAATGTTTTCTTTATTGTGCTATATATCCTGAACATTCAACCATTAACCGTGATGATCTTACTAGTATGTGGGTGGCTGAAGGCTTCATTGATGAGCAGAAAGGCCAACTACTAGAAGATACAGCAGTAGAATACTACAATGAGCTGATCCATCGGAACCTCCCTCAACTAGACCTTTCATATTTTGACCTAGGTGGGTGCAAGATGCATGGTCTCTTAAGGCAGCTTGTTTGCTATTTATCAAGAGAAGAATGTTTTGTTGGAGATCCAGAATCACAAAATGGTAATACAATGAGTAAAATGCGACGTGTTTCTGTGGTGACAGAGAAGGACACGGTGGTGTTACCAAGTATGGATAAGAAGCAGTATAAAGTGAGGACTTACAGAACTTCATATTCCAAGTCACTGAGAGTTTACAATCCACTTTTCAAGAGGCTTACATATCTCCGTGTTTTGGATTTGACTGGCACACTTGTACAGAGCATCCCAAGTCACATTGGAAATTTGATTCATATGCGTTTGATTAATCTTGATGGGACAAACATATCTCGTCTCCCAGAGTCCATTGGTAACCTTCAAAATCTTCAAGTACTGAACCTGCAAAGGTGTAAATCTTTGTACAGGCTTCCTTTGGCAACCACGAAACTATGCAATTTAAGGCGGCTTGGTCTTCTTGATACACCAATAAATAAGGTTCCAAAAGGGATAGGAAGACTGCAATTCCTTAATGATTTGGAAGGATTTCCTATTGGAAGTGTAACTTACAATAAAAAAATGCAAGATGGATGGAATTTGGAAGACTTGGCTGATCTTTCACAGTTGAGGCGGCTTGTTATGGTAAAACTAGAAAGATGTACTCCTTGCAGCAGTGAAGATTCATTTCTCCTAACAAACAAAGAACATCTGAAAGTTCTATATCTAGAATGCACTGAACCAACAAATGAAGCATGTTCAGATGAACATGTTAAACATGTTGAGAATATCTTCGAGCAGCTAGTCCCTCCACAGAACTTGAAAGATCTATCTGTTCTGAGATTCCTTGGTCAGAACTTACCCTCCTGGCTTTGTAATGTCTATCTACCTTCACTGAAATATTTGATCCTCTCTGATTGCAAATCTTGCATACATCTTCCACCAATATGGCAGCTACCCAACTTGGAACGCCTGAAAATTGTGAAAGCAACTGCAATTACCAAGATCGGACCCGAATTTATTGGGCAATTTCCAAGATCCAGGGAAGCAGTTGCTTTCCCCAAGCTTGAATGGTTGATCATCAATGATATGCCCAACTGGGAGGAATGGGCCTTTACTGAAGAAGATGAGATATCACTTGCAGCAATGAAGGAAGGAGGAGGGGATGGAACTGCTGTGGCCGAAGAGGAGGAGATATCACTTGCAGCAATGAATGAAGGAGGAGAGGATGGAACCACTGTGACGGAAAAGGGGGAAGCCTCATTTCCAAGGTTGTGTGTGCTGCCCTCTTTGAAGAGGTTGGACATTGATAACTGCCCCAAGCTGAGGGCTCTCCCACAACAGCTTGGACACGAGGCCACCAGTTTGAAAGAGCTCTCCCTTGTAGCAGCAAGCTGCTTGAAGTCGGTGAAGGACCTTCCATCCCTATCTGGTTTCCTTTCTGTTTGTAGATGTGAAGGCCTAGAGAGGGTTACAGAACTTCCCAAAGTGAGAAAGCTGTTTGTAAGTGTTTGTCCAAATTTGAGCTGTGTTGAGGAGTTAGGCAGTTTGGAGCAGCTATGGTTGGATGTGAATATGGAGGACTCATCACCGTGGGTGCATGGGCTTCGAGAGCAGTACCGCCACCTGGATGTCTACACGTGGCCTAGAGAGTGA
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| Protein seq | MGITEEKQVHHLRDIGIEIVHQCGYLPLAIKIIAKVLISKEKTNDEWKRILSNNSWSMNNLPDELRALYLSYSELSHQLKQCFLYCAIYPEHSTINRDDLTSMWVAEGFIDEQKGQLLEDTAVEYYNELIHRNLPQLDLSYFDLGGCKMHGLLRQLVCYLSREECFVGDPESQNGNTMSKMRRVSVVTEKDTVVLPSMDKKQYKVRTYRTSYSKSLRVYNPLFKRLTYLRVLDLTGTLVQSIPSHIGNLIHMRLINLDGTNISRLPESIGNLQNLQVLNLQRCKSLYRLPLATTKLCNLRRLGLLDTPINKVPKGIGRLQFLNDLEGFPIGSVTYNKKMQDGWNLEDLADLSQLRRLVMVKLERCTPCSSEDSFLLTNKEHLKVLYLECTEPTNEACSDEHVKHVENIFEQLVPPQNLKDLSVLRFLGQNLPSWLCNVYLPSLKYLILSDCKSCIHLPPIWQLPNLERLKIVKATAITKIGPEFIGQFPRSREAVAFPKLEWLIINDMPNWEEWAFTEEDEISLAAMKEGGGDGTAVAEEEEISLAAMNEGGEDGTTVTEKGEASFPRLCVLPSLKRLDIDNCPKLRALPQQLGHEATSLKELSLVAASCLKSVKDLPSLSGFLSVCRCEGLERVTELPKVRKLFVSVCPNLSCVEELGSLEQLWLDVNMEDSSPWVHGLREQYRHLDVYTWPRE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.058913 | 75.299419 | 0.0127245 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676500 | SBH | 0.0 | 0.000000 | 3.153747 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45130 | SBH | 0.0 | 0.000000 | 0.139361 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023750 | SBH | 0.000000 | 86.644440 | 2.468501 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023620 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0420800 | SBH | 0.2352695 | 1.2420205 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430900 | SBH | 0.8587925 | 169.4659275 | 0.384886 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023750 | SBH | 0.067782 | 1.569802 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022970 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023340 | SBH | 0.478029 | 16.708927 | 1.419603 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023770 | SBH | 1.450534 | 236.263718 | 0.217790 |
