Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0023770 | OGI:11079110 | 9/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:29561512-29572284 | ||||||||
| Gene Symbol | YR2, YR6, YR9, YR10, YR21, YR23, - | ||||||||||
| DNA seq | atggcagcggtattagatgctttgattgtctcatgcatcaagaagttgcagtttatcattacagacaaggcaatactcattttaggggtagaagatgaacttgaagaactgcagcgaagaacagacgtcataagatcttctcttcaggatgctgaggcaaggaggatggaagattcagcagttgaaaaatggcttgaccagctaagagatgttatgtatgatgtcgatgatattattgatttggctagatttaaaggaagcatcctactagctgaccatcctccatcatcatcaagcaaaccaacacgttgcaattgcccttcgtgtcattgtaatatttggacacgtcatgaggttgctgttaagattagaagcctgaacaaaaagatagcgaacatttcaaatgatgaagtacttcaagatctcagacgtagaccgcatccgagaaatggttcgatatggacaccgataaaaacctccagcatagttgaacccaaccttgtgggtgaagaggtcatacttgcttgcagagaattggtggatttggttattgaaaataaggaaaagaaggattacaagcttggtattgtagggacaggaggagttggcaagacaacacttgctcagcaaatatataatgatgaaaaaataacagggaatttcgataaacatgcatgggtttgtgtttcaacagacagcacacaaacttctctattggaagaagttcttcggatcatgaaaattcgatatgggaaagcaaaatcagttgaagagctccAaaacaagctcaaatcagccattaaagagaagagttttttccttgtgctagatgatgtatgggaatctaatgcgtggactaattcacttcaaaaaccattgcatgctgcagccaaggggatagttatagtaactacgagaaatgaaaaagtagctcaggaaattaaagtggaccatacccatcaagttcatttgatgtcagaaaatgtaggatgggatctactttggaagagcatgggcataaccgaagagaaacaagttcatcatctgcgggacatagggattgagattgttcaccaatgtggttatctcccactagcaataaagatcatcgccaaagttttaattagcaaagagaaaacaaatgatgaatggaaaaggatattgagcaacaattcgtggtacatgaataatcttcctgatgaactaagagctttatatctgagttacagtgagctatcacaccaactgaaacaatgttttctttattgtgctatatatcctgaacattcaaccattaaccgtgatgatcttactagtatgtgggtggctgaaggcttcattgatgagcagaaaggccaactactagaagatacagcagtagaatactacaatgagctgatccatcggaacctccttcaactagacctttcatattttgacctaggtgggtgcaagatgcatggtctcttaaggcagcttgtttgctatttatcaagagaagaatgttttgttggagatccagaatcacaaaatggtaatAaaatgagtaaaatgcgacgtgtttctgtggtgacagagaaggacacggtggtgttaccaagtatggataagaagcagtataaagtgaggacttacagaacttcatattccaagtcactgagagtttacaatccacttttcaagaggcttacatatctccgtgttttggatttgactggcacacttgtacagagcatcccaagtcacattggaaatttgattcatatgcgtttgattaatcttgatgggacaaacatatctcgtctcccagagtccattggtaaccttcaaaatcttcaagtactgaacctgcaaaggtgtaaatctttgtacaggcttcctttggcaaccacgaaactatgcaatttaaggcggcttggtcttcttgatacaccaataaataaggttccaaaagggataggaagactgcaattccttaatgatttggaaggatttcctattggaagtgtaacttacaataaaaaaatgcaagatggatggaatttggaagacttggctgatctttcacagttgaggtggcttgttatggtaaaactagaaagatgtactccttgcagcagtgaagattcatttctcctaacaaacaaagaacatctgaaagttctatatctagaatgcactgaaccaacaaatgaagcatgttcagatgaacatgttaaacatgttgagaatatcttcgagcagctagtccctccacagaacttgaaagatctatctgttctgagattccttggtcagaacttaccctcctggctttgtaatgtctatctgccttcactgaaatatttgatcctctctgattgcaaatcttgcatacatcttccaccaatatggcagctacccaacttggaacgcctgaaaattgtgaaagcaactgcaattaccaagatcggacccgaatttattgggcaattttcaagatccagggaagcagttgctttccccaagcttgaatggttgatcatcaatgatatgcccaactgggaggaatgggcctttactggagaagatgagatatcacttgcagcaatgaaggaaggaggaggggatggaactgctgtggccgaagaggaggagatatcacttgcagcaatgaatgaaggaggagaggatggaaccactgtgacggaaaagggggaagcctcatttccaaggttgtgtgtgctgccctctttgaagaggttggacattgataactgccccaagctgagggctctcccacaacagcttggacacgaggccaccagtttgaaagagctctcccttgtagcagcaagctgcttgaagtcggtgaaggaccttccatccctatctggtttcctttctgtttgtagatgtgaaggcctggagagggttacagaacttcccaaagtgagaaagctatttgtaagtgtttgtccaaatttgagctgtgttgaggagttaggcagtttggagcagctatggttggatgtgaatatggaggactcatcaccgtgggtgcatgggcttcgagagcagtaccgccacctggatgtctacacgtggcctagagagtgagatgtgaagacccaactaaaagacagtagattggtagagacacaaggtaagggcattggctttgtatttgttgatacatatttttattctatcgttatctaaaatagtggaaacatattttaatttcattccaactttgcatattttcagccAaaatcatgcatgtctaatgttattctcacctgtacactttacattcattgatgttgtacactttgcatcattcttagtaaggagatcatcatatatattagacaaaatgtcaaactttcggtagttgttatgattaatatttgtacctatattactgaccttgtcacctaacactagtacagaaatccttaaactttgtgttgtaattattctcaatgtccataaccagtacagaaacaagtgttatagcattttataatctattatatcctaaagtacattaaactttctacaaacgcttctaagccatcacgtagcactcctacgaacactcctaagcctccacatgacattctaataaattaaagaaatttctaaaaattctgagaaaaacaaaaacatcttgtcatttatctttattaaatctggtgaacccatcatttacaaccattagatctagtcgtcaacccgtgcgttgtatgggttattaaaatatttaagaaattcaattgtacatgtggttgaatacatgggttaaaatgattattttgcttaaaaaaatgttggaatggcggcattcggacatccagtctcttgtactttaccatgatttgacttggaaaacagtgagggaagtctccacggttcggatataatgatgattaatccaaaactaattaattaattcaattAaaaatactcaactacagtaccatgactatagctggccaaatgggtggcccggcccaacacgcacggccccactactggcacgacccactaaggcacggcaactgtagcaggccgtgcacgtggcccataaaaaattgaaaattgagggaaaaataatatgaagttAaaaaatgaataaagataggaaaaacgtgaggaaaatttaggaaatatattagaaaatatatggtaaaaataggataaaatatgaaaaaaaataaaaaaaatatgagaaaaatatgggaaaaattagaaaattgtagggaaaataaatgggcagctgggccgtgctcgtgccgacccgtcaacaggcatgccgtgccgtgtaagccgtttttttgacaaattgacccttttcaaaaacttatttcgaaactaacccatgccaaaaacttcaaccaaaaataggccgtcgtctcagcgccaaacacattggcgctgacgttggccgtgtcagcgccaacgggactggcgctgacattgtgccaccgtggcggccgggccgatcccctagctgacgttgcagctacctcagcgccaaacgcttcggcgcggaggtgcccaacctcagcgccaaccggactggcgctgaggtgagacttggccgcaacccccaggcccagaccagcaagccttctggatggcttgcgggctgggacctcagtgccagccataatggcgctgactgtgggaaactcggcgccaGgttggctggcgctgaggtgggacttggccgtttcggccttggcccagcccagcaagccttctggatggcttgcgggctgggacctcagcgccagccaaaatggcgctgactgtgggaaactcagcgccagtccacctggcgctgaggtgggacttggccgtttcggccttggcccagcccagcaagccttctggatggcttgcgggctgggacctcagcgccagccataatggcgctgattgtgggaaactcagagccagtccacctggcgctgaggtgggacttggccgtttcggccgtggtccagcccagcaagccttctggatggcttgcgggctgggacctcagcgccagccataatggcgctgattgtgggaaactcagcgccagtccacctggcgctgaggtgggacttggccgtttcggccgtggtccagcccagcaagccttctggatggctgggctggaacctcagcgccaggtgcactggcgctgagtttggacatgtcagcgccatttagcatggcgctgacgtcccagccctgctaaactttagcaaaactttgcacacaacacaggcaaacatcaaatgacagaaatttacaggcagtaatatatccagagaaccatacAaaacatacatccatccatcaatcccaacatcattccatacatccatagaatccatcaatacatccatatatccagtctatacatccagtcgagtccatacatacagtccatacatctatcgaaccatgcatcaagtccatccatctatccatccatccattgaaccatgcactcacctcctcctacctctagtgcgaggacgaggcacgtcGggggtgtacctccagtcctgcgaaggagcccgccggcgtcgtggtcgagacgggccgggctgcgagatatccggctgtgacgactctggtgcgtcctctagctgcgagggaccgagctcatccgcctcctcttctctgtcctcatccccttcttcctcctcatctccttcctccgcctctttgtcttgctcgccctcctcgtcacccacctccccttcttcatccccctcttggtgggcatgagcatgttcgaccacatcagtcgacttgcagccgagccttgctgccaacttccgacatcgctgccgtagtctctgcataaaaaataatccatgttaagttatcgcttttggaagaaaacaccgtagtttcatctctttccaacgattacctgtagggcgttgcggagggtgccgccctctccttcggagccaggagccgtgcctagcgccactcccgcgtcgttgacggtccgcaagagctctcgagcctgtaggattgaaatgaagtaagtcacaacatatatggcattgaaatgaaataatatacaacattaatgctagaaactaaccactctgtcgcgaacaggtcccgtctcgaccgtggtacctagacgggtacgagtatcgtactcgttctgctcctcaacatcctcggggtcatccgctatgtcggctagtgtccaagccggacgtaggacaagacggtaggtcctgtggagccacgccaagtacaagtcgaactacgccaagcacgaataactctccatcataacttggccactgcgatggatctaggtaaggttcaaacctaggggagtacgagtcctgcacagccttattggaagcttcataacacattcggggggccacctccacatccaaacctcgcaacttacaaacggttatcatgtgggatcatggcaagtgatggagctgagggaactgacaactacatgtgttatctctcgcaaccacgacgtagtgacgtccaccccattgaaccccagccgccgtgactccgccttgctcgctgacctcatacttcatcgaagggaaatcaaaacatgctgttctttgccccaaggttcgtctttgctgctcctccaacatgtccttaacttttgtgggccacttctttccacacaggatatctacagttgcctctttgtgtctatcgacaaaccaactattgcacttcgaaaatgtgtatgccacaatagctgtaaccggcagtttccgaatgcctctcaatacattattgaaactctcggccatattactagtcatgatgctatgacgacgcccgttggtatcaaatgctcttgcccatttgaccttaagtggcatatggtcttctagccacttctttggcctctctccgaccacacccatgaggTgttttatctcatctaggaacaatgctttctcatttatttgacatatgcgctcaagatctttcatctgatcagtcgtagctccagctgtgtagaagttagcacagaagtgcctcatgcaccacctgtggtgaatggttaggtgatgaggcatgatgtggatgatggagttcaaaatgccagggtgtctatcagaaattatacacacttttctattaggaccgatcaacttgtttctcaacatgttgatgaaccactcccagttggatgtattctccttctctaccagagcaaaagccaagggaacaagatgtaacccggcgtcgacccctattgccgtgagcaatgtaccttggtatttaccggttaagaaagtgccatcaattgctagcaccggcctcaagtgcttgaatgcttctatggactggccaaatatccaatatgcacgtccaaatactcgcctctgtactccatccaccatcctggacttctcgggatgagcctcaacacggaaatgcatggtagggttctttgctttgatggcacgcatcagtgtaggcaagcgaacatacgcctcgtcccaatctccccaaatgaccttcatagcaacttgcttagcacgccatgctttgccatacgtaggccgatagtgccatatttgctcaactgcctcgacaatcgctgctggagatAaagttggttcagctcgcacaaatgcctgtaacctgtttccaataaaccttgaagtaagttgcaaatgcttgccggttacttccgcactacagcatgtgtggtcttcgcccaccctagtcacccgccacctatctcctccactcttccttgcattaatctgccatttgcaatggcgatcgagacaagccacagtatactttactgacgcgttagattccttcacatggtacggccggtggacacggatagaataactctgtaaccatattttcagatcatccatcgatcgaaactccaaccccttccttggttcatcacacattggttcgaaggcaccgtcatattgtggatccctatcagcaaatgctagcccagatctggtaagatcctcgaattgtgttatttccgggtttctacccaccagtttcgcaaacacagtcctttcatgctctgacatcttacgcactggacgatcatcatcggagtcggaagcggactcatccaattcatcctctgtatcatactccaaccagcctgggttcaatccactgcgtatcatagcctcctcacactcctctcgggtatagaatttcagcctagccaactcccttaggcccatacttacattcttagcattcgcttcttcctcaggcaactccacatcatctcctacctcccgaccatcctcaacatctccttcctctcttaccggcacattctactccacattgacttcctcccttaacggcacattgtcctctgcatgtacttcttcccttaacggcacattctcctctgcatgtacttcctcccttaccgggtcattctcttccctgacctccacatccgccatatcatttactccctcgcccccctccacgtcttcctcaatcaattcttccttcctactacacctctccgacagttcgtgacagctaatgggtgattctatgagtggactttcattagggtctataagttctttcttccctatcctaccatctttcttccatgcaaacacctcaagagatttgaaatgtgaccccaatactatatctatatatgtttgccattcgatctctccattcaagtctaacataaatttatgtgacatgacaccgccgcccacatcgtatctcccttgcataccaaccgactcatcattccaatccaattcatgcttgatgcgagacattaactcctcaaaggtaggcttcacaaaaaacactaattgcctaactgtcattccctcaaattggcttccatgtgtactttcatctaccacacaaccaccataatgaagccggaccaatctatccatctacaaTttttaacccatgcataaacattaattacttgaaaataatatgtaattaccattgcaataccaatacttcaaaagctaacaacatgtttaatttttccaataaataagtacattactcaaatactacacattattgataaaaaaaaaactctactcctacaaattacctacccttcaccacacatcaacccctttcaaaccctctcaatcaccacaaatccatcccacatcctaggccatcaccacacatccatctcccatcaaaccctagtgcatcaccaaacatccatcccaaatatattttgtcaaatgtatcaataacaaccaaatggataaagatatgccacctccacacttcatccccacccatattatccatctaataatccatccttagccaactattatcaaaccacgtctacaaccaaaacaatgcAaaatatccaataaaactttggggaacttagggtttatagaggggtttaccttctcttcctatcccaaactcaatgccgcacaaatcaccttcgattagagaggtttttGggggagattgggcgaggagaactcggtggcgaccgaaccctaggcgggcggctggggaaaaaacggaggaagaactggctggggcggcctcggccgggctctaagtagccaaggtcagcgccaacttacttggcgctgaggttgggcacctccgcgccgaagcggttggcgttgaggtagctgccacgtcagctaggggatcggcccggccgccacggtggcacaatgtcagcgccagtcccgttggcgctgacacggccaacctcagcgccaatgtgcttggcgctaagccgacggcctagttttggttgaagtttttggcaggggttagtttcgaaataagtttttgaaaatggtcaatttgtcaaaaaaacggccgtgtaagcccatgagctaaggtgctggcccAagcacgacacggacaaatgggccatgccggcacagcacacagtccgcccaacatctgttcctagtgtagggctcctaattaattaaggtttgtttggtgaaacaaaaaagccacctaaatgtctttgtattggttcaaattgattaatagttttgttcgtgttctacctgttaaaagaagaagaggatattgctgatcgacatgcctatgtatagtccatgtgtgtcttttccttatgccttttgtaatgcacgtgtattgtttggtaagttcaattccagaaaatatgattgttgaaaaactgatagcacatatattttcttttccttaattaagttattAaattaccaaaatacttatgtatatatacatccatgattaatttctgtgtgcttatttattttgtaggttgttaatcttgaagaatttGggctgtgcagtcacttgtaatatgtatttttgttttacctagttattggtctttgaaatattAaaaaaatgttattttttAaaaaaataaataaaacAaaaatatcaaaaaagggaaaatgtcaaaaaaaatattttttctttagctcttgtaaaatatattgtcatgtttcgttagattttgcgtgtgtgtttcttttctttttattttttattgtaggtgtgtaggtaactccgcctatgtcattgtaggtataactaaatgacatagccggtcccaagcccggaaaaaggaggaggggatagtttggtatagatgtgtgttgaaatgatgctccgttgctagatcattgggaattttctgcacttttattagattaatttcattttcagtgatggaatagttgtggaaacatttctggagactcatccaccctt
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| CDS seq | atggcagcggtattagatgctttgattgtctcatgcatcaagaagttgcagtttatcattacagacaaggcaatactcattttaggggtagaagatgaacttgaagaactgcagcgaagaacagacgtcataagatcttctcttcaggatgctgaggcaaggaggatggaagattcagcagttgaaaaatggcttgaccagctaagagatgttatgtatgatgtcgatgatattattgatttggctagatttaaaggaagcatcctactagctgaccatcctccatcatcatcaagcaaaccaacacgttgcaattgcccttcgtgtcattgtaatatttggacacgtcatgaggttgctgttaagattagaagcctgaacaaaaagatagcgaacatttcaaatgatgaagtacttcaagatctcagacgtagaccgcatccgagaaatggttcgatatggacaccgataaaaacctccagcatagttgaacccaaccttgtgggtgaagaggtcatacttgcttgcagagaattggtggatttggttattgaaaataaggaaaagaaggattacaagcttggtattgtagggacaggaggagttggcaagacaacacttgctcagcaaatatataatgatgaaaaaataacagggaatttcgataaacatgcatgggtttgtgtttcaacagacagcacacaaacttctctattggaagaagttcttcggatcatgaaaattcgatatgggaaagcaaaatcagttgaagagctccAaaacaagctcaaatcagccattaaagagaagagttttttccttgtgctagatgatgtatgggaatctaatgcgtggactaattcacttcaaaaaccattgcatgctgcagccaaggggatagttatagtaactacgagaaatgaaaaagtagctcaggaaattaaagtggaccatacccatcaagttcatttgatgtcagaaaatgtaggatgggatctactttggaagagcatgggcataaccgaagagaaacaagttcatcatctgcgggacatagggattgagattgttcaccaatgtggttatctcccactagcaataaagatcatcgccaaagttttaattagcaaagagaaaacaaatgatgaatggaaaaggatattgagcaacaattcgtggtacatgaataatcttcctgatgaactaagagctttatatctgagttacagtgagctatcacaccaactgaaacaatgttttctttattgtgctatatatcctgaacattcaaccattaaccgtgatgatcttactagtatgtgggtggctgaaggcttcattgatgagcagaaaggccaactactagaagatacagcagtagaatactacaatgagctgatccatcggaacctccttcaactagacctttcatattttgacctaggtgggtgcaagatgcatggtctcttaaggcagcttgtttgctatttatcaagagaagaatgttttgttggagatccagaatcacaaaatggtaatAaaatgagtaaaatgcgacgtgtttctgtggtgacagagaaggacacggtggtgttaccaagtatggataagaagcagtataaagtgaggacttacagaacttcatattccaagtcactgagagtttacaatccacttttcaagaggcttacatatctccgtgttttggatttgactggcacacttgtacagagcatcccaagtcacattggaaatttgattcatatgcgtttgattaatcttgatgggacaaacatatctcgtctcccagagtccattggtaaccttcaaaatcttcaagtactgaacctgcaaaggtgtaaatctttgtacaggcttcctttggcaaccacgaaactatgcaatttaaggcggcttggtcttcttgatacaccaataaataaggttccaaaagggataggaagactgcaattccttaatgatttggaaggatttcctattggaagtgtaacttacaataaaaaaatgcaagatggatggaatttggaagacttggctgatctttcacagttgaggtggcttgttatggtaaaactagaaagatgtactccttgcagcagtgaagattcatttctcctaacaaacaaagaacatctgaaagttctatatctagaatgcactgaaccaacaaatgaagcatgttcagatgaacatgttaaacatgttgagaatatcttcgagcagctagtccctccacagaacttgaaagatctatctgttctgagattccttggtcagaacttaccctcctggctttgtaatgtctatctgccttcactgaaatatttgatcctctctgattgcaaatcttgcatacatcttccaccaatatggcagctacccaacttggaacgcctgaaaattgtgaaagcaactgcaattaccaagatcggacccgaatttattgggcaattttcaagatccagggaagcagttgctttccccaagcttgaatggttgatcatcaatgatatgcccaactgggaggaatgggcctttactggagaagatgagatatcacttgcagcaatgaaggaaggaggaggggatggaactgctgtggccgaagaggaggagatatcacttgcagcaatgaatgaaggaggagaggatggaaccactgtgacggaaaagggggaagcctcatttccaaggttgtgtgtgctgccctctttgaagaggttggacattgataactgccccaagctgagggctctcccacaacagcttggacacgaggccaccagtttgaaagagctctcccttgtagcagcaagctgcttgaagtcggtgaaggaccttccatccctatctggtttcctttctgtttgtagatgtgaaggcctggagagggttacagaacttcccaaagtgagaaagctatttgtaagtgtttgtccaaatttgagctgtgttgaggagttaggcagtttggagcagctatggttggatgtgaatatggaggactcatcaccgtgggtgcatgggcttcgagagcagtaccgccacctggatgtctacacgtggcctagagagtga
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| Protein seq | MAAVLDALIVSCIKKLQFIITDKAILILGVEDELEELQRRTDVIRSSLQDAEARRMEDSAVEKWLDQLRDVMYDVDDIIDLARFKGSILLADHPPSSSSKPTRCNCPSCHCNIWTRHEVAVKIRSLNKKIANISNDEVLQDLRRRPHPRNGSIWTPIKTSSIVEPNLVGEEVILACRELVDLVIENKEKKDYKLGIVGTGGVGKTTLAQQIYNDEKITGNFDKHAWVCVSTDSTQTSLLEEVLRIMKIRYGKAKSVEELQNKLKSAIKEKSFFLVLDDVWESNAWTNSLQKPLHAAAKGIVIVTTRNEKVAQEIKVDHTHQVHLMSENVGWDLLWKSMGITEEKQVHHLRDIGIEIVHQCGYLPLAIKIIAKVLISKEKTNDEWKRILSNNSWYMNNLPDELRALYLSYSELSHQLKQCFLYCAIYPEHSTINRDDLTSMWVAEGFIDEQKGQLLEDTAVEYYNELIHRNLLQLDLSYFDLGGCKMHGLLRQLVCYLSREECFVGDPESQNGNKMSKMRRVSVVTEKDTVVLPSMDKKQYKVRTYRTSYSKSLRVYNPLFKRLTYLRVLDLTGTLVQSIPSHIGNLIHMRLINLDGTNISRLPESIGNLQNLQVLNLQRCKSLYRLPLATTKLCNLRRLGLLDTPINKVPKGIGRLQFLNDLEGFPIGSVTYNKKMQDGWNLEDLADLSQLRWLVMVKLERCTPCSSEDSFLLTNKEHLKVLYLECTEPTNEACSDEHVKHVENIFEQLVPPQNLKDLSVLRFLGQNLPSWLCNVYLPSLKYLILSDCKSCIHLPPIWQLPNLERLKIVKATAITKIGPEFIGQFSRSREAVAFPKLEWLIINDMPNWEEWAFTGEDEISLAAMKEGGGDGTAVAEEEEISLAAMNEGGEDGTTVTEKGEASFPRLCVLPSLKRLDIDNCPKLRALPQQLGHEATSLKELSLVAASCLKSVKDLPSLSGFLSVCRCEGLERVTELPKVRKLFVSVCPNLSCVEELGSLEQLWLDVNMEDSSPWVHGLREQYRHLDVYTWPRE |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0023770 | OsNaBo_11g0023770.01 | Chr11 | 29561512 | 29572284 | + | NAM | ||
| CDS seq | atggcagcggtattagatgctttgattgtctcatgcatcaagaagttgcagtttatcattacagacaaggcaatactcattttaggggtagaagatgaacttgaagaactgcagcgaagaacagacgtcataagatcttctcttcaggatgctgaggcaaggaggatggaagattcagcagttgaaaaatggcttgaccagctaagagatgttatgtatgatgtcgatgatattattgatttggctagatttaaaggaagcatcctactagctgaccatcctccatcatcatcaagcaaaccaacacgttgcaattgcccttcgtgtcattgtaatatttggacacgtcatgaggttgctgttaagattagaagcctgaacaaaaagatagcgaacatttcaaatgatgaagtacttcaagatctcagacgtagaccgcatccgagaaatggttcgatatggacaccgataaaaacctccagcatagttgaacccaaccttgtgggtgaagaggtcatacttgcttgcagagaattggtggatttggttattgaaaataaggaaaagaaggattacaagcttggtattgtagggacaggaggagttggcaagacaacacttgctcagcaaatatataatgatgaaaaaataacagggaatttcgataaacatgcatgggtttgtgtttcaacagacagcacacaaacttctctattggaagaagttcttcggatcatgaaaattcgatatgggaaagcaaaatcagttgaagagctccAaaacaagctcaaatcagccattaaagagaagagttttttccttgtgctagatgatgtatgggaatctaatgcgtggactaattcacttcaaaaaccattgcatgctgcagccaaggggatagttatagtaactacgagaaatgaaaaagtagctcaggaaattaaagtggaccatacccatcaagttcatttgatgtcagaaaatgtaggatgggatctactttggaagagcatgggcataaccgaagagaaacaagttcatcatctgcgggacatagggattgagattgttcaccaatgtggttatctcccactagcaataaagatcatcgccaaagttttaattagcaaagagaaaacaaatgatgaatggaaaaggatattgagcaacaattcgtggtacatgaataatcttcctgatgaactaagagctttatatctgagttacagtgagctatcacaccaactgaaacaatgttttctttattgtgctatatatcctgaacattcaaccattaaccgtgatgatcttactagtatgtgggtggctgaaggcttcattgatgagcagaaaggccaactactagaagatacagcagtagaatactacaatgagctgatccatcggaacctccttcaactagacctttcatattttgacctaggtgggtgcaagatgcatggtctcttaaggcagcttgtttgctatttatcaagagaagaatgttttgttggagatccagaatcacaaaatggtaatAaaatgagtaaaatgcgacgtgtttctgtggtgacagagaaggacacggtggtgttaccaagtatggataagaagcagtataaagtgaggacttacagaacttcatattccaagtcactgagagtttacaatccacttttcaagaggcttacatatctccgtgttttggatttgactggcacacttgtacagagcatcccaagtcacattggaaatttgattcatatgcgtttgattaatcttgatgggacaaacatatctcgtctcccagagtccattggtaaccttcaaaatcttcaagtactgaacctgcaaaggtgtaaatctttgtacaggcttcctttggcaaccacgaaactatgcaatttaaggcggcttggtcttcttgatacaccaataaataaggttccaaaagggataggaagactgcaattccttaatgatttggaaggatttcctattggaagtgtaacttacaataaaaaaatgcaagatggatggaatttggaagacttggctgatctttcacagttgaggtggcttgttatggtaaaactagaaagatgtactccttgcagcagtgaagattcatttctcctaacaaacaaagaacatctgaaagttctatatctagaatgcactgaaccaacaaatgaagcatgttcagatgaacatgttaaacatgttgagaatatcttcgagcagctagtccctccacagaacttgaaagatctatctgttctgagattccttggtcagaacttaccctcctggctttgtaatgtctatctgccttcactgaaatatttgatcctctctgattgcaaatcttgcatacatcttccaccaatatggcagctacccaacttggaacgcctgaaaattgtgaaagcaactgcaattaccaagatcggacccgaatttattgggcaattttcaagatccagggaagcagttgctttccccaagcttgaatggttgatcatcaatgatatgcccaactgggaggaatgggcctttactggagaagatgagatatcacttgcagcaatgaaggaaggaggaggggatggaactgctgtggccgaagaggaggagatatcacttgcagcaatgaatgaaggaggagaggatggaaccactgtgacggaaaagggggaagcctcatttccaaggttgtgtgtgctgccctctttgaagaggttggacattgataactgccccaagctgagggctctcccacaacagcttggacacgaggccaccagtttgaaagagctctcccttgtagcagcaagctgcttgaagtcggtgaaggaccttccatccctatctggtttcctttctgtttgtagatgtgaaggcctggagagggttacagaacttcccaaagtgagaaagctatttgtaagtgtttgtccaaatttgagctgtgttgaggagttaggcagtttggagcagctatggttggatgtgaatatggaggactcatcaccgtgggtgcatgggcttcgagagcagtaccgccacctggatgtctacacgtggcctagagagtga
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| Protein seq | MAAVLDALIVSCIKKLQFIITDKAILILGVEDELEELQRRTDVIRSSLQDAEARRMEDSAVEKWLDQLRDVMYDVDDIIDLARFKGSILLADHPPSSSSKPTRCNCPSCHCNIWTRHEVAVKIRSLNKKIANISNDEVLQDLRRRPHPRNGSIWTPIKTSSIVEPNLVGEEVILACRELVDLVIENKEKKDYKLGIVGTGGVGKTTLAQQIYNDEKITGNFDKHAWVCVSTDSTQTSLLEEVLRIMKIRYGKAKSVEELQNKLKSAIKEKSFFLVLDDVWESNAWTNSLQKPLHAAAKGIVIVTTRNEKVAQEIKVDHTHQVHLMSENVGWDLLWKSMGITEEKQVHHLRDIGIEIVHQCGYLPLAIKIIAKVLISKEKTNDEWKRILSNNSWYMNNLPDELRALYLSYSELSHQLKQCFLYCAIYPEHSTINRDDLTSMWVAEGFIDEQKGQLLEDTAVEYYNELIHRNLLQLDLSYFDLGGCKMHGLLRQLVCYLSREECFVGDPESQNGNKMSKMRRVSVVTEKDTVVLPSMDKKQYKVRTYRTSYSKSLRVYNPLFKRLTYLRVLDLTGTLVQSIPSHIGNLIHMRLINLDGTNISRLPESIGNLQNLQVLNLQRCKSLYRLPLATTKLCNLRRLGLLDTPINKVPKGIGRLQFLNDLEGFPIGSVTYNKKMQDGWNLEDLADLSQLRWLVMVKLERCTPCSSEDSFLLTNKEHLKVLYLECTEPTNEACSDEHVKHVENIFEQLVPPQNLKDLSVLRFLGQNLPSWLCNVYLPSLKYLILSDCKSCIHLPPIWQLPNLERLKIVKATAITKIGPEFIGQFSRSREAVAFPKLEWLIINDMPNWEEWAFTGEDEISLAAMKEGGGDGTAVAEEEEISLAAMNEGGEDGTTVTEKGEASFPRLCVLPSLKRLDIDNCPKLRALPQQLGHEATSLKELSLVAASCLKSVKDLPSLSGFLSVCRCEGLERVTELPKVRKLFVSVCPNLSCVEELGSLEQLWLDVNMEDSSPWVHGLREQYRHLDVYTWPRE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0023770 | OsNaBo_11g0023770.02 | Chr11 | 29564560 | 29564778 | + | IsoSeq | ||
| CDS seq | ttcgagagcagtaccgccacctggatgtctacacgtggcctagagagtgag |
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| Protein seq | FESSTATWMSTRGLESE |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.450534 | 236.263718 | 0.217790 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0676500 | RBH | 0.0 | 0.000000 | 3.153747 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45130 | RBH | 0.0 | 0.000000 | 0.139361 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0676500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023840 | SBH | 0.069281 | 0.000000 | 1.847165 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023530 | SBH | 0.000000 | 2.995102 | 0.126475 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023180 | SBH | 0.033781 | 12.385487 | 0.134590 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023030 | SBH | 0.081510 | 0.111143 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023620 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0410200 | SBH | 0.016715 | 0.3187185 | 0.003874 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023950 | SBH | 0.170500 | 0.197489 | 0.487290 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430900 | RBH | 0.8587925 | 169.4659275 | 0.384886 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023750 | RBH | 0.067782 | 1.569802 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022320 | SBH | 0.694426 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022970 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023290 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023340 | RBH | 0.478029 | 16.708927 | 1.419603 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023750 | SBH | 0.152510 | 4.768662 | 0.673288 |
