Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0298700 | OGI:01011440 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:20197123-20200458 | ||||||||
| Gene Symbol | DLN238, OsDLN238, - | ||||||||||
| DNA seq | ATGGCTGCCGGGTTTGGTCTTGATGCTGGATAGGATAGTTGAGATCCATGGAGTCAGAACCAAACTAAAATTAAGAGAACACAAGCATGAATTAGGACATGTTCCACAGTAAACTTCAGTTACAAACCAATTGGTATAGGGCACAATCCATATGAAAAACAAATATATGCACAAGGGATAAATAATGAAAAACAAGTTCAGAAACTAAAAAACAACCCACCAAACCAATTTCACATTCATATATGCTCAAAAGTAGAAATTTACATTGCATTTGCACTAAAATTACATTTGTAAAAACAATACATATGGCATGTAAGTGCATTGTAATTTTAGTACAATTACACTGTAATTTTGGGTAACATAATTTTTTGCATTATTGAAGTGTAATTGATAAAATGATGCTTGATTAGTAATCTATCATACAGAACACCTGCATATTTCACTCCTCAATACTAGGTATTCACTCATTTAAGACAAATGGCTGGATAAAATTTTAGTGATTTCCAATTTGGAACTAGCAAAACAGATTCATAGTTCTCTATATATTTGGCTTAGAATATAGACCATAGATCACATTTAATACTCTCATACAGAACATTCAGGAATTATATAGGAGCAGGACCCTCCAATAATCCATTCAAATCAAATCTAGGATTAAAAGAATATCACTCCAAGAACATCATAGTAAACAATCTAGGGTACTCAATATCTTGGAAATGTGTGATGACTCGATCTGCCATATAAACAATCTTAGTACATGCAGAGCCCGATCCACAATATTTTAGTACTTATTTAACTAATACAACTACAAGTATATATGCATTATGCAACAGTTACATCATCATTGAGAATCATTTATGCACATCAAATCTATATCTCTAGATCAGGATAGATTCATTAGATCAACATGACTAGATGATACACATGGAATACAAAAATTACTGTCCTACATAACTAAAATTACATTTGTAAATTCAGGTCATTGTGTATGTAAGTGTACTGTAATTTTTATACATTTGTTGTGTAAGTTATAATGTATTACTCTATGATGTATTGCTGTATTCTAATACATTCAATAAAATTTTGCAGAAATGAAGTCATATGCAGATCCTGTCAAAATTAGCATCAGGCAGAAAAAGGAATCTGGGGAGACAAACAAGGAAAAACTACAATTAGGTATTTTCTTTTAAAAAAATCACATACTATGTTGATCTGAACATCATGTAGAAATTTAAAAAAATATCACAGTACAACTTTGAAAAAAAAATCACAGGAAAATGTTCAGCTGCAGGGTGAAGGATGCAAAATATTAAAAAATACATTAAGGGTTAAACACTACTACTTTCACACCATTGTTATCAAAACTAGAAAAGGGTTAAACACTCAAAACACATTAACATAGCACCCAATCTTAAATAGCACTATCCATGCTGCCATACATATGCAAAATCAAACACTGGAAGTAGAAATTACAGTGATTTGAAATTAAAATTAAAATTAGAAATTACAGTTGTAAAAACAATTTATATTGCGTGTAACTTCACTGTAATTTTTGTGAATAAGCTATGTAAATAAATATGTAATACTTAACATTCTAGTAAGATGGTTTCAGTGGACATGTATACTAATTTATTCCATGAATTTTGCAGGAATGAAATTTACTGAACCAGTCAAGGTTGGATCCATGGAGAAAAAAGGTATTGAAACACTACACTACTTATTCAAGTACAAAACATCTCACAATTTCAAAAACTTCAACTACATAGCCAAATATAATAATCACATATATACCACTCCTTTCACTTGCCACTCAATACCAAACACACAGAAATACAATCACATATGTGCCTAAATACAGAAATTTTAAAAATATATGCAAAACCATTCTAGGCTAACAATCATAATTTGACCTAAATATTATGGCCAAAAATTACAGTGCTTTATATCTAAAATTACATTTGTAAGTTCAGTTGATACAACATGTAATAAATCCAAAAAGTATAAAACTTACAGTGATTTATAACTAAAATTACAATTGTAAAAACAGTTTATATGACAAGTAAGTGCACTACAAATGTGGTTCAGTTTATAACTAAAATTACAACAATTTATGACTAAAATTACATTTGTAAATTCAGTTTATTTGTCATGTAAGTACACTATAATTTTGGTATAATTGAAGTGTAACATGTATGTGTATTGTAATTTTGGTGCAACCACAATGTATTTGAAAAATATATTCATGTTTGACATAAAACATGCAAATGCCACACTGAACATATACTGCTAAAGCTCAATACATGCTAAAAAATACAAATGATTCTCAAAAGACATACCTATTTAACAAATCAGTACCTCATATACTTCATTTCTCCCATGGCACAGGTCGTGAAGCAATACAAGAAGGAGAAACAATTAGACAACAATCAGAGGAGAGCAAAAATGATGCAATGCAGATTGAAGGAAGCAAAAGAAACATCAACATGGCTCCAGGTCAAAAAATATATTTGAATAAATTTTGCTCTAAGAATAAATAAAGGTAACTACAATTATGTTTGTTGATTCTAAACTATGCTCTAATGATTTATATAAATTTTACAGGGAGGCTGGCATATGCAGGAAGTCCTAATATCTACAATTTGCAGGAGGGTGAAGGAAGCAGCAGCAAAATGCCCCATTTAGGTACTAACTAAGTTTCTAAACTACCAGGTCGACAAGCTCCAACAAAACAATTGCAACATACACTGATCTAATATTCTGATCTTTATCTTTTTCAAAATGCAGGATGCAGGAAAATACAACACGTAGGAAAAAACTTCAATTCACCAGAATTAAGCAATACCATAGGAACAATTGCATCAGAAGTTGTCAATTATGGAGGACAAATGCTATATGATCAATTCACATTGCTAAACTCAGACCCAGGACAGGTATACTAATCAAAAAGCATAGATGTAGCATATAAAACTATTTTATACATGCAGTTATAAACTAATAAACATATAACTGTGCAGGAAGGACAGTTGAGCTACACTAACCTCATGCACCAAATAATTCATAGTCCAACTGTCACCATACAGCAACAAACAGTAAGCATATCAACTTACATTATATACCTAACAAAAAAAAAGAGAAAATAATAAATGAACTGATATGTAAACTATGAATATGCAGGGAGGACAAGAAAGCTTTACAAGTCTACTTCGGACACCAGCATTTGATGTAAGAATAAAAATTTATGAATACTTATGTAACAATTCCCTAATTAGTCATTTAAATCAGTACTAACTACTGTTTTTTGATATTGCAGAATTCAATGATCTTAACAACCAGTAG
More
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| CDS seq | ATGGCTGCCGGGTTTGAAATGAAGTCATATGCAGATCCTGTCAAAATTAGCATCAGGCAGAAAAAGGAATCTGGGGAGACAAACAAGGAAAAACTACAATTAGGAATGAAATTTACTGAACCAGTCAAGGTTGGATCCATGGAGAAAAAAGGTCGTGAAGCAATACAAGAAGGAGAAACAATTAGACAACAATCAGAGGAGAGCAAAAATGATGCAATGCAGATTGAAGGAAGCAAAAGAAACATCAACATGGCTCCAGGGAGGCTGGCATATGCAGGAAGTCCTAATATCTACAATTTGCAGGAGGGTGAAGGAAGCAGCAGCAAAATGCCCCATTTAGAATTCAATGATCTTAACAACCAGTAG |
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| Protein seq | MAAGFEMKSYADPVKISIRQKKESGETNKEKLQLGMKFTEPVKVGSMEKKGREAIQEGETIRQQSEESKNDAMQIEGSKRNINMAPGRLAYAGSPNIYNLQEGEGSSSKMPHLEFNDLNNQ |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0298700 | OsMH63_10T0298700-mRNA-1 | Chr10 | 20197123 | 20200458 | + | maker | ||
| CDS seq | ATGGCTGCCGGGTTTGAAATGAAGTCATATGCAGATCCTGTCAAAATTAGCATCAGGCAGAAAAAGGAATCTGGGGAGACAAACAAGGAAAAACTACAATTAGGAATGAAATTTACTGAACCAGTCAAGGTTGGATCCATGGAGAAAAAAGGTCGTGAAGCAATACAAGAAGGAGAAACAATTAGACAACAATCAGAGGAGAGCAAAAATGATGCAATGCAGATTGAAGGAAGCAAAAGAAACATCAACATGGCTCCAGGGAGGCTGGCATATGCAGGAAGTCCTAATATCTACAATTTGCAGGAGGGTGAAGGAAGCAGCAGCAAAATGCCCCATTTAGAATTCAATGATCTTAACAACCAGTAG
More
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| Protein seq | MAAGFEMKSYADPVKISIRQKKESGETNKEKLQLGMKFTEPVKVGSMEKKGREAIQEGETIRQQSEESKNDAMQIEGSKRNINMAPGRLAYAGSPNIYNLQEGEGSSSKMPHLEFNDLNNQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.020497 | 0 | 0.015395 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0021890 | SBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0021970 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022340 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006110 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0014830 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0364500 | SBH | 0 | 0.0523985 | 0.004156 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0014760 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0321600 | RBH | 0.0060505 | 0.0055725 | 0.0039805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0014480 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0014390 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0014820 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0014500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0015070 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0020080 | SBH | 0.0 | 0.0 | 0.0 |
