Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_09G0177000 | OGI:09029920 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr09:11160259-11164271 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CACCAACTCAAAATGAAACTTTCACTATAACAAAAAGGGCATTACAAGGACTTTCATTATAACAAAAAGGACATTACAAGGTGTACAATTAGTTCTTAATGTATGCACTCTGCGGTACGATATTAAATACTTTTTATGGTCCTTCAAAATGCTTGCATTGTAACTAGTGTTGGTGCCTCCATTTTAGATATGCTGGCAAACCAAAGATAATGATAAATGGCCAAAATGGACGAAGAAACTGTCCAATGATCTTCGAGCGTAGAATCCACCATATCTTAAATCCAATCCTTACATGTAAGAACATTGCGAGCTTAATCTGGGTAACAACCTCCACGTGTCCGTACAATAAGCCGATGGAACACATGACGCACACGATCAAGGCAGTCCAGTGAGAAACTGGGTCCAGCACAACATACAAACCTAGCGCAAAGGCAGCTAGCAAGCATCTAATTGACCGCCAGACCAGCCCGTTGGCCGAGTTGAGTTGCTGCAAGCGGATTTCGTAGTCAACTTTAGCCATCCCTGAATATACGAGGCTAAAGGTGGCTAACAAAGAGAATATGAATGCGGATGTGATGGAAAAAACGAATGCCATGAAGGCATAGCTACCGATGAATGTCGGCGTGCCTCCATTGGGGTGATCATCTGCTCTGTAACCTCCAGGCAGTGTAAAAGCGGCTGCGAATGCAACAGTTGCGATCAGCGTTGAACAGATGCCCATAACTTGCGTAGACTCCGTTATGGTTTTTGAATCCTTTTGTTCATGTGCATTTTCTCTATCATCTTTGGACCCTGAATTTCCATTCTCAGTAATCCTCTTGCAAAAGCAAACCTTCTGCTTACAATTGTCGAATCGTGGATGAGCGCAAGGGACCTTCCCATAGGCGGCAATGTATAACGATTGACGTATCCAATTTTGTTTGTTCTGTAAGAAAATAAGTATCAAGAAATGTGAGTGCGAGTTATCAAAACCATATAAACTATAAGGTTTGCTTCGGTCCAACAAAAATTATGTTGAGATACCGGTAGCTCAGTGCCAAATCGTTTTCGATCGTTGGATACCTCAAGATACTTTTTTTTTTGGACCGGAACAAATCTCGTAAACTATACACCAAACCTGTAGCAAACAGGAGAATATAATGAGAGGATTTTATACCAGTTCATGGCGAAGTCCTTGTGGTTCCCGTCTGAGTGAAATATCAAGAGGTGTTAAACCCTCGTAATTCAAACAATTAATTTCCACCTTTGGATTCATCAATAGGTGTAAAACAGCATCTAGATCCCCAGCCGCTACAGCTAGGTGTAGCGCAGTGTTCCCATCGTTGTCCTGCATATTCACAATTCTAGCTGCCAACCTTTTACTCCAGCAAACGTGTAATATGATCTCATAACTTTCCTCCTCAACAGCAACATGAAGAAAGGTCCTTCCCTGGGCATTGCGCAAGTTGACGCAATCGGGATTCTTTGTGAGAAATATCTTCACTGCGTCAAGACTATCTTCTGAGGCAGCGATATGGATTGGGAAAGATCCATTGTTATCAGGCTGATATGCCAAGGATTCGTCGGCATCCATCAATATAGCTGTCAATCTATCTTTATTATTATCTCCATTAGTCTCCCTAATAGGGAGTGACCATCCTAGAAATTTAAAGCATCTTACTATATACTTCCGAAATATGAAGATTAGCAGCTTCCGGCTATTTGAAATGTGCACATGGTCTATTGGTGCAGCAAAATGAAGAGGCGTCCGGCCATATTGGTCTCCTTCTCGAACAAGGTCCATGTTCCAACCCAAGACCTTATTGAGGCGAAATGAACAAACATCTGCATTTGGGACTTCATTAACTACATTGACCATATATTGGGTTCATATTGACCATTCACTCATATATGCTCTTATGTTGTTTATTCTAATTTTGAAGTTTATTCCTGTGTATTGACCTTAAAGATTAAAAGGTGTATTAATTCAAAATGGATATATACCATTTCAAGTATATTTCGGTTATCCCATAGTATATATATGGTATCATTTTCTCTAGTTGTACAACTTGAAACATAACAGGTGGAATAACTGCGACTTGAACTCTAGCTAATCATGTAAGTTAGATGAAATTTGCTCCGGTCCCAACAAAAAGTTTCTCGAGGTATGTTACTAAATTGTTTTCGATCGTTAGATCTAACTTGGCAGGATGGGCATTGTAAGATCCAACGACTGAAAACGATTTTGTACTTTGAGGTACCAATACATCGATGTACATTTTGTTAGACCAGAGCAAATATCAAGTTAGATATGATGTATCCACTGGCCTGCATATATATTATGCCTGAGAGACTTTTATCTTAAATCTTCGCGAGTTAGAGCCACATAAGATATATATATTTGTTAGGAGGCGACGTACTATTAATTTATTCATTGCTATGTTTGTGCAAAACATCAAGAATCGAAGGTACATATAAATTATAAATTAATTACCTATATTTTGAAGAACAGCTGCGTGCACGATATTTTGCCCTTTCGGTCCCAAGCAGGACAGATCTCGATCATTTTCATGAAGCTTCTCCGCAACTTTTATATCTTCTACCAATCTCACAGCCAGATACAACGGTGAAGCGCCGTTGCTTGGATGACGAGCTAGCTTCGGATCTACCATCATTAGCTCATCAATCATATGTTTGTTGGCAAGGCGGACTGCCTCGTGTAACACTGTCTCGTGTCGGAGATTTTCTGTCCTCAGGAGCTCCTCGACCTCCTGTTGTTGATAGCCGCCATCCCTAGCTGTAGCCAGCGTGAGGAGATGTGTGACCATGTTACCATTCCCAACTCTGGCAGCGCAGTGGAATGGCGTGTCGCCGTCGTTGTTGGTCGCCTTAAGGAGGTGCCTGGCCTTGCCGTAGATCAGCGTTGCGCAGTCCTTGAAGTTGTCGCCATCTCCGCTTGTGGCCACCACATGCAGGGCGGAGTCTCCCTGAAACGTGGTTCCCTCCAGGATCGACCTCGGATCGTCTGCACCTAGGGGTGTTAATGGATCAAGAACGATAGGTTCTTTCACAACTCTAGTCCTTATATATATACTTTGGAAATGGTTATACATAGGACCAGCCAGCTTGCACGACCTTTGTCCGACTAGTACCGTAGAGTTGCTACGTGTCTACGCCCACATGGAGAGATGTCGAGAGTACTGATCAGTAGTATGTCTCTAGTCGTATGTATAGCATGACTTATATACTTTTATGTCCAAGACAGACTAATTTTAGTTCACCCTATTTTAGATCCAACCTTTAAATTTTATCTATTCTCCTTTTAAAGATAGTAATGGTGGTGGCAGTGGATCTGCAACCCACCAAATCTGTCGTATTTTTTTTACCAACTACCTCTTTATTTACTTTAGTTTTATGAATCAATCCTTCTACATACTGTTAATATCTTATTTCATTTCTAAAAATTATTACAATTAACTTGTTCCAAACAATGTTAGCAGATGTATATAATTCATTTTTATCCATAGTAAATCATGGGTATTTAGCTAGTATAGACTAAAAAAGTTAGGCGCTTTACCACCCCCTACCTGCACCTTCAGTATCAACATTAAGGACGATGTCTTGAGTGGTCGTCGGCGCATCTCGCCGCTCATCTCTGATCTGCAGAAGATCCTTCAGCTGCTGGTAATCGGCACGTCGCGCCGCCCGTAGCAGTTTGGGGCGCATTACAACCTTGGGCTTGCGTTCGCTGTGAGCCTCACCCTTTGGCGGCTCAGGATGGACGCCCTCATTTGCCGCCTCCGATGCTGGATGCGGTGGCTTCTCTCCCTTGTCGGACGACATCCTCCTTGGTCCGAACCGATCGATGAAAACAACGGCGGCAATGCTAAGATGATCTATGTACGTACCGATGTCGTCCGTGGACACAGCTGCTAGCTACGATGGGCACAAATTAAGTACAGAGAGCTAGGGTAAAGTGGCGATGGACGGCGGTGGAGTGGTGAGGAAATCGACGGAACCTATTGTGCTGTTGG
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| CDS seq | ATGTATAACCATTTCCAAAGTATATATATAAGGACTAGAGTTGTGAAAGAACCTATCGTTCTTGATCCATTAACACCCCTAGGTGCAGACGATCCGAGGTCGATCCTGGAGGGAACCACGTTTCAGGGAGACTCCGCCCTGCATGTGGTGGCCACAAGCGGAGATGGCGACAACTTCAAGGACTGCGCAACGCTGATCTACGGCAAGGCCAGGCACCTCCTTAAGGCGACCAACAACGACGGCGACACGCCATTCCACTGCGCTGCCAGAGTTGGGAATGGTAACATGGTCACACATCTCCTCACGCTGGCTACAGCTAGGGATGGCGGCTATCAACAACAGGAGGTCGAGGAGCTCCTGAGGACAGAAAATCTCCGACACGAGACAGTGTTACACGAGGCAGTCCGCCTTGCCAACAAACATATGATTGATGAGCTAATGATGGTAGATCCGAAGCTAGCTCGTCATCCAAGCAACGGCGCTTCACCGTTGTATCTGGCTGTGAGATTGGTAGAAGATATAAAAGTTGCGGAGAAGCTTCATGAAAATGATCGAGATCTGTCCTGCTTGGGACCGAAAGGGCAAAATATCGTGCACGCAGCTGTTCTTCAAAATATAGATGTTTGTTCATTTCGCCTCAATAAGGTCTTGGGTTGGAACATGGACCTTGTTCGAGAAGGAGACCAATATGGCCGGACGCCTCTTCATTTTGCTGCACCAATAGACCATGTGCACATTTCAAATAGCCGGAAGCTGCTAATCTTCATATTTCGGAAGTATATAGTAAGATGCTTTAAATTTCTAGGATGGTCACTCCCTATTAGGGAGACTAATGGAGATAATAATAAAGATAGATTGACAGCTATATTGATGGATGCCGACGAATCCTTGGCATATCAGCCTGATAACAATGGATCTTTCCCAATCCATATCGCTGCCTCAGAAGATAGTCTTGACGCAGTGAAGATATTTCTCACAAAGAATCCCGATTGCGTCAACTTGCGCAATGCCCAGGGAAGGACCTTTCTTCATGTTGCTGTTGAGGAGGAAAGTTATGAGATCATATTACACGTTTGCTGGAGTAAAAGGTTGGCAGCTAGAATTGTGAATATGCAGGACAACGATGGGAACACTGCGCTACACCTAGCTGTAGCGGCTGGGGATCTAGATGCTGTTTTACACCTATTGATGAATCCAAAGGTGGAAATTAATTGTTTGAATTACGAGGGTTTAACACCTCTTGATATTTCACTCAGACGGGAACCACAAGGACTTCGCCATGAACTGAACAAACAAAATTGGATACGTCAATCGTTATACATTGCCGCCTATGGGAAGGTCCCTTGCGCTCATCCACGATTCGACAATTGTAAGCAGAAGGTTTGCTTTTGCAAGAGGATTACTGAGAATGGAAATTCAGGGTCCAAAGATGATAGAGAAAATGCACATGAACAAAAGGATTCAAAAACCATAACGGAGTCTACGCAAGTTATGGGCATCTGTTCAACGCTGATCGCAACTGTTGCATTCGCAGCCGCTTTTACACTGCCTGGAGGTTACAGAGCAGATGATCACCCCAATGGAGGCACGCCGACATTCATCGGTAGCTATGCCTTCATGGCATTCGTTTTTTCCATCACATCCGCATTCATATTCTCTTTGTTAGCCACCTTTAGCCTCGTATATTCAGGGATGGCTAAAGTTGACTACGAAATCCGCTTGCAGCAACTCAACTCGGCCAACGGGCTGGTCTGGCGGTCAATTAGATGCTTGCTAGCTGCCTTTGCGCTAGGTTTGTATGTTGTGCTGGACCCAGTTTCTCACTGGACTGCCTTGATCGTGTGCGTCATGTGTTCCATCGGCTTATTGTACGGACACGTGGAGGTTGTTACCCAGATTAAGCTCGCAATGTTCTTACATGTAAGGATTGGATTTAAGATATGGTGGATTCTACGCTCGAAGATCATTGGACAGTTTCTTCGTCCATTTTGGCCATTTATCATTATCTTTGGTTTGCCAGCATATCTAAAATGGAGGCACCAACACTAG
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| Protein seq | MYNHFQSIYIRTRVVKEPIVLDPLTPLGADDPRSILEGTTFQGDSALHVVATSGDGDNFKDCATLIYGKARHLLKATNNDGDTPFHCAARVGNGNMVTHLLTLATARDGGYQQQEVEELLRTENLRHETVLHEAVRLANKHMIDELMMVDPKLARHPSNGASPLYLAVRLVEDIKVAEKLHENDRDLSCLGPKGQNIVHAAVLQNIDVCSFRLNKVLGWNMDLVREGDQYGRTPLHFAAPIDHVHISNSRKLLIFIFRKYIVRCFKFLGWSLPIRETNGDNNKDRLTAILMDADESLAYQPDNNGSFPIHIAASEDSLDAVKIFLTKNPDCVNLRNAQGRTFLHVAVEEESYEIILHVCWSKRLAARIVNMQDNDGNTALHLAVAAGDLDAVLHLLMNPKVEINCLNYEGLTPLDISLRREPQGLRHELNKQNWIRQSLYIAAYGKVPCAHPRFDNCKQKVCFCKRITENGNSGSKDDRENAHEQKDSKTITESTQVMGICSTLIATVAFAAAFTLPGGYRADDHPNGGTPTFIGSYAFMAFVFSITSAFIFSLLATFSLVYSGMAKVDYEIRLQQLNSANGLVWRSIRCLLAAFALGLYVVLDPVSHWTALIVCVMCSIGLLYGHVEVVTQIKLAMFLHVRIGFKIWWILRSKIIGQFLRPFWPFIIIFGLPAYLKWRHQH |
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| Function | Ankyrin repeat-containing protein NPR4 [UniProtKB/Swiss-Prot:A2CIR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0177000 | OsMH63_09T0177000.1 | Chr09 | 11160259 | 11164271 | - | maker | ||
| CDS seq | ATGTATAACCATTTCCAAAGTATATATATAAGGACTAGAGTTGTGAAAGAACCTATCGTTCTTGATCCATTAACACCCCTAGGTGCAGACGATCCGAGGTCGATCCTGGAGGGAACCACGTTTCAGGGAGACTCCGCCCTGCATGTGGTGGCCACAAGCGGAGATGGCGACAACTTCAAGGACTGCGCAACGCTGATCTACGGCAAGGCCAGGCACCTCCTTAAGGCGACCAACAACGACGGCGACACGCCATTCCACTGCGCTGCCAGAGTTGGGAATGGTAACATGGTCACACATCTCCTCACGCTGGCTACAGCTAGGGATGGCGGCTATCAACAACAGGAGGTCGAGGAGCTCCTGAGGACAGAAAATCTCCGACACGAGACAGTGTTACACGAGGCAGTCCGCCTTGCCAACAAACATATGATTGATGAGCTAATGATGGTAGATCCGAAGCTAGCTCGTCATCCAAGCAACGGCGCTTCACCGTTGTATCTGGCTGTGAGATTGGTAGAAGATATAAAAGTTGCGGAGAAGCTTCATGAAAATGATCGAGATCTGTCCTGCTTGGGACCGAAAGGGCAAAATATCGTGCACGCAGCTGTTCTTCAAAATATAGATGTTTGTTCATTTCGCCTCAATAAGGTCTTGGGTTGGAACATGGACCTTGTTCGAGAAGGAGACCAATATGGCCGGACGCCTCTTCATTTTGCTGCACCAATAGACCATGTGCACATTTCAAATAGCCGGAAGCTGCTAATCTTCATATTTCGGAAGTATATAGTAAGATGCTTTAAATTTCTAGGATGGTCACTCCCTATTAGGGAGACTAATGGAGATAATAATAAAGATAGATTGACAGCTATATTGATGGATGCCGACGAATCCTTGGCATATCAGCCTGATAACAATGGATCTTTCCCAATCCATATCGCTGCCTCAGAAGATAGTCTTGACGCAGTGAAGATATTTCTCACAAAGAATCCCGATTGCGTCAACTTGCGCAATGCCCAGGGAAGGACCTTTCTTCATGTTGCTGTTGAGGAGGAAAGTTATGAGATCATATTACACGTTTGCTGGAGTAAAAGGTTGGCAGCTAGAATTGTGAATATGCAGGACAACGATGGGAACACTGCGCTACACCTAGCTGTAGCGGCTGGGGATCTAGATGCTGTTTTACACCTATTGATGAATCCAAAGGTGGAAATTAATTGTTTGAATTACGAGGGTTTAACACCTCTTGATATTTCACTCAGACGGGAACCACAAGGACTTCGCCATGAACTGAACAAACAAAATTGGATACGTCAATCGTTATACATTGCCGCCTATGGGAAGGTCCCTTGCGCTCATCCACGATTCGACAATTGTAAGCAGAAGGTTTGCTTTTGCAAGAGGATTACTGAGAATGGAAATTCAGGGTCCAAAGATGATAGAGAAAATGCACATGAACAAAAGGATTCAAAAACCATAACGGAGTCTACGCAAGTTATGGGCATCTGTTCAACGCTGATCGCAACTGTTGCATTCGCAGCCGCTTTTACACTGCCTGGAGGTTACAGAGCAGATGATCACCCCAATGGAGGCACGCCGACATTCATCGGTAGCTATGCCTTCATGGCATTCGTTTTTTCCATCACATCCGCATTCATATTCTCTTTGTTAGCCACCTTTAGCCTCGTATATTCAGGGATGGCTAAAGTTGACTACGAAATCCGCTTGCAGCAACTCAACTCGGCCAACGGGCTGGTCTGGCGGTCAATTAGATGCTTGCTAGCTGCCTTTGCGCTAGGTTTGTATGTTGTGCTGGACCCAGTTTCTCACTGGACTGCCTTGATCGTGTGCGTCATGTGTTCCATCGGCTTATTGTACGGACACGTGGAGGTTGTTACCCAGATTAAGCTCGCAATGTTCTTACATGTAAGGATTGGATTTAAGATATGGTGGATTCTACGCTCGAAGATCATTGGACAGTTTCTTCGTCCATTTTGGCCATTTATCATTATCTTTGGTTTGCCAGCATATCTAAAATGGAGGCACCAACACTAG
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| Protein seq | MYNHFQSIYIRTRVVKEPIVLDPLTPLGADDPRSILEGTTFQGDSALHVVATSGDGDNFKDCATLIYGKARHLLKATNNDGDTPFHCAARVGNGNMVTHLLTLATARDGGYQQQEVEELLRTENLRHETVLHEAVRLANKHMIDELMMVDPKLARHPSNGASPLYLAVRLVEDIKVAEKLHENDRDLSCLGPKGQNIVHAAVLQNIDVCSFRLNKVLGWNMDLVREGDQYGRTPLHFAAPIDHVHISNSRKLLIFIFRKYIVRCFKFLGWSLPIRETNGDNNKDRLTAILMDADESLAYQPDNNGSFPIHIAASEDSLDAVKIFLTKNPDCVNLRNAQGRTFLHVAVEEESYEIILHVCWSKRLAARIVNMQDNDGNTALHLAVAAGDLDAVLHLLMNPKVEINCLNYEGLTPLDISLRREPQGLRHELNKQNWIRQSLYIAAYGKVPCAHPRFDNCKQKVCFCKRITENGNSGSKDDRENAHEQKDSKTITESTQVMGICSTLIATVAFAAAFTLPGGYRADDHPNGGTPTFIGSYAFMAFVFSITSAFIFSLLATFSLVYSGMAKVDYEIRLQQLNSANGLVWRSIRCLLAAFALGLYVVLDPVSHWTALIVCVMCSIGLLYGHVEVVTQIKLAMFLHVRIGFKIWWILRSKIIGQFLRPFWPFIIIFGLPAYLKWRHQH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.800523 | 0.003 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0337300 | SBH | 0.256360 | 0.882954 | 1.299679 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g16760 | SBH | 0.129419 | 0.230236 | 0.181411 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0337300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0005950 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0006000 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0006470 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0006040 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0006190 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0175400 | SBH | 0.427968 | 0.7971435 | 0.0741595 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0006350 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0158000 | SBH | 0.9564085 | 4.190374 | 0.322035 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006390 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0006020 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006010 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006160 | SBH | 0.170946 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0005980 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G006570 | SBH | 0.011180 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0006160 | RBH | 0.0 | 4.720008 | 0.0 |
