Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0427000 | OGI:08076520 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:28689388-28695226 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATTTCAACCAAAATCTAAACTTTGTGCTAAACTAGACACAGCCTAAGGAGAGAATCCAGTACGGCGTGCAGTGGCAGCGTCACGTCGCGTACACGACGACACGACTCACGCCATCGGATTCTTCTCTTCTGGACTTGCCCACCTTTGCTTTCATTGGTCCAGTAGTACTCCAGTCTCTTCTCTATCCATTGGATACTTCAGGAGAATGGAAGCTAGTCCTAGTCCGGTCACTGATGCCAAATAGAGTACCACCAGCAGCAGAACATTCTCAGACACACGTTATCATCAGTACTGTACTATTACATCTCACTGCTGATAATAATCCACTGGGTGAAATTCAACCATGCTGTCCTTACGAGTACAAGTATGTCGGGTAGGAGGAGTAATTGTTTCAGAAATGGAATCCAAATGGTCACAAGAGTTCTGAACCATTAACTTTTAGCTTAGTTTGTAATTTGGAGCATATGTTAGTTAAATATACCCTCTGATGACTGTATCAAACTACCACCAAAATGTTTCTGCGTTTGTTCAGGTCACAAGCAAATTAATATACAGGACGAACACGGATTCAGGGTTCAGTTGGTGGATCCCTGGGTTCTGTGCGGCTAGGTTGTTCCAGGTAAAGCTGCATCTTCACAGGATCACAGCTCATGGACTTGATTGGGGTTATCTGTGGAGGCTGCATCCACTGTTTGGTGTCTGTAGGGATCCACAGCTGAGCTTCCTTCTCACCATCTGGAGGGAGGGATCGGAAGTATGCAGCGATCTCCCAGCTGCCATCTATCACCAATTCAGAATGCAAGCATCTCTTGAGAGATCTTCTAGTAGCATGGTTCCCCTTTCTAGCAAAATATGGAGATAGTATGGAAAAATAAGGGTGATGTAGATTGAGTACCTGATGGAAGGGTTCTAGTAAGGGGTTCAGCAACAGCCAGTTTGATCAAGAAAGCTCGCAGAGCGAATTCCAGGCTGGCCTCCTCTATCTTGGAGCCATAAGATTGGTTAACTGCAAGCTTGAACACAAACTTCTCAACTGGCACATGCGCTTTGTCGTAGAAGATGACTACAACCCTCTCAACCAATCCCTGGATTGTTGTGAGAAAATTATGGTTATTCACTAGTTGGAAAAGAAAAAGAATCAGCACAAATTATTTCTAAAATGCTCTTCACATGAACGCCAAGAGACTGTTCGATACTGTAACTCAGGTTTGAAATAAGCTCACAAAATTGTTGCCATACTTCCCTCCGCACATGACAGAAACTAGACCAAACTCCAAGCATATGCATAATGAGTTAAGGTAGAACTATGAGATCCATACATTAGCAAGTTTCCCTATTATTCTCATAAATTGCAATGAGTTGTGATAACCAATCAGCCAATGCGATATAAAAAGGTATAATCAACACCACCACAGTGTGCACAAGGAAAATCTCAAGTCTGTCAGACAGGATACATAGTATACTGCATAATTGCGTTTGCATTAACCAAAATGAATTCAATATTTAGGGAATGCCTAAATCTTCCCATGTTGTACCCGCATGACCACAACCTAGAAATAAGCTAGTTCAGGAAATGCAACAACGAGGAACAATTATTTAGAGGAGGAACCTTCTGAATGAAAGGGAGTAGGCCAGAAGTAGCAGAGTGGATATAACCGGCAAGTTGGGGGTGCACTGCTTTCTGGACCACTACATTCATATACCTTCTCCTCTCAAATGCACCTACAGATAGTCAGATACATTATGTTTAATCGAACTGTGCCTTTACAGATAGCAAATATTGACAAACAAGCTGAAATAAGTACAAAATAGGAGTAATTCTTACGAGGAGGATAGAAGCCTTTGAGGAAGACAACACAACTGACAGCTACCTCTAGAAAATCCACAATCACTTGTGCTATTTGACCTATTAAGCCAACCAAGCTTTTAGCAGAGAGGACAAAAGGCATTCCTTAAAAAAATCAACCTAACTTCAGGAACCACTGGTATAACTATTTGTAAGCATTTGTGCTTTTTACCTTGTGGAGTTTGATTTTTCCTGTCCATATGGTTCAGTTCAGGCGAATTCTGGTTTGTCACAAACTTCTATTGATTTATGCCCCTATGATTGGCATAATCCACCAGCCAGAGGGCATATTTGAAACTGCACCAGATGATTCAAAGCATAGAAAGAAGAGTTCAATTCTAAATCAAAAGATCATTAGATAAAGAGCAAATGAAAAGGAACAAGCAAATGGCAATAGCTATATTGAGTGTTTGTATACGATGAGAGCTTGCTAGTTTCATTTAGCCCTTGCAGCACATCAGACTCCCAGTCAACAATAATGACTATTATGTAGGGCCTACCATATTTTGCAAAACATGAAACATGAAAAAATGACATTCACACTTCTCACCGATAGTAGTAGAACGAAACTATGGCCAACATATCATCTTATCAGTCAAGTGAGTATACATGAAATGGTTTTGCAAGGCAAGATTCAAAAAACTGGAAGGACAACACAAGTCGCAGAGCTGAGATTCATCTCGCCAATCACTGTAAAAAACAGATATCCCTAACTCTCTGTTTAATGGTTAGTAAGAATACATGATTGAGGAACAGCTACAGAGTTGCCTACTACAAATAACTGTTCCGCTAACTAGTTTTCACTTCTCATTGAAACACCTTTAGTAATTGTAGGTGATAGTAAACTATACACAAAAAAGGGAGTAAATGCAAATGCGATATCCTGGGGCTACATTATGAAAAGGAAATATTTTCAGAAATTGTGGCCAACAGAACCACATTAAGTATATTCCCTTCAGTGGTAGTTGCAACACTGTAAAGAACCTGGAAAAGGAAAAATTCTCAACTTGGAGGGAAATGCAAAAGTAAAGACAAATTTTCAATTTCATCATTCCATAAGCTGATAAAAAAAAAACCACAGCATTGTACATTTGAAATGGATATATTTGGTTGATATGGAACTCCTAAGCTTTTACATTAGGAAGGACTCCGCCACTAGTAGCTCATTGATCCCAAAAAGAGTGTTGCATATAGCTTCTGTCTCAAAATGAGACTCATCTCCCGCAAAGAATTCATGTATGCAGCCATCGACTTCAATGAAAGAGCAACCGGGCTTCTTACTTGTCCTACTATTGCCCATCCCTGTCCGCACATTATTCACATCAGCCCATCTTGATGTGGTAGCATATACATTAGAGAGTAAAACATGCCCTCCACACCTTTGTGGTTCCAACTGTTCAATTCTTTCTGCTGCATATTCTGCAAGCCCCACTTGTCCAGAAGCTCTACAGGCAAACAACAATGACCGCCATACTACCACATCAGGAGCGACAGGCATATCTTTAATGAATTGCTCTGCCTCTGCCAACAGCTTGGCACGTCCCAAAAGGTCGACCATGCATCCATAGTGTTCGATTCTTGGCACAAGGTTGTAGACCTTGGACATGCGATGGAAGTGATGGTACCCCTGTTCCACTAAACCTCCATGGCTGCAAGCAGTTAGCACACCCAAAAAAATGACCTCATTCGGCATAACCTTATCTTCTCCTTCCATCTGTGCAAACAAATCTAGTGCCTCAACGCAGAGACCATTCATAGCAAAGCCCATTATCATTACTGTCCAAGTAAACACATCCCGCTTTGTCAATCCACGAAATATCTGATAGGCCTTGTTTACATCCCCGCACTTCGAGTACATATCAATCAACGAATTTTTCACAGAAAGCTCTTTCCCTAAACCATGACCATCACAATAAGCATGGAGATACCGTCCCAAGTCAAGTGCTCCCATCTGGCCACATGATGATACAACAGTAGCAATTGTAGCGTCATCAGCCTTCACACCAGCAATTTGCATGTCCCTAAACAGATCAACAGCCTCTTTAAACCTACCAGATTGTGTACATCCAGCAATCATTGAGGTCCAGCAAACTACATTCCTTTCAGGCATTCTATTAAAAACCCTGTGAGCTTCCTCAACCATACCACACTTTGCATACATACTAACCAAAGAGGATCCAATATAACAATTTATCTCAAACCCATTCAGCACAACTAGAGCATGACAAAGGCTCCCAACCTTCATTGCGCCTGTCCTTGCACAAGCAACCAGCACATTTAACAGAGTGACCTCGTCCAGCCTAACTTGCTCTTTGGCCATTTGGTGAAAAGATTGCAACGCCTTATTAGGCATACCACCTCGTATGTATCCAGCAATGATTGTGTTCCAAGAAACTACATCAGAGGCCCATCGTGGAGCAGAATCAAGAACTAACCTTGCAGAAGCTGGATAATTACAAGATGAGTACATGTTGATAAGGGCATTAAGGACAAATGAATCTGAAGCTAGGCTGAGTTTCAAAGAAAGGGCATGAAACTGGGAGCCAACATCAAGTGATGGGACGCGAGCAGCAGCAGAGATGGCAATGTTGAGGGAGTAGTTATCAAGTGTCATGTTGGCAAAACGGCGAAGTAGGGAGAGGAAGGAGAAAGAGAGTGATGGGGTAGGCCCCAAAGAGAGGGAACGGAGGACAGAGTGGACCAGCGGTAGCTTAAGGAGAAGACCCGAGACGGTTGCTCGGGAGAGGAGAATGGGGAGATGATGGTGTGAGAGAGATGAGACCGGGACAGAGAGGATACATTTGTTTTCAGTGTGCGAGCTTCTGAGAGTGGAGAAATATCGTGTCTTCCCATTGAGAATCCGAGAAGATAAGCACATTTAAACACTCTAAATGGAGCTGATTTGAGGGCAACAGAATGGGGGCAGTGGTGTTATACTGCAGCTAAGATATTATTGGGATATCGTAAACTGTTGTCCGACATCAAAACCTACATGGAAAAGGAACCTGCCATAAGAGATAATTTCTTGTGTATGGGCTTGTCACTTATGTACAAGAATGAAGAAGAAATTATGCAGCTTGGAATGATCTTTGATAAACAAATATTGTAATTTGTATTGGTGAAGTAACATTCTAGCAATACAAAGACCCCCAATATGCATATGCCGGCCAGCTCAAGGGAGTCAGCGGGTATTCTGTTTGCATCCTTGAATCCTTGGTCTTCCATTATATTTGAAGAAAGTTAAATAAAACAAAACTATCAAGGTAATGAGGATTCAGCAGAAGCCTAATTATTTTATATACTCCCTCCTTCCCTAAATGTTTAACGCTGTTGACTTTTTAAAATATGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATGTGTAAAGCTATATGTATACATAAAAGTATATTTAACAATAAATCAAATGATAGGAAAAGAATTAATAATTACCTAAATTTTTTGAATAATACGAACGGTCAAACATTTTTAAAAAAGTCAACAGCGTCAAACATTTTGGGATAGAGGGAGTATTATTTATTTAGTTTGGAAACACACATGCTATTTGTACTAACAGCATCACCACGCACCAATGAAATCCAACAGAAACTAGATGTGTGCGCTGGAGGGAACGAGATTAAGGGAACCAGTCCAAGTTCGGACGGATTTCCAATCTATGTCACGCCGCCTCATCAGTCATCAAGCGCGCGCGGAGGAGGGAGGTGGCTACGAGAGAAGAGAAAACAATAATGAATACCTTGCAGACGGAGGAGGAGGTCGACCGGCCGCGTCACGTCAACCCCTCGCCGGCCCGGCCGTGCGCGGGAGGGGGGCAGGCCGCACAGAGGAGGAGGAGGAGGATAGGGCGGGGTCGCGATGCGGGGAGGCGGCTCGTCGTCCTTGTCGCCGGCGGCGCGCTCTCCGGGGAACCTCTTGCTTTTGTGGAAGGAAGAAGAAGACCATCTGGTGGCTGGGCCGGCTCAGGTTC
More
|
||||||||||
| CDS seq | ATGTGCTTATCTTCTCGGATTCTCAATGGGAAGACACGATATTTCTCCACTCTCAGAAGCTCGCACACTGAAAACAAATGTATCCTCTCTGTCCCGGTCTCATCTCTCTCACACCATCATCTCCCCATTCTCCTCTCCCGAGCAACCGTCTCGGGTCTTCTCCTTAAGCTACCGCTGGTCCACTCTGTCCTCCGTTCCCTCTCTTTGGGGCCTACCCCATCACTCTCTTTCTCCTTCCTCTCCCTACTTCGCCGTTTTGCCAACATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCTGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGATGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCACAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCACAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGCTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTAAGAAGCCCGGTTGCTCTTTCATTGAAGTCGATGGCTGCATACATGAATTCTTTGCGGGAGATGAGTCTCATTTTGAGACAGAAGCTATATGCAACACTCTTTTTGGGATCAATGAGCTACTAGTGGCGGAGTCCTTCCTAATTTTACTATCACCTACAATTACTAAAGGTCAAATAGCACAAGTGATTGTGGATTTTCTAGAGGTAGCTGTCAGTTGTGTTGTCTTCCTCAAAGGCTTCTATCCTCCTCGTGCATTTGAGAGGAGAAGGTATATGAATGTAGTGGTCCAGAAAGCAGTGCACCCCCAACTTGCCGGTTATATCCACTCTGCTACTTCTGGCCTACTCCCTTTCATTCAGAAGGGATTGGTTGAGAGGGTTGTAGTCATCTTCTACGACAAAGCGCATGTGCCAGTTGAGAAGTTTGTGTTCAAGCTTGCAGTTAACCAATCTTATGGCTCCAAGATAGAGGAGGCCAGCCTGGAATTCGCTCTGCGAGCTTTCTTGATCAAACTGGCTGTTGCTGAACCCCTTACTAGAACCCTTCCATCAGATGGCAGCTGGGAGATCGCTGCATACTTCCGATCCCTCCCTCCAGATGGTGAGAAGGAAGCTCAGCTGTGGATCCCTACAGACACCAAACAGTGGATGCAGCCTCCACAGATAACCCCAATCAAGTCCATGAGCTGTGATCCTGTGAAGATGCAGCTTTACCTGGAACAACCTAGCCGCACAGAACCCAGGGATCCACCAACTGAACCCTGA
More
|
||||||||||
| Protein seq | MCLSSRILNGKTRYFSTLRSSHTENKCILSVPVSSLSHHHLPILLSRATVSGLLLKLPLVHSVLRSLSLGPTPSLSFSFLSLLRRFANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEAHRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPQRCGGHVLLSNVYATTSRWADVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGINELLVAESFLILLSPTITKGQIAQVIVDFLEVAVSCVVFLKGFYPPRAFERRRYMNVVVQKAVHPQLAGYIHSATSGLLPFIQKGLVERVVVIFYDKAHVPVEKFVFKLAVNQSYGSKIEEASLEFALRAFLIKLAVAEPLTRTLPSDGSWEIAAYFRSLPPDGEKEAQLWIPTDTKQWMQPPQITPIKSMSCDPVKMQLYLEQPSRTEPRDPPTEP |
||||||||||
| Function | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic [UniProtKB/Swiss-Prot:O82380] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0427000 | OsMH63_08T0427000.1 | Chr08 | 28689388 | 28695226 | - | maker | ||
| CDS seq | ATGTGCTTATCTTCTCGGATTCTCAATGGGAAGACACGATATTTCTCCACTCTCAGAAGCTCGCACACTGAAAACAAATGTATCCTCTCTGTCCCGGTCTCATCTCTCTCACACCATCATCTCCCCATTCTCCTCTCCCGAGCAACCGTCTCGGGTCTTCTCCTTAAGCTACCGCTGGTCCACTCTGTCCTCCGTTCCCTCTCTTTGGGGCCTACCCCATCACTCTCTTTCTCCTTCCTCTCCCTACTTCGCCGTTTTGCCAACATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCTGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGATGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCACAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCACAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGCTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTAAGAAGCCCGGTTGCTCTTTCATTGAAGTCGATGGCTGCATACATGAATTCTTTGCGGGAGATGAGTCTCATTTTGAGACAGAAGCTATATGCAACACTCTTTTTGGGATCAATGAGCTACTAGTGGCGGAGTCCTTCCTAATTTTCAAATATGCCCTCTGGCTGGTGGATTATGCCAATCATAGGGGCATAAATCAATAG
More
|
|||||||
| Protein seq | MCLSSRILNGKTRYFSTLRSSHTENKCILSVPVSSLSHHHLPILLSRATVSGLLLKLPLVHSVLRSLSLGPTPSLSFSFLSLLRRFANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEAHRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPQRCGGHVLLSNVYATTSRWADVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGINELLVAESFLIFKYALWLVDYANHRGINQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0427000 | OsMH63_08T0427000.2 | Chr08 | 28689388 | 28695226 | - | maker | ||
| CDS seq | ATGTGCTTATCTTCTCGGATTCTCAATGGGAAGACACGATATTTCTCCACTCTCAGAAGCTCGCACACTGAAAACAAATGTATCCTCTCTGTCCCGGTCTCATCTCTCTCACACCATCATCTCCCCATTCTCCTCTCCCGAGCAACCGTCTCGGGTCTTCTCCTTAAGCTACCGCTGGTCCACTCTGTCCTCCGTTCCCTCTCTTTGGGGCCTACCCCATCACTCTCTTTCTCCTTCCTCTCCCTACTTCGCCGTTTTGCCAACATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCTGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGATGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCACAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCACAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGCTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTAAGAAGCCCGGTTGCTCTTTCATTGAAGTCGATGGCTGCATACATGAATTCTTTGCGGGAGATGAGTCTCATTTTGAGACAGAAGCTATATGCAACACTCTTTTTGGGATCAATGAGCTACTAGTGGCGGAGTCCTTCCTAATTTTACTATCACCTACAATTACTAAAGGTCAAATAGCACAAGTGATTGTGGATTTTCTAGAGGTAGCTGTCAGTTGTGTTGTCTTCCTCAAAGGCTTCTATCCTCCTCGTGCATTTGAGAGGAGAAGGTATATGAATGTAGTGGTCCAGAAAGCAGTGCACCCCCAACTTGCCGGTTATATCCACTCTGCTACTTCTGGCCTACTCCCTTTCATTCAGAAGGGATTGGTTGAGAGGGTTGTAGTCATCTTCTACGACAAAGCGCATGTGCCAGTTGAGAAGTTTGTGTTCAAGCTTGCAGTTAACCAATCTTATGGCTCCAAGATAGAGGAGGCCAGCCTGGAATTCGCTCTGCGAGCTTTCTTGATCAAACTGGCTGTTGCTGAACCCCTTACTAGAACCCTTCCATCAGATGGCAGCTGGGAGATCGCTGCATACTTCCGATCCCTCCCTCCAGATGGTGAGAAGGAAGCTCAGCTGTGGATCCCTACAGACACCAAACAGTGGATGCAGCCTCCACAGATAACCCCAATCAAGTCCATGAGCTGTGATCCTGTGAAGATGCAGCTTTACCTGGAACAACCTAGCCGCACAGAACCCAGGGATCCACCAACTGAACCCTGA
More
|
|||||||
| Protein seq | MCLSSRILNGKTRYFSTLRSSHTENKCILSVPVSSLSHHHLPILLSRATVSGLLLKLPLVHSVLRSLSLGPTPSLSFSFLSLLRRFANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEAHRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPQRCGGHVLLSNVYATTSRWADVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGINELLVAESFLILLSPTITKGQIAQVIVDFLEVAVSCVVFLKGFYPPRAFERRRYMNVVVQKAVHPQLAGYIHSATSGLLPFIQKGLVERVVVIFYDKAHVPVEKFVFKLAVNQSYGSKIEEASLEFALRAFLIKLAVAEPLTRTLPSDGSWEIAAYFRSLPPDGEKEAQLWIPTDTKQWMQPPQITPIKSMSCDPVKMQLYLEQPSRTEPRDPPTEP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0427000 | OsMH63_08T0427000.3 | Chr08 | 28689388 | 28694111 | - | maker | ||
| CDS seq | ATGTGCTTATCTTCTCGGATTCTCAATGGGAAGACACGATATTTCTCCACTCTCAGAAGCTCGCACACTGAAAACAAATGTATCCTCTCTGTCCCGGTCTCATCTCTCTCACACCATCATCTCCCCATTCTCCTCTCCCGAGCAACCGTCTCGGGTCTTCTCCTTAAGCTACCGCTGGTCCACTCTGTCCTCCGTTCCCTCTCTTTGGGGCCTACCCCATCACTCTCTTTCTCCTTCCTCTCCCTACTTCGCCGTTTTGCCAACATGACACTTGATAACTACTCCCTCAACATTGCCATCTCTGCTGCTGCTCGCGTCCCATCACTTGATGTTGGCTCCCAGTTTCATGCCCTTTCTTTGAAACTCAGCCTAGCTTCAGATTCATTTGTCCTTAATGCCCTTATCAACATGTACTCATCTTGTAATTATCCAGCTTCTGCAAGGTTAGTTCTTGATTCTGCTCCACGATGGGCCTCTGATGTAGTTTCTTGGAACACAATCATTGCTGGATACATACGAGGTGGTATGCCTAATAAGGCGTTGCAATCTTTTCACCAAATGGCCAAAGAGCAAGTTAGGCTGGACGAGGTCACTCTGTTAAATGTGCTGGTTGCTTGTGCAAGGACAGGCGCAATGAAGGTTGGGAGCCTTTGTCATGCTCTAGTTGTGCTGAATGGGTTTGAGATAAATTGTTATATTGGATCCTCTTTGGTTAGTATGTATGCAAAGTGTGGTATGGTTGAGGAAGCTCACAGGGTTTTTAATAGAATGCCTGAAAGGAATGTAGTTTGCTGGACCTCAATGATTGCTGGATGTACACAATCTGGTAGGTTTAAAGAGGCTGTTGATCTGTTTAGGGACATGCAAATTGCTGGTGTGAAGGCTGATGACGCTACAATTGCTACTGTTGTATCATCATGTGGCCAGATGGGAGCACTTGACTTGGGACGGTATCTCCATGCTTATTGTGATGGTCATGGTTTAGGGAAAGAGCTTTCTGTGAAAAATTCGTTGATTGATATGTACTCGAAGTGCGGGGATGTAAACAAGGCCTATCAGATATTTCGTGGATTGACAAAGCGGGATGTGTTTACTTGGACAGTAATGATAATGGGCTTTGCTATGAATGGTCTCTGCGTTGAGGCACTAGATTTGTTTGCACAGATGGAAGGAGAAGATAAGGTTATGCCGAATGAGGTCATTTTTTTGGGTGTGCTAACTGCTTGCAGCCATGGAGGTTTAGTGGAACAGGGGTACCATCACTTCCATCGCATGTCCAAGGTCTACAACCTTGTGCCAAGAATCGAACACTATGGATGCATGGTCGACCTTTTGGGACGTGCCAAGCTGTTGGCAGAGGCAGAGCAATTCATTAAAGATATGCCTGTCGCTCCTGATGTGGTAGTATGGCGGTCATTGTTGTTTGCCTGTAGAGCTTCTGGACAAGTGGGGCTTGCAGAATATGCAGCAGAAAGAATTGAACAGTTGGAACCACAAAGGTGTGGAGGGCATGTTTTACTCTCTAATGTATATGCTACCACATCAAGATGGGCTGATGTGAATAATGTGCGGACAGGGATGGGCAATAGTAGGACAAGTCAAATAGCACAAGTGATTGTGGATTTTCTAGAGGTAGCTGTCAGTTGTGTTGTCTTCCTCAAAGGCTTCTATCCTCCTCGTGCATTTGAGAGGAGAAGGTATATGAATGTAGTGGTCCAGAAAGCAGTGCACCCCCAACTTGCCGGTTATATCCACTCTGCTACTTCTGGCCTACTCCCTTTCATTCAGAAGGGATTGGTTGAGAGGGTTGTAGTCATCTTCTACGACAAAGCGCATGTGCCAGTTGAGAAGTTTGTGTTCAAGCTTGCAGTTAACCAATCTTATGGCTCCAAGATAGAGGAGGCCAGCCTGGAATTCGCTCTGCGAGCTTTCTTGATCAAACTGGCTGTTGCTGAACCCCTTACTAGAACCCTTCCATCAGATGGCAGCTGGGAGATCGCTGCATACTTCCGATCCCTCCCTCCAGATGGTGAGAAGGAAGCTCAGCTGTGGATCCCTACAGACACCAAACAGTGGATGCAGCCTCCACAGATAACCCCAATCAAGTCCATGAGCTGTGATCCTGTGAAGATGCAGCTTTACCTGGAACAACCTAGCCGCACAGAACCCAGGGATCCACCAACTGAACCCTGA
More
|
|||||||
| Protein seq | MCLSSRILNGKTRYFSTLRSSHTENKCILSVPVSSLSHHHLPILLSRATVSGLLLKLPLVHSVLRSLSLGPTPSLSFSFLSLLRRFANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEAHRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPQRCGGHVLLSNVYATTSRWADVNNVRTGMGNSRTSQIAQVIVDFLEVAVSCVVFLKGFYPPRAFERRRYMNVVVQKAVHPQLAGYIHSATSGLLPFIQKGLVERVVVIFYDKAHVPVEKFVFKLAVNQSYGSKIEEASLEFALRAFLIKLAVAEPLTRTLPSDGSWEIAAYFRSLPPDGEKEAQLWIPTDTKQWMQPPQITPIKSMSCDPVKMQLYLEQPSRTEPRDPPTEP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.623302 | 3.4482345 | 3.431504 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0538800 | RBH | 1.459534 | 1.716436 | 2.862342 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42610 | RBH | 0.987013 | 1.154446 | 0.736822 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0538800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023760 | RBH | 0.444739 | 2.421902 | 2.193058 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023570 | RBH | 0.192026 | 0.0 | 0.476893 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023550 | RBH | 0.471081 | 5.804913 | 3.275485 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023900 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023460 | RBH | 1.279143 | 3.398304 | 2.890507 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023350 | RBH | 0.108228 | 0.000000 | 0.580642 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0447300 | RBH | 2.5965345 | 4.2032965 | 4.6861545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022750 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023060 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0022880 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023720 | RBH | 0.309066 | 0.071569 | 0.298531 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0023050 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023240 | RBH | 0.0 | 0.000000 | 0.301700 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023370 | RBH | 0.000000 | 0.0 | 0.895575 |
