Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0267500 | OGI:06046960 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:17935378-17938655 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGATTTTTTTTCCCCTTCCGATTCCATCGGCCCCACTTCCGCGAAGGCGCGTCCTCTCTCTCTCTCTCTCCCCACAGCACGTCACGTCACGCTCACGCCGTCAGCCCTGGAAACTGACGGTGACGGCCGCCCGCCTCCGCCGAATAAATCAGCTGCCCCCACAACCATCACCATTTCCCCTCCCTCTCTCTCTGAATTTCTTTCTCCCCAAACCAAAACCAAACCGAAGCTTCCCCATCTCGCGTGAACTTCGGAGCAAGGAAGAACAAGGCGCCGCGCCGGATTTAGCCCCGCCCCCCTCTCCGGGGTATCCCCCCTCCTCTCCTCTGGTCGGTTCTTGCGGTGAGTCCCCGGCTGATTTGTCCTGTGAATTCTTGTGAGATTATTTTTCTTTTTTTTTTTTTTTTGGGGCGGTTGGCTTGGGATTTGGATTGGTGGGGAGTTTTTCTGATCTGTGTGGTGGTGTGGTGGTGTGCTTGCAGGGTTTGATTGGAGTGAGGTGAATCGGTGAGGTTGTGGCTCGGTTGGCGTCCGGATCGGAGGGGGTTCGGGCCCTTCCTGATTAATCCCTCTTCTGGTGAGCAATTTCTCTGGTTTTTTGTGTTAATTTGAGCTGAATTTACCCTGGGGATCGGGTGGATTTGATGGTCTGAGGCTGATCGATCCGGAATGATTTCTCCTTTGTAGATTCCGTGTGGGGGATTCAATCACTGGTGGGCAAAGGCGAGATATTTCGTCACTTCTCCCCCTCATCTAACCATGTCTGGTACGTTTCTCTTCATGCTCTGGAATTTCTCCCCTTCGGTTGAATGTTTCGGTGGTTAATAACGAATGGCTCTCTGAATTTTGTGCAGGTTTGATGTGCCTGGAGATCAAGATGGGATTGTAACCACGCTGGTTATCTCGCGATCGCAGAGGGTTTCCTCCATCCTCTAAGGAAGGAAAGGAACCCTTGCCCTTTCTTCTCCATGGCTTCTAATTCGTAGTGTGAAGGATCTGATTTTTAGGTTAGTGTAAATAGTAGCAGTAGTTGAGGAAGCTTCGGCATCCTAAGGACCTCCTGTGAAGATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAACATCGAGACTACCAGTGGAAAGAAGTTTCAATTCCAAGTGGACCAGAGCCGCAATGTCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCGATTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTTACTTCATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGGAACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCAGAGCATTTCCAGTGAAGGAGGTCCACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTGTGCAAGGATGAAGAAGGTGACAATTACATGTTGGTTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGGTACACGTTACTCTCTAGCACTCACTTTTCTTCTTGCATGAGATAGTACTTATTCTGGTAGACTAACGATAATTTTTTTTCCATTGTGACGCAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGCGCATCAGCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGACCGTCACCTCGACAAGAAGTTCGCTTAGAAACCCAGAATAACTGATCTAGTTGTTCAGCTGTATCCAGTCAGTTTGGTGTAAGTATGTTGACAAGCCACTCTTCAATGGACTAAATGATTTCATTTGTTTGTAGCATCTCAAACCTTCAAGTGCATTACCTACATACATTTTGTGAATATGTAAGCATGTGTTGTGTGTTGGTCGTGCGCATCATCAGCATGGTACTGTCTGAGAGACGAAATAAAATGTTGATTTAGTGCTGTTTTTGCTGGTGCTGTTCTTTAACTGTACTCCAAAGTTTGAAACTGCAAGGATGTTTGCTGTTCTTAAATACTGTTCCAACTCAATTTGGAGCGGTTTCCATTTAAGCCTTCAGTAAGAAAAAAAATCGCCTTTGCTGAAATTAATACTAGTAGATTATCTGCACTCGGC
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| CDS seq | ATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAACATCGAGACTACCAGTGGAAAGAAGTTTCAATTCCAAGTGGACCAGAGCCGCAATGTCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCGATTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTTACTTCATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGGAACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCAGAGCATTTCCAGTGAAGGAGGTCCACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTGTGCAAGGATGAAGAAGGTGACAATTACATGTTGGTTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGCGCATCAGCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGACCGTCACCTCGACAAGAAGTTCGCTTAG
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| Protein seq | MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSESIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLINIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISKKDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKENLQNEAHAVNPAKPAGARPALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNIAVFKPRDEEPMAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYILDHPIGDHESEERIGFSGVPPTALVRSLHRGKSFKIGSLQMFIQNNGSCEDMGPRAFPVKEVHKIAVLDLRLANADRHAGNILVCKDEEGDNYMLVPIDHGYCLPEKFEDCTFEWLYWPQAREPFSDETIAYIKSLDAEEDIKLLKFHGWELSARCARVLRISTMLLKKGAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLDKKFA |
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| Function | Phosphatidylinositol 4-kinase gamma 4 [UniProtKB/Swiss-Prot:Q6K881] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0267500 | OsMH63_06T0267500-mRNA-1 | Chr06 | 17935509 | 17938655 | + | maker | ||
| CDS seq | ATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAACATCGAGACTACCAGTGGAAAGAAGTTTCAATTCCAAGTGGACCAGAGCCGCAATGTCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCGATTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTTACTTCATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGGAACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCAGAGCATTTCCAGTGAAGGAGGTCCACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTGTGCAAGGATGAAGAAGGTGACAATTACATGTTGGTTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGCGCATCAGCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGACCGTCACCTCGACAAGAAGTTCGCTTAG
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| Protein seq | MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSESIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLINIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISKKDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKENLQNEAHAVNPAKPAGARPALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNIAVFKPRDEEPMAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYILDHPIGDHESEERIGFSGVPPTALVRSLHRGKSFKIGSLQMFIQNNGSCEDMGPRAFPVKEVHKIAVLDLRLANADRHAGNILVCKDEEGDNYMLVPIDHGYCLPEKFEDCTFEWLYWPQAREPFSDETIAYIKSLDAEEDIKLLKFHGWELSARCARVLRISTMLLKKGAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLDKKFA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0267500 | OsMH63_06T0267500-mRNA-2 | Chr06 | 17935554 | 17938655 | + | maker | ||
| CDS seq | ATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAACATCGAGACTACCAGTGGAAAGAAGTTTCAATTCCAAGTGGACCAGAGCCGCAATGTCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCGATTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTGTTTACTTCATGCAAGATGCATCAGGAGAGAAGAATATTGCAGTGTTTAAGCCCAGAGATGAGGAACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCAGAGCATTTCCAGTGAAGGAGGTCCACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTGTGCAAGGATGAAGAAGGTGACAATTACATGTTGGTTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGCGCATCAGCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGACCGTCACCTCGACAAGAAGTTCGCTTAG
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| Protein seq | MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSESIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLINIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISKKDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKENLQNEAHAVNPAKPAGARPALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGGVYFMQDASGEKNIAVFKPRDEEPMAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYILDHPIGDHESEERIGFSGVPPTALVRSLHRGKSFKIGSLQMFIQNNGSCEDMGPRAFPVKEVHKIAVLDLRLANADRHAGNILVCKDEEGDNYMLVPIDHGYCLPEKFEDCTFEWLYWPQAREPFSDETIAYIKSLDAEEDIKLLKFHGWELSARCARVLRISTMLLKKGAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLDKKFA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0267500 | OsMH63_06T0267500-mRNA-3 | Chr06 | 17935378 | 17938655 | + | maker | ||
| CDS seq | ATGGAGATTTTTTTTCCCCTTCCGATTCCATCGGCCCCACTTCCGCGAAGGCGCGTCCTCTCTCTCTCTCTCTCCCCACAGCACGTCACGTCACGCTCACGCCGTCAGCCCTGGAAACTGACGGTGACGGCCGCCCGCCTCCGCCGAATAAATCAGCTGCCCCCACAACCATCACCATTTCCCCTCCCTCTCTCTCTGAATTTCTTTCTCCCCAAACCAAAACCAAACCGAAGCTTCCCCATCTCGCGTGAACTTCGGAGCAAGGAAGAACAAGGCGCCGCGCCGGATTTAGCCCCGCCCCCCTCTCCGGGGTATCCCCCCTCCTCTCCTCTGGTCGGTTCTTGCGGTTTGATGTGCCTGGAGATCAAGATGGGATTGTAA
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| Protein seq | MEIFFPLPIPSAPLPRRRVLSLSLSPQHVTSRSRRQPWKLTVTAARLRRINQLPPQPSPFPLPLSLNFFLPKPKPNRSFPISRELRSKEEQGAAPDLAPPPSPGYPPSSPLVGSCGLMCLEIKMGL |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0267500 | OsMH63_06T0267500-mRNA-4 | Chr06 | 17935378 | 17938655 | + | maker | ||
| CDS seq | ATGGAGATTTTTTTTCCCCTTCCGATTCCATCGGCCCCACTTCCGCGAAGGCGCGTCCTCTCTCTCTCTCTCTCCCCACAGCACGTCACGTCACGCTCACGCCGTCAGCCCTGGAAACTGACGGTGACGGCCGCCCGCCTCCGCCGAATAAATCAGCTGCCCCCACAACCATCACCATTTCCCCTCCCTCTCTCTCTGAATTTCTTTCTCCCCAAACCAAAACCAAACCGAAGCTTCCCCATCTCGCGTGAACTTCGGAGCAAGGAAGAACAAGGCGCCGCGCCGGATTTAGCCCCGCCCCCCTCTCCGGGGTATCCCCCCTCCTCTCCTCTGGTCGGTTCTTGCGGTTTGATGTGCCTGGAGATCAAGATGGGATTGTAA
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| Protein seq | MEIFFPLPIPSAPLPRRRVLSLSLSPQHVTSRSRRQPWKLTVTAARLRRINQLPPQPSPFPLPLSLNFFLPKPKPNRSFPISRELRSKEEQGAAPDLAPPPSPGYPPSSPLVGSCGLMCLEIKMGL |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0267500 | OsMH63_06T0267500-mRNA-5 | Chr06 | 17936450 | 17938655 | + | maker | ||
| CDS seq | ATGTCGTCTGCTGCCATTGCCATTAGCCCGATGGTGGAAGAGTTTGCTCTCCTGCCCATCTGCTTCGACGGCAGCCGGTCGCCCCACTGTTTGTCCGGGTCACAGCTGCAGGATTCGATTATCATCTTTCTTGCTGTGCCTGGTGCCCCACCGATGCCGATGAGTGTGCTCGGCTCGGAGTCCATCGCCTCGGTCAAGCTGCGCATTCAGCGGTTCAAGGGGTTCGTGGTTAACAAGCAGAGGCTTGTGCTTGATGGGCACGAGCTGGCAAGGAACAACTGCCATGTGAAGGATTATGGGCTTGCCGATGGAAATGTTCTGCACCTTGTTATCCGCTTGGCTGATCTTCGCTTGATTAACATCGAGACTACCAGTGGAAAGAAGTTTCAATTCCAAGTGGACCAGAGCCGCAATGTCAAGTATCTCAAGAGTAAGCTGGCAGTGGAGGGAGATGAGGACCTTGGTGAGGATCACAAGCTTGAATGTGATGGCAAGGAGCTTGAGGACCACCAGCTGATTGCTGATATTAGCAAGAAGGATGATGCTGTGATCCATTTGTTCATCCGCAAGCCAGCAAAGTTACGGACACAGCAAGTTGATAAAGACACGGTGGTTACAGTTGTCACTCCGCAGGAGAAAGAGAACCTTCAAAATGAAGCTCATGCTGTGAACCCTGCTAAACCAGCTGGTGCTAGGCCTGCTCTTGTTGAACCGATTATCGTTAACCACAAGGTGAAGCTATCACTTGAAGTGATGAGAATGATTAGCTCAGCCATAGCTGGTCTTGAGAATGGATACTTGCCAGTGATGTCAGCTGAAGGTTCAGGGGGTCCCAGAGATGAGGAACCTATGGCTAAAAACAACCCAAGAGGGCTTCCAGTGTCGACTGATGGAGAAGGCATGAAGAGGGGGACACTTGTAGGGGAAGGTGCATTTAGGGAAGTTGCTGCTTATATTCTTGACCATCCAATTGGTGATCATGAATCTGAAGAACGTATCGGGTTCTCTGGTGTGCCTCCCACAGCATTGGTCCGGAGCTTACACAGGGGGAAGAGCTTCAAGATTGGATCACTGCAGATGTTCATTCAGAACAATGGAAGTTGTGAGGATATGGGTCCCAGAGCATTTCCAGTGAAGGAGGTCCACAAAATAGCAGTGTTAGATCTTAGGTTAGCAAACGCTGATCGTCATGCAGGGAACATTTTAGTGTGCAAGGATGAAGAAGGTGACAATTACATGTTGGTTCCAATTGATCATGGTTACTGCTTGCCAGAGAAGTTTGAAGATTGTACCTTTGAGTGGCTGTACTGGCCCCAGGCTCGTGAACCATTCAGTGATGAAACCATTGCATACATCAAATCACTAGACGCTGAAGAGGACATCAAGCTTCTCAAGTTCCATGGGTGGGAGCTGTCTGCAAGATGTGCTCGTGTCCTGCGCATCAGCACCATGCTTTTAAAGAAAGGTGCAGCACGAGGCCTCACACCGTATGACATCGGGCGTATACTGTGCAGGGAAACTGTGAATAGAGACTCTGAGATTGAGGACATCGTCCAGGAAGCCGAGGGCCATGTTCTCCCAGGGTCAAGTGAAGTAATCTTCTTAGAAACCGTATCTGAAATCATAGACCGTCACCTCGACAAGAAGTTCGCTTAG
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| Protein seq | MSSAAIAISPMVEEFALLPICFDGSRSPHCLSGSQLQDSIIIFLAVPGAPPMPMSVLGSESIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLADLRLINIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISKKDDAVIHLFIRKPAKLRTQQVDKDTVVTVVTPQEKENLQNEAHAVNPAKPAGARPALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGGPRDEEPMAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYILDHPIGDHESEERIGFSGVPPTALVRSLHRGKSFKIGSLQMFIQNNGSCEDMGPRAFPVKEVHKIAVLDLRLANADRHAGNILVCKDEEGDNYMLVPIDHGYCLPEKFEDCTFEWLYWPQAREPFSDETIAYIKSLDAEEDIKLLKFHGWELSARCARVLRISTMLLKKGAARGLTPYDIGRILCRETVNRDSEIEDIVQEAEGHVLPGSSEVIFLETVSEIIDRHLDKKFA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 54.607336 | 142.3926235 | 118.9454955 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0340600 | RBH | 21.642321 | 18.225737 | 27.789667 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g23290 | RBH | 14.642928 | 11.974533 | 7.080567 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0340600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0016430 | RBH | 6.726702 | 116.987373 | 32.573929 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0016270 | RBH | 1.900298 | 31.529932 | 11.803541 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0016400 | RBH | 15.419156 | 83.079987 | 41.819942 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0016400 | RBH | 1.737411 | 1.732329 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0016540 | RBH | 45.610970 | 87.886429 | 74.387085 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0016010 | RBH | 2.265629 | 4.141820 | 4.788577 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0244700 | RBH | 57.011488 | 125.914051 | 58.0614205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0016390 | RBH | 2.447570 | 1.634082 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0016360 | RBH | 6.131448 | 86.787209 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0016040 | RBH | 40.531155 | 107.599434 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0016720 | RBH | 6.348494 | 6.283409 | 7.715738 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0016170 | RBH | 3.232024 | 33.582287 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G016170 | RBH | 5.319463 | 9.950089 | 15.120990 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0016380 | RBH | 12.132844 | 81.810196 | 30.809267 |
