Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_05G0366600		OGI:05064350 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr05:24749554-24754289		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		AGTTCAGTTTGGCCATACGTGGCGTCATTTCGGCCTTTCTGCGACGGTCCTCGGCAGGGCTCCCCGTCCCCGCGAGCCGCGAAGCCGTAAATCCCCGGAGAGGCATTTCCTCGAACACCTGCCGCGCGCGCCGTCCGCCCCCAAAAACCCTCGCCCCAAACCCCGCGCCGGCCGAAGCGGCGGCTCCGTGCGGATGCCCTCCCGTCCCGTCCCGGCGCGCCCCGGCCGGCGGTAGTAGGAAGTGGGGGGCGCCGAGCGTAAGATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGGTAATCTCTTGCCTCTTTTTAAAGAAATATTTGTTCGGTGGATTGAACCTAGCTGAGCCCGACTGCCCGAGGTTTATGCATGGGTGATTCCGAGGCCTCGTTGTGAAGGGAGATTGCAATTTGGACGATTGGAATTTGTAGAGAATGGGGTTACTGTGTGATTAAGTTAGGAATTTGTCTCCCATTAGTTATCCCCGAGTTAACCTGGAGATCTTGGTGTCTTGGTGGCTCGTGAGAGCTTGCATAGTGGATTTGTGAAGTTTGAGCCATGTTTAAGCATTTGGGGATTGTCGTATGATTTACTTTGTGTTGTTTTAAGGTTCATTCGCACAGTGTAACATGCCTTGCTTTGTGGCATTCAAATTGCTCATTTGAATTCTATTCGTCTTGCCTACAGAGACAGCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACAGAAGTTCAAGGGTAGAAAGATCAACAAGAACAAGTAAGAAAACTGTCAATGATCTTCCAGGTGTGAATATTTCGTTTGCATGTGCCTTGTGCTCATCCACTGTTTCAGCCAAAGATTCTGGGATAAGTTGAAATTTTTCAGGGAATGTATCTCATTAACAATGAGATAATCACATGGGCTTACAAAAGAGTGATGATTACTAACAGATACAATGATATCAGGCCGAGAGAACCAGAATATAAATCATAAACCTCTTTGAAATATCATGGTTGGAGGCTTTTGCTGATGTGCATTTGAAGAGACAGGAACACACTTCTCTCATTTATATCTTCACGGATGCAAGAGATTATCTAGAGACAGGTCCTTTGCTTATGAGGCCTGAACTGTTTATCTGAGATTGTTCCACCATAGCGCAAACTTGAGCCAATGAAGAGTTAATTCTCGATTGAATTATGTGTGATGTGCTTCTACTGGATTATCATGTGAATGACTTGTGATTTGTTCAGCACTCACTGGTTCAATTTCTGCTTGTTCTGCACTTCTACAAGTTCAATTTCAGCATTGCCATTCATGTTCAGTGCCGTGAAGAATAGTTGGAGCCTTGAGTAAGTTGTTTAGGTCCTTGTCGTGGATCACTAGATATAACAAATTAAATATAGATCACATTCTTTTATTGTCCTCTACTTTGCCATGCAGCCAAGTAGAATATTTTGTACTCATGTAAACTGTTAGTCCAAAGGAAGTGGCTAAATTTCTGTCGATTTTTCCTCCCATTTTATTAGTTTTTTGGATCTTTGGATTGCATATCAAGATTCGTGCAAAGAAACTGAGGTTCCACCTGTTTTGTTTTTTTATTCGAACCCCCTTTGTTACTGCGCCTCCTCCTTTTTGTTTTCTTTTCACCAGATGGAGAGAGGGGGGAAGCTACATGAGAGGAGAGGTGATGGGGGCGATTTCGTCGCCGGTAGATCCTGCAGCGGTGAGCTTCCTGATCCCTCCTGTCATTTTTGTGTTGATTTTGTCTTCCTTGTCCTCTGCAGGTTTCAGCAATCTATGACTGGAGGCCAGTGGTGTCGAGCTTGGCCAGGCTTTTGTCGGTGTAGCACTTCTTCTGTCTGTAAGGCCCCCCTAGCTTGTCGTCCCTTCTGAATCCAGTAGCTAGGTTTCACCGGTGCTCTAGTTCTTCCTTCTCATGCTTTGTTGTTTATATGCATTAGGGTGGTTATACAGGTTTTTAGTACGGTTCAATCCTCTTTTCGTTTTGTATGCTTATGGACTCTGTTAAATTTTTGTGGCTTAGAGATTACACTTTCAGTTGTGCTCCTGGCTATTTCACTCTTTCCCCTGCTTCATTTTTGTTTTGATGCATAATATTGTATGGTTAACATGCAAATGCAAAAAATCAACCAATAAATGGTCTATGTGTTTTTCTGCAATCATATATGCATTTGATTAGAGTTTTCTTTACCAGAGATGTGGGGTTGATTCATGATTCCCCCCTATACACAGATTAGGTACTTTCCCCCCCTTCATCTTTTCCAATTCCTGTTGCTCTTCCTCTTCCTTGTCTTCGTCCTCTCTTTTTTTACTGTTCCTCTTATTCCTGCTGATTTTTTCCTTTTTTTTTTGTTTTCTAGCACCATGTTCTGAATTTTTATATCAGCTGATCTTTTAATATTCAAATAGATGTCCAGCATCAGTACCTTGCACAAAATTTCTCAATACATATTTTTCATTTTTTTGTGGTTTTATATCTGCTTCAGAAATAATGGTTTTACTATATTTCAACAACTCTAGTGGCAATCCCTTCGAATTCTACCTTTTATCTGAACCTGAATTTTGTTCAGTCGCAAACATGCTTCGACAATTTTCATGTTTTCTTGAGATGATGGTATATATTTATTTTACCTGCAATATTCAATCAAACATCTCACCCTTTTACTTCCTGATAACAATGTGAAGATAAATGCATTTCTCGAGTACATTAAAATGGGAGTGGCATTAGTTTTCAAGCATTATTCTATCAGACTGCAGTTCCTGAAAAAAAATGCTTGATTTGTGATTGCATCAGGTTTCCACATTAGAGATACCTAGCTTTAGATGAGCTCACCTCTGAAGTCAGCATGCTCAATCTTGAGCGTGCTAGGCAAATAAAGAGTCGACTGGTCGCTATATCTGGCATAGTTCACAAGGTCAGCTTGAGCATTATGGTATATACTACAAGTATATGTGAACATTTATACAATGATGATATGGTTTATTGTGACTTTGTGAGTAATTCTGAAGTGTCCGAGTGCTATTTCCATGAATCGTTTGACAGGTCAAGGATGAACTACAGTGCTAGCTAGATGACGACATCGACATGACAAAGCTCGCTTACCACTCAGCTGGCTGCCAGTCATCAAGATTTGACATCGAGAAAGAAGCAAGCGAGCTCGAAGATAGTAATAGGTATACTCCTACAAGACAAAAAAAAAAAAAATCTTCCACAAGTTGATAAGTTGGTGCTTCATCCAACCATGGACATGACGTGTGCCTGAATGCAGCGCCAGGGAGGACGATGTTGATAAGTTGCAAACATGCTTCCACAATTTTCATGTTTTCTTGGGATGATAGCATACGGAGTATAAGCCTTCATTTTATATTTTTACCTACAATATTCAGTCAAGCATCTCACCCTTTTACTTACTGATAACAATGTAAAGATAGATGCATTGCTCGAGTACATTAAAATTGGAGTGGCATTAGTTTTGAAGCATTATTCCTGAAAAAAAAATGTTGTTTTTCTCGCCTGGGCTGTGTATGTTGTGTTGTTGAGTTGTGTATTCGGCTTTGTGGGCCAAAAAGAACATGCGAATGTTTTGGCAAAGAAGAATCCAGCCATTCTTGACCGAGGTGGCCCTAAACAACATTCGAATGTTGGGTAGACAATCCCTATTCCCTA More
CDS seq		ATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACAGCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACAGAAGTTCAAGGGTAGAAAGATCAACAAGAACAACACTCACTGGTTCAATTTCTGCTTGTTCTGCACTTCTACAAGTTCAATTTCAGCATTGCCATTCATGTTCAGTGCCGTGAAGAATAGTTGGAGCCTTGAATGGAGAGAGGGGGGAAGCTACATGAGAGGAGAGGTGATGGGGGCGATTTCGTCGCCGGTAGATCCTGCAGCGGTTTCAGCAATCTATGACTGGAGGCCAGTGGTGTCGAGCTTGGCCAGGCTTTTGTCGGTGTAG More
Protein seq		MRRFSPAAAALLLRRSLAAAAAAASPALRSGPRQLVRASLLDESLSTQTSSAASTMAVQYHQWSSSADGDDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLLSKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDKCLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSHQPSIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKQKFKGRKINKNNTHWFNFCLFCTSTSSISALPFMFSAVKNSWSLEWREGGSYMRGEVMGAISSPVDPAAVSAIYDWRPVVSSLARLLSV
Function		Pentatricopeptide repeat-containing protein At1g11900 [UniProtKB/Swiss-Prot:Q5BIV3]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_05G0366600	OsMH63_05T0366600-mRNA-1	Chr05	24749554	24754215	+	maker
CDS seq	ATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACAGCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACAGAAGTTCAAGGGTAGAAAGATCAACAAGAACAACACTCACTGGTTCAATTTCTGCTTGTTCTGCACTTCTACAAGTTCAATTTCAGCATTGCCATTCATGTTCAGTGCCGTGAAGAATAGTTGGAGCCTTGAATGGAGAGAGGGGGGAAGCTACATGAGAGGAGAGGTGATGGGGGCGATTTCGTCGCCGGTAGATCCTGCAGCGGTTTCAGCAATCTATGACTGGAGGCCAGTGGTGTCGAGCTTGGCCAGGCTTTTGTCGGTGTAG More
Protein seq	MRRFSPAAAALLLRRSLAAAAAAASPALRSGPRQLVRASLLDESLSTQTSSAASTMAVQYHQWSSSADGDDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLLSKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDKCLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSHQPSIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKQKFKGRKINKNNTHWFNFCLFCTSTSSISALPFMFSAVKNSWSLEWREGGSYMRGEVMGAISSPVDPAAVSAIYDWRPVVSSLARLLSV More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_05G0366600	OsMH63_05T0366600-mRNA-2	Chr05	24749554	24754289	+	maker
CDS seq	ATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACAGCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACAGAAGTTCAAGGGTAGAAAGATCAACAAGAACAAGTAA More
Protein seq	MRRFSPAAAALLLRRSLAAAAAAASPALRSGPRQLVRASLLDESLSTQTSSAASTMAVQYHQWSSSADGDDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLLSKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDKCLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSHQPSIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKQKFKGRKINKNK More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_05G0366600	OsMH63_05T0366600-mRNA-3	Chr05	24749554	24754289	+	maker
CDS seq	ATGACTTGTGATTTGTTCAGCACTCACTGGTTCAATTTCTGCTTGTTCTGCACTTCTACAAGTTCAATTTCAGCATTGCCATTCATGTTCAGTGCCGTGAAGAATAGTTGGAGCCTTGAATGGAGAGAGGGGGGAAGCTACATGAGAGGAGAGGTGATGGGGGCGATTTCGTCGCCGGTAGATCCTGCAGCGGTTTCAGCAATCTATGACTGGAGGCCAGTGGTGTCGAGCTTGGCCAGGCTTTTGTCGGTCAAGGATGAACTACAGTGCTAG More
Protein seq	MTCDLFSTHWFNFCLFCTSTSSISALPFMFSAVKNSWSLEWREGGSYMRGEVMGAISSPVDPAAVSAIYDWRPVVSSLARLLSVKDELQC

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_05G0366600	OsMH63_05T0366600-mRNA-4	Chr05	24749554	24754289	+	maker
CDS seq	ATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACAGCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACAGAAGTTCAAGGGTAGAAAGATCAACAAGAACAAGTAA More
Protein seq	MRRFSPAAAALLLRRSLAAAAAAASPALRSGPRQLVRASLLDESLSTQTSSAASTMAVQYHQWSSSADGDDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLLSKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDKCLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSHQPSIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKQKFKGRKINKNK More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.5444945	4.7563695	6.7364

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_05g0481800	RBH	0.865816	0.956691	0.703383
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os05g40320	RBH	0.560317	0.541125	0.173273
Nipponbare \| IRGSP 1.0 \| RAP-db	Os05g0481800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_05g0021170	RBH	0.201950	0.930872	1.078692
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_05g0021130	RBH	0.134302	0.558531	0.508345
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_05g0021020	RBH	0.298685	0.790588	2.688075
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_05g0021040	RBH	0.110480	0.041780	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_05g0021120	RBH	1.496999	4.881203	3.500338
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0574300	RBH	0	0	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_05g0020700	RBH	0.187165	0.0	0.528321
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_05G0376800	RBH	1.915354	4.0328795	10.158333
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_05g0020950	RBH	0.037547	0.249817	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_05g0020930	RBH	0.235864	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_05g0021000	RBH	0.835957	4.473958	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_05g0021060	RBH	0.130820	0.423576	0.241291
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_05g0021080	RBH	0.051203	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_05G020510	RBH	0.228899	0.569899	0.365464
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_05g0020950	RBH	0.160124	1.858575	1.253116

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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