Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_03G0588700 | OGI:03096410 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:37678828-37683536 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | AGTCAGTTGACCCTAGGGGTTTTTGGGTCGGCCTTGTTCGAGCGCTCCACTTGCTCGCGTTCACATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGGTACTGTGGTTCACATCATAGCAACTAGCAACGGATTCTTTGGTTCTTGATTTTCTTTTTATTTTCTTTGGTTCTTGATTCTTTAGTTCCTCTTCTATGCAGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAAGTATGATTTCCTCCATGAACCCTGTCTTGTTCATCTGTCTTGCTCGGTTTTGGTTTGATTTGTATATATAGTGTCTCATTCAGGAGAAAGTTTCAGTGACTGTTATAGCTAGGCTTTCATGCCATTTTGCTAGGCCCAGATTTGTATGCCAGGAGAAAGTTTCATTTTGCTTTCATGCCATTCAGGAGAAAGTTTCAGTTACTGCTAATTTAAAGTTTCCTATTGCCCTATTGCCTTGTGTAAAATAGATGGTCTTTTACTTTGTCTCTATATAACCTGGATTTTCTCAATATTCAGGATATACTGAACGAAACACTGAATAAGTAGCATTTTTGCATGCTGCTGACAACATGCTGTTGTGCAGATTTTTACACCAAAATTTCCTTTCCATACATTATGTGATAGAAAATTATTTTAGATGGCAAATGATACATTTGTGTTGTTCGTTGCTTTGTTTCAAGTAAGGAAATGCGGACACCCAACGCATTTTTTGGACTTGGCACTAACAGTGGTGAAGATATTGAGATGGGTGATGGTGATAGTGACTCTGAACAAGTTGGTCCTGTAGATGAGCATGTGAATCCAGTAATACAAGCTTTAACAAGGAAATTCAGATCTGAGGCTTGGAAAGAGTTTGTGCCGATACTCATTGATAATGAAGTTGGTGCAGGAAAATGTAAGCACTGTGATACAGAGATCCGTGCAAAGCGTGGAGCGGGAACAAGTTCATTGAGGATGCATTTGACAAGATGCAAGAAGCGAATTAGTGCTCTTAAGATTGTGGGAAATCTTGACTCTACACTTATGTCTCCTAATAGTGTAAGGTTAAAGAATTGGAGCTTTGATCCTAATGTTTCTAGAAAAGAGCTCATGCGAATGATTGTATTACATGAGTTGCCCTTCCAGTTTGTGGAGTATGATGGATTTAGAAGTTTTGCTGCTAGTCTTAACCCCTACTTCAAGATTATTTCAAGAACAACTATAAGGAATGATTGCATCGCTGCTTTTAAAGAGCAAAAGTTAGCAATGAAGGACATGTTCAAGGGTGCAAATTGTAGGTTCTCATTGACTGCAGATATATGGACTTCGAACCAAACAATGGGATACATGTGTGTGACATGTCATTTCATTGACACAGATTGGAGAGTACAGAAGAGGATTATAAAGTTCTTTGGAGTAAAGACACCTCATACTGGAGTGCAGATGTTCAATGCTATGCTCAGCTGCATTCAAGATTGGAATATCGCAGACAAAATATTCAGTGTTACTTTGGATAATGCTTCAGCCAATGATTCAATGGCTAAGTTGTTAAAGTGCAATTTGAAAGCTAAGAAAACTATACTAGTAGGAGGGAAGCTACTTCACAACTGATGTGCAGCACATGTCATCAATCTCATAGCCAAAGATGGGTTGAAGGTTATTGATTCTATTGTTTGCAACATCCGTGAAAGTGTGAAGTACATGGATAATTCCCTATCTCGCAAAGAAAAGTTTGAGGAGATCATTGCCCAAGAAGGGATCACATGCGAGTTGCATCCCACTGTGGATGTATGTACTCGTTGGAACTCCACATATCTAATTCTCAATGCAGCCTTCCCTTTCATGAGGGCTTATGCTTCATTGGCTGTTCAAGACAAAAATTACAAATATGCACCCTCTCCTGATCAGTGGGAAAGAGCAACCATAGTCTCTGGAATTTTGAAGGTGCTTTATGATGCAACTATGGTGGTGTCTGGATCTTTATATCCAACATCAAACCTTTATTTCCATGAGATGTGGAAAATCAAATTGGTCTTGGACAAGGAACGCTCTAACAATGACACTGAAGTGGCAAGTATGGTTCAAAAGATGAAGGACAAATTTGACAAGTATTGGCTTAAGTCTTACAAATATCTGTGCATTCCTGTCATTTTTGACCCAAGATTCAAATTCAAGTTTGTGGAATTTTGGCTTGGGCAAGCCTTTGGTGAAAATGCTAAAGAGAGGATTGACAAAGTTAAGAAGAGAATGAACATGTTGTTTAAGGAGTACTCTGATAAACTCAAGGATAGCAATGCTAACCCACTGCGCCAAGCTGAACATGTGATGGCTATCTCTGAAAATGATCCTATGGCTGATTGGGTTCAACACATCTCTGAACAATGAAGTGAGCAAGTTGATACTGAATTGGATATTTACCTCAAAGAGAATCCTATTCAGGAATTTGGGAACAAATTTGACATTCTAAATTGGTGGAAGACCAATCGCTCAAAGTATCCAACTCTAGCTTGCATAGCACAGGATGTGCTAGCATGGCCTGCTTCAACAGTTGCATCTGAGTCCGCATTCAGCACAGGATCTAGAGTGATCAGTGATTTCAGATGTAGCCTTACAATGGATTCAGTTGAGGCGCTTATCTGCCTCCAAGATTGGTTTCGAGCTTCTGCCGGTATACACGACTGCCCTCGTTCATTTACTTCTAGTATTTATCTTGCTAAAACTAATTTATTTTTATGTTTTGATTGCTAGGTCCTAACATAAATGTGAGCTCAGTAAATGAAATCAACTACAGTGATAATTTTGTGGTTAGTAAATTGCTTGTGCTCTTCTTATCATCTGTCTATTTAATTTTCTGAAAGAGAAAGATGTCTATTTATTCAGTATTTGCTTGATTGCTTGCAAGATCTCTTCCAGCTTTTCTCTTTCTATTTATCCAGTATTGAACAATGCCTATATGGGTTTGTTGTCCTACTTGCTAGCTTTCTATAAAATTGGAATATGAAGTTTCAATGTCTCTATCATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGGTTAGTAATCTATCATGAACTTGTATTATACTATTTATAATCTGAGCTAGTTCAACTCTTTTACAACATATGAGAAGCTCTAGATGTACAAAAGGAATAAGCCTCATTTCTGGTATTGCAATGCTTTGCTTTCTGAAATAAAACGATAGCCTAAAAATAGACTGTACTGCACTACTGCTAGATAAATGAAGAAAATTAGTAAAATCTGCAAATTTGTGTAGCACATGTTAGATGATTCTTGTATTCCTTAATCTCTGATTGTGAATACTATTGAGTGACTGCAGATTAATTCTGTTTTTCAAGCATGTTTTATATGTCAAATACTCAAATGCTTAGAACACCTACTGTGTTGATTCCTCTGTCTGTCTGCATATGCTCATGTCTTGATTCAGTTGTTGCCCATAAAACATAAATGCACCATTTCTTTTTCTGAGAGATATTGCAGGTTATTACCTTTTTAAAACAATTACTGTATATTTTCTTCCTGTTATTATACCATGATCATTCGATCTCTCCATCATGTTAACCTGCAGAATCTGGACCTGGGTGATTCAACGAACAGTGCAAGCTAGGGAACGCCAAATGATGCCCACTTTGATCTTGGAAGGCTGCATTTTGTTTGATCTCAATCTAATGAACCGGATATTTGGGTTGTTCAAATCGATTTTTGTGAATGATATGAGTACATGCATGTACTTAGTTTTAATTGAACTGGGTGCCAGTACCCAGTGATTGATGTTTGTACTTTTGAATGCAAAAGATTAAGTCATTTCGGAATGTTTGCATTGGGTATACAGTGTGTTCTGGTATGGTTTTTGATTATTTATTTATTTTGCTGTAGTGCTGTTGATTTGCTTCGCACAACCGAAATTTCTAGTATGTTAGTATGTGTTCAGATATCATGCTAGTGTATGTGTTTTTGTTTCCTTATTTCACTTGATATCTGACTTATATAAAATTAGTATAGTACAAAAATGATATCAGTTTAATATAAAATGATTGTTCATATTATTTTTGAATCTTGTATAATTGAATTGACGTATAGCTACTTGCTTTAATGGTTCACTGATAACACATTAACACAGCCAGTCAACCATTCACTGGACACGGTGGCTCAGACGCTCAGTGCATCCGGCCCGCAGCTACGGTGGGTCGGCCACGAACCTAACGGGCCAGCTCCACTTCCACCAGAGACGGGGCGAGCTCAGGCACCAAGATAG
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CDS seq | AGTCAGTTGACCCTAGGGGTTTTTGGGTCGGCCTTGTTCGAGCGCTCCACTTGCTCGCGTTCACATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGTTCCTCTTCTATGCAGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAATTTCAATGTCTCTATCATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGTGCTGTTGATTTGCTTCGCACAACCGAAATTTCTACCAGTCAACCATTCACTGGACACGGTGGCTCAGACGCTCAGTGCATCCGGCCCGCAGCTACGGTGGGTCGGCCACGAACCTAACGGGCCAGCTCCACTTCCACCAGAGACGGGGCGAGCTCAGGCACCAAGATAG
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Protein seq | SQLTLGVFGSALFERSTCSRSHGGSGFRAPGLRRCGSTADRAGGGAAPPRIEPAAVAPSGGGGGVGAAPRRIEVAAAAASASRCAPPRVEAAAAGRAPSVLLPSPTPPKTVPLLCSSFFRRRMEAPAGGGYLLGGQPARCSGGHSTGSNGEGFEGRPATSPPSSSWVSLTREHNFNVSIMYSSLSIEPGPGGFHGWTGWWKLVNAQTKDLDIDVLLICFAQPKFLPVNHSLDTVAQTLSASGPQLRWVGHEPNGPAPLPPETGRAQAPR |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_03G0588700 | OsMH63_03T0588700-mRNA-1 | Chr03 | 37678828 | 37683536 | + | maker | ||
CDS seq | AGTCAGTTGACCCTAGGGGTTTTTGGGTCGGCCTTGTTCGAGCGCTCCACTTGCTCGCGTTCACATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGTTCCTCTTCTATGCAGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAATTTCAATGTCTCTATCATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGTGCTGTTGATTTGCTTCGCACAACCGAAATTTCTACCAGTCAACCATTCACTGGACACGGTGGCTCAGACGCTCAGTGCATCCGGCCCGCAGCTACGGTGGGTCGGCCACGAACCTAACGGGCCAGCTCCACTTCCACCAGAGACGGGGCGAGCTCAGGCACCAAGATAG
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Protein seq | SQLTLGVFGSALFERSTCSRSHGGSGFRAPGLRRCGSTADRAGGGAAPPRIEPAAVAPSGGGGGVGAAPRRIEVAAAAASASRCAPPRVEAAAAGRAPSVLLPSPTPPKTVPLLCSSFFRRRMEAPAGGGYLLGGQPARCSGGHSTGSNGEGFEGRPATSPPSSSWVSLTREHNFNVSIMYSSLSIEPGPGGFHGWTGWWKLVNAQTKDLDIDVLLICFAQPKFLPVNHSLDTVAQTLSASGPQLRWVGHEPNGPAPLPPETGRAQAPR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_03G0588700 | OsMH63_03T0588700-mRNA-2 | Chr03 | 37678846 | 37683536 | + | maker | ||
CDS seq | ATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGTGCTGTTGATTTGCTTCGCACAACCGAAATTTCTACCAGTCAACCATTCACTGGACACGGTGGCTCAGACGCTCAGTGCATCCGGCCCGCAGCTACGGTGGGTCGGCCACGAACCTAACGGGCCAGCTCCACTTCCACCAGAGACGGGGCGAGCTCAGGCACCAAGATAG
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Protein seq | MYSSLSIEPGPGGFHGWTGWWKLVNAQTKDLDIDVLLICFAQPKFLPVNHSLDTVAQTLSASGPQLRWVGHEPNGPAPLPPETGRAQAPR |
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_03G0588700 | OsMH63_03T0588700-mRNA-3 | Chr03 | 37678846 | 37683536 | + | maker | ||
CDS seq | ATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCTTTCAATGTCTCTATCATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGTGCTGTTGATTTGCTTCGCACAACCGAAATTTCTACCAGTCAACCATTCACTGGACACGGTGGCTCAGACGCTCAGTGCATCCGGCCCGCAGCTACGGTGGGTCGGCCACGAACCTAACGGGCCAGCTCCACTTCCACCAGAGACGGGGCGAGCTCAGGCACCAAGATAG
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Protein seq | MAAAALGHPACGGAAPRRIEPAAVRLHRGSSRRRWLPAEAAAVSAQLHGGSRWRRRQLRLRGVLHRGLRRRRLGVLLQSSSHLQLPPRLFLLSAADGGTGGRRLPAWWPTGEVLRRTLHRQQRRGFRRTPGHIATFVQLGFSNSFNVSIMYSSLSIEPGPGGFHGWTGWWKLVNAQTKDLDIDVLLICFAQPKFLPVNHSLDTVAQTLSASGPQLRWVGHEPNGPAPLPPETGRAQAPR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_03G0588700 | OsMH63_03T0588700-mRNA-4 | Chr03 | 37678828 | 37683536 | + | maker | ||
CDS seq | ATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGTTCCTCTTCTATGCAGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAA
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Protein seq | MAAAALGHPACGGAAPRRIEPAAVRLHRGSSRRRWLPAEAAAVSAQLHGGSRWRRRQLRLRGVLHRGLRRRRLGVLLQSSSHLQLPPRLFLFYAVPSFGGGWRHRRAAATCLVANRRGAPEDTPPAATARVSKDARPHRHLRPAGFL |
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_03G0588700 | OsMH63_03T0588700-mRNA-5 | Chr03 | 37678846 | 37683218 | + | maker | ||
CDS seq | ATGGCGGCAGCGGCTTTAGGGCACCCGGCTTGCGGCGGTGCGGCTCCACGGCGGATCGAGCCGGCGGCGGTGCGGCTCCACCGCGGATCGAGCCGGCGGCGGTGGCTCCCAGCGGAGGCGGCGGCGGTGTCGGCGCAGCTCCACGGCGGATCGAGGTGGCGGCGGCGGCAGCTTCGGCTTCGCGGTGTGCTCCACCGCGGGTTGAGGCGGCGGCGGCTGGGCGTGCTCCTTCAGTCCTCCTCCCATCTCCAACTCCCCCCAAGACTGTTCCTTCTTTCGGCGGCGGATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGA
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Protein seq | MAAAALGHPACGGAAPRRIEPAAVRLHRGSSRRRWLPAEAAAVSAQLHGGSRWRRRQLRLRGVLHRGLRRRRLGVLLQSSSHLQLPPRLFLLSAADGGTGGRRLPAWWPTGEVLRRTLHRQQRRGFRRTPGHIATFVQLGFSNS |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 1.396643 | 4.886403 | 6.4397155 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0822100 | SBH | 0.525793 | 0.492459 | 0.214415 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g60730 | SBH | 0.323276 | 0.311655 | 0.050182 |
Nipponbare | IRGSP 1.0 | RAP-db | Os03g0822100 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0039780 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0039860 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0040090 | RBH | 0.025388 | 0.020478 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0591300 | SBH | 1.9493185 | 8.178854 | 12.525571 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G039460 | RBH | 0.447863 | 0.986764 | 0.711282 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0039210 | RBH | 0.0 | 0.0 | 0.000000 |