Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_03G0591300 OGI:03096410 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr03:37399792-37403620
Gene Symbol -
DNA seq

ATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAAGTATGATTTCCTCCATGAACCCTGTCTTGTTCATCTGTCTTGCTCGGTTTTGGTTTGATTTGTATATATAGTGTCTCATTCAGGAGAAAGTTTCAGTGACTGTTATAGCTAGGCTTTCATGCCATTTTGCTAGGCCCAGATTTGTATGCCAGGAGAAAGTTTCATTTTGCTTTCATGCCATTCAGGAGAAAGTTTCAGTTACTGCTAATTTAAAGTTTCCTATTGCCCTATTGCCTTGTGTAAAATAGATGGTCTTTTACTTTGTCTCTATATAACCTGGATTTTCTCAATATTCAGGATATACTGAACGAAACACTGAATAAGTAGCATTTTTGCATGCTGCTGACAACATGCTGTTGTGCAGATTTTTACACCAAAATTTCCTTTCCATACATTATGTGATAGAAAATTATTTTAGATGGCAAATGATACATTTGTGTTGTTCGTTGCTTTGTTTCAAGTAAGGAAATGCGGACACCCAACGCATTTTTTGGACTTGGCACTAACAGTGGTGAAGATATTGAGATGGGTGATGGTGATAGTGACTCTGAACAAGTTGGTCCTGTAGATGAGCATGTGAATCCAGTAATACAAGCTTTAACAAGGAAATTCAGATCTGAGGCTTGGAAAGAGTTTGTGCCGATACTCATTGATAATGAAGTTGGTGCAGGAAAATGTAAGCACTGTGATACAGAGATCCGTGCAAAGCGTGGAGCGGGAACAAGTTCATTGAGGATGCATTTGACAAGATGCAAGAAGCGAATTAGTGCTCTTAAGATTGTGGGAAATCTTGACTCTACACTTATGTCTCCTAATAGTGTAAGGTTAAAGAATTGGAGCTTTGATCCTAATGTTTCTAGAAAAGAGCTCATGCGAATGATTGTATTACATGAGTTGCCCTTCCAGTTTGTGGAGTATGATGGATTTAGAAGTTTTGCTGCTAGTCTTAACCCCTACTTCAAGATTATTTCAAGAACAACTATAAGGAATGATTGCATCGCTGCTTTTAAAGAGCAAAAGTTAGCAATGAAGGACATGTTCAAGGGTGCAAATTGTAGGTTCTCATTGACTGCAGATATATGGACTTCGAACCAAACAATGGGATACATGTGTGTGACATGTCATTTCATTGACACAGATTGGAGAGTACAGAAGAGGATTATAAAGTTCTTTGGAGTAAAGACACCTCATACTGGAGTGCAGATGTTCAATGCTATGCTCAGCTGCATTCAAGATTGGAATATCGCAGACAAAATATTCAGTGTTACTTTGGATAATGCTTCAGCCAATGATTCAATGGCTAAGTTGTTAAAGTGCAATTTGAAAGCTAAGAAAACTATACTAGTAGGAGGGAAGCTACTTCACAACTGATGTGCAGCACATGTCATCAATCTCATAGCCAAAGATGGGTTGAAGGTTATTGATTCTATTGTTTGCAACATCCGTGAAAGTGTGAAGTACATGGATAATTCCCTATCTCGCAAAGAAAAGTTTGAGGAGATCATTGCCCAAGAAGGGATCACATGCGAGTTGCATCCCACTGTGGATGTATGTACTCGTTGGAACTCCACATATCTAATTCTCAATGCAGCCTTCCCTTTCATGAGGGCTTATGCTTCATTGGCTGTTCAAGACAAAAATTACAAATATGCACCCTCTCCTGATCAGTGGGAAAGAGCAACCATAGTCTCTGGAATTTTGAAGGTGCTTTATGATGCAACTATGGTGGTGTCTGGATCTTTATATCCAACATCAAACCTTTATTTCCATGAGATGTGGAAAATCAAATTGGTCTTGGACAAGGAACGCTCTAACAATGACACTGAAGTGGCAAGTATGGTTCAAAAGATGAAGGACAAATTTGACAAGTATTGGCTTAAGTCTTACAAATATCTGTGCATTCCTGTCATTTTTGACCCAAGATTCAAATTCAAGTTTGTGGAATTTTGGCTTGGGCAAGCCTTTGGTGAAAATGCTAAAGAGAGGATTGACAAAGTTAAGAAGAGAATGAACATGTTGTTTAAGGAGTACTCTGATAAACTCAAGGATAGCAATGCTAACCCACTGCGCCAAGCTGAACATGTGATGGCTATCTCTGAAAATGATCCTATGGCTGATTGGGTTCAACACATCTCTGAACAATGAAGTGAGCAAGTTGATACTGAATTGGATATTTACCTCAAAGAGAATCCTATTCAGGAATTTGGGAACAAATTTGACATTCTAAATTGGTGGAAGACCAATCGCTCAAAGTATCCAACTCTAGCTTGCATAGCACAGGATGTGCTAGCATGGCCTGCTTCAACAGTTGCATCTGAGTCCGCATTCAGCACAGGATCTAGAGTGATCAGTGATTTCAGATGTAGCCTTACAATGGATTCAGTTGAGGCGCTTATCTGCCTCCAAGATTGGTTTCGAGCTTCTGCCGGTATACACGACTGCCCTCGTTCATTTACTTCTAGTATTTATCTTGCTAAAACTAATTTATTTTTATGTTTTGATTGCTAGGTCCTAACATAAATGTGAGCTCAGTAAATGAAATCAACTACAGTGATAATTTTGTGGTTAGTAAATTGCTTGTGCTCTTCTTATCATCTGTCTATTTAATTTTCTGAAAGAGAAAGATGTCTATTTATTCAGTATTTGCTTGATTGCTTGCAAGATCTCTTCCAGCTTTTCTCTTTCTATTTATCCAGTATTGAACAATGCCTATATGGGTTTGTTGTCCTACTTGCTAGCTTTCTATAAAATTGGAATATGAAGTTTCAATGTCTCTATCATGTATTCATCTTTATCTATAGAACCTGGACCTGGAGGATTCCATGGATGGACAGGATGGTGGAAGCTTGTGAATGCCCAAACAAAGGATCTGGATATTGATGGTTAGTAATCTATCATGAACTTGTATTATACTATTTATAATCTGAGCTAGTTCAACTCTTTTACAACATATGAGAAGCTCTAGATGTACAAAAGGAATAAGCCTCATTTCTGGTATTGCAATGCTTTGCTTTCTGAAATAAAACGATAGCCTAAAAATAGACTGTACTGCACTACTGCTAGATAAATGAAGAAAATTAGTAAAATCTGCAAATTTGTGTAGCACATGTTAGATGATTCTTGTATTCCTTAATCTCTGATTGTGAATACTATTGAGTGACTGCAGATTAATTCTGTTTTTCAAGCATGTTTTATATGTCAAATACTCAAATGCTTAGAACACCTACTGTGTTGATTCCTCTGTCTGTCTGCATATGCTCATGTCTTGATTCAGTTGTTGCCCATAAAACATAAATGCACCATTTCTTTTTCTGAGAGATATTGCAGGTTATTACCTTTTTAAAACAATTACTGTATATTTTCTTCCTGTTATTATACCATGATCATTCGATCTCTCCATCATGTTAACCTGCAGAATCTGGACCTGGGTGATTCAACGAACAGTGCAAGCTAGGGAACGCCAAATGATGCCCACTTTGATCTTGGAAGGCTGCATTTTGTTTGATCTCAATCTAATGAACCGGATATTTGGGTTGTTCAAATCGATTTTTGTGAATGATATGAGTACATGCATGTACTTAGTTTTAATTGAACTGGGTGCCAGTACCCAGTGATTGATGTTTGTACTTTTGAATGCAAAAGATTAAGTCATTTCGGAATGTTTGCATTGGGTA

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CDS seq

ATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAATAAGGAAATGCGGACACCCAACGCATTTTTTGGACTTGGCACTAACAGTGGTGAAGATATTGAGATGGGTGATGGTGATAGTGACTCTGAACAAGTTGGTCCTGTAGATGAGCATGTGAATCCAGTAATACAAGCTTTAACAAGGAAATTCAGATCTGAGGCTTGGAAAGAGTTTGTGCCGATACTCATTGATAATGAAGTTGGTGCAGGAAAATGTAAGCACTGTGATACAGAGATCCGTGCAAAGCGTGGAGCGGGAACAAGTTCATTGAGGATGCATTTGACAAGATGCAAGAAGCGAATTAGTGCTCTTAAGATTGTGGGAAATCTTGACTCTACACTTATGTCTCCTAATAGTGTAAGGTTAAAGAATTGGAGCTTTGATCCTAATGTTTCTAGAAAAGAGCTCATGCGAATGATTGTATTACATGAGTTGCCCTTCCAGTTTGTGGAGTATGATGGATTTAGAAGTTTTGCTGCTAGTCTTAACCCCTACTTCAAGATTATTTCAAGAACAACTATAAGGAATGATTGCATCGCTGCTTTTAAAGAGCAAAAGTTAGCAATGAAGGACATGTTCAAGGGTGCAAATTGTAGGTTCTCATTGACTGCAGATATATGGACTTCGAACCAAACAATGGGATACATGTGTGTGACATGTCATTTCATTGACACAGATTGGAGAGTACAGAAGAGGATTATAAAGTTCTTTGGAGTAAAGACACCTCATACTGGAGTGCAGATGTTCAATGCTATGCTCAGCTGCATTCAAGATTGGAATATCGCAGACAAAATATTCACACATGTCATCAATCTCATAGCCAAAGATGGGTTGAAGGTTATTGATTCTATTGTTTGCAACATCCGTGAAAGTGTGAAGTACATGGATAATTCCCTATCTCGCAAAGAAAAGTTTGAGGAGATCATTGCCCAAGAAGGGATCACATGCGAGTTGCATCCCACTGTGGATGTATGTACTCGTTGGAACTCCACATATCTAATTCTCAATGCAGCCTTCCCTTTCATGAGGGCTTATGCTTCATTGGCTGTTCAAGACAAAAATTACAAATATGCACCCTCTCCTGATCAGTGGGAAAGAGCAACCATAGTCTCTGGAATTTTGAAGGTGCTTTATGATGCAACTATGGTGGTGTCTGGATCTTTATATCCAACATCAAACCTTTATTTCCATGAGATGTGGAAAATCAAATTGGTCTTGGACAAGGAACGCTCTAACAATGACACTGAAGTGGCAAGTATGGTTCAAAAGATGAAGGACAAATTTGACAAGTATTGGCTTAAGTCTTACAAATATCTGTGCATTCCTGTCATTTTTGACCCAAGATTCAAATTCAAGTTTGTGGAATTTTGGCTTGGGCAAGCCTTTGGTGAAAATGCTAAAGAGAGGATTGACAAAGTTAAGAAGAGAATGAACATGTTGTTTAAGGAGTACTCTGATAAACTCAAGGATAGCAATGCTAACCCACTGCGCCAAGCTGAACATGTGATGGCTATCTCTGAAAATGATCCTATGGCTGATTGGCAAGTTGATACTGAATTGGATATTTACCTCAAAGAGAATCCTATTCAGGAATTTGGGAACAAATTTGACATTCTAAATTGGTGGAAGACCAATCGCTCAAAGTATCCAACTCTAGCTTGCATAGCACAGGATGTGCTAGCATGGCCTGCTTCAACAGTTGCATCTGAGTCCGCATTCAGCACAGGATCTAGAGTGATCAGTGATTTCAGATGTAGCCTTACAATGGATTCAGTTGAGGCGCTTATCTGCCTCCAAGATTGGTTTCGAGCTTCTGCCGGTCCTAACATAAATGTGAGCTCAGTAAATGAAATCAACTACAGTGATAATTTTGTGGTTAGTAAATTGCTTGTGCTCTTCTTATCATCTGTCTATTTAATTTTCTGA

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Protein seq

MEAPAGGGYLLGGQPARCSGGHSTGSNGEGFEGRPATSPPSSSWVSLTREHNKEMRTPNAFFGLGTNSGEDIEMGDGDSDSEQVGPVDEHVNPVIQALTRKFRSEAWKEFVPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRMHLTRCKKRISALKIVGNLDSTLMSPNSVRLKNWSFDPNVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADIWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFTHVINLIAKDGLKVIDSIVCNIRESVKYMDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNSTYLILNAAFPFMRAYASLAVQDKNYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKERSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFKFKFVEFWLGQAFGENAKERIDKVKKRMNMLFKEYSDKLKDSNANPLRQAEHVMAISENDPMADWQVDTELDIYLKENPIQEFGNKFDILNWWKTNRSKYPTLACIAQDVLAWPASTVASESAFSTGSRVISDFRCSLTMDSVEALICLQDWFRASAGPNINVSSVNEINYSDNFVVSKLLVLFLSSVYLIF

Function Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_03G0591300 OsZS97_03T0591300.1 Chr03 37399792 37403620 + makerRMon
CDS seq

ATGGAGGCACCGGCGGGCGGCGGCTACCTGCTTGGTGGCCAACCGGCGAGGTGCTCCGGAGGACACTCCACCGGCAGCAACGGCGAGGGTTTCGAAGGACGCCCGGCCACATCGCCACCTTCGTCCAGCTGGGTTTCTCTAACTCGTGAGCACAATAAGGAAATGCGGACACCCAACGCATTTTTTGGACTTGGCACTAACAGTGGTGAAGATATTGAGATGGGTGATGGTGATAGTGACTCTGAACAAGTTGGTCCTGTAGATGAGCATGTGAATCCAGTAATACAAGCTTTAACAAGGAAATTCAGATCTGAGGCTTGGAAAGAGTTTGTGCCGATACTCATTGATAATGAAGTTGGTGCAGGAAAATGTAAGCACTGTGATACAGAGATCCGTGCAAAGCGTGGAGCGGGAACAAGTTCATTGAGGATGCATTTGACAAGATGCAAGAAGCGAATTAGTGCTCTTAAGATTGTGGGAAATCTTGACTCTACACTTATGTCTCCTAATAGTGTAAGGTTAAAGAATTGGAGCTTTGATCCTAATGTTTCTAGAAAAGAGCTCATGCGAATGATTGTATTACATGAGTTGCCCTTCCAGTTTGTGGAGTATGATGGATTTAGAAGTTTTGCTGCTAGTCTTAACCCCTACTTCAAGATTATTTCAAGAACAACTATAAGGAATGATTGCATCGCTGCTTTTAAAGAGCAAAAGTTAGCAATGAAGGACATGTTCAAGGGTGCAAATTGTAGGTTCTCATTGACTGCAGATATATGGACTTCGAACCAAACAATGGGATACATGTGTGTGACATGTCATTTCATTGACACAGATTGGAGAGTACAGAAGAGGATTATAAAGTTCTTTGGAGTAAAGACACCTCATACTGGAGTGCAGATGTTCAATGCTATGCTCAGCTGCATTCAAGATTGGAATATCGCAGACAAAATATTCACACATGTCATCAATCTCATAGCCAAAGATGGGTTGAAGGTTATTGATTCTATTGTTTGCAACATCCGTGAAAGTGTGAAGTACATGGATAATTCCCTATCTCGCAAAGAAAAGTTTGAGGAGATCATTGCCCAAGAAGGGATCACATGCGAGTTGCATCCCACTGTGGATGTATGTACTCGTTGGAACTCCACATATCTAATTCTCAATGCAGCCTTCCCTTTCATGAGGGCTTATGCTTCATTGGCTGTTCAAGACAAAAATTACAAATATGCACCCTCTCCTGATCAGTGGGAAAGAGCAACCATAGTCTCTGGAATTTTGAAGGTGCTTTATGATGCAACTATGGTGGTGTCTGGATCTTTATATCCAACATCAAACCTTTATTTCCATGAGATGTGGAAAATCAAATTGGTCTTGGACAAGGAACGCTCTAACAATGACACTGAAGTGGCAAGTATGGTTCAAAAGATGAAGGACAAATTTGACAAGTATTGGCTTAAGTCTTACAAATATCTGTGCATTCCTGTCATTTTTGACCCAAGATTCAAATTCAAGTTTGTGGAATTTTGGCTTGGGCAAGCCTTTGGTGAAAATGCTAAAGAGAGGATTGACAAAGTTAAGAAGAGAATGAACATGTTGTTTAAGGAGTACTCTGATAAACTCAAGGATAGCAATGCTAACCCACTGCGCCAAGCTGAACATGTGATGGCTATCTCTGAAAATGATCCTATGGCTGATTGGCAAGTTGATACTGAATTGGATATTTACCTCAAAGAGAATCCTATTCAGGAATTTGGGAACAAATTTGACATTCTAAATTGGTGGAAGACCAATCGCTCAAAGTATCCAACTCTAGCTTGCATAGCACAGGATGTGCTAGCATGGCCTGCTTCAACAGTTGCATCTGAGTCCGCATTCAGCACAGGATCTAGAGTGATCAGTGATTTCAGATGTAGCCTTACAATGGATTCAGTTGAGGCGCTTATCTGCCTCCAAGATTGGTTTCGAGCTTCTGCCGGTCCTAACATAAATGTGAGCTCAGTAAATGAAATCAACTACAGTGATAATTTTGTGGTTAGTAAATTGCTTGTGCTCTTCTTATCATCTGTCTATTTAATTTTCTGA

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Protein seq

MEAPAGGGYLLGGQPARCSGGHSTGSNGEGFEGRPATSPPSSSWVSLTREHNKEMRTPNAFFGLGTNSGEDIEMGDGDSDSEQVGPVDEHVNPVIQALTRKFRSEAWKEFVPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRMHLTRCKKRISALKIVGNLDSTLMSPNSVRLKNWSFDPNVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADIWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFTHVINLIAKDGLKVIDSIVCNIRESVKYMDNSLSRKEKFEEIIAQEGITCELHPTVDVCTRWNSTYLILNAAFPFMRAYASLAVQDKNYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKERSNNDTEVASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFKFKFVEFWLGQAFGENAKERIDKVKKRMNMLFKEYSDKLKDSNANPLRQAEHVMAISENDPMADWQVDTELDIYLKENPIQEFGNKFDILNWWKTNRSKYPTLACIAQDVLAWPASTVASESAFSTGSRVISDFRCSLTMDSVEALICLQDWFRASAGPNINVSSVNEINYSDNFVVSKLLVLFLSSVYLIF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.9493185 8.178854 12.525571

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0822100 RBH 0.525793 0.492459 0.214415
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g60730 RBH 0.323276 0.311655 0.050182
Nipponbare | IRGSP 1.0 | RAP-db Os03g0822100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0040110 RBH 0.116787 0.988499 0.390523
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0039780 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0039860 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0040090 RBH 0.025388 0.020478 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0039660 RBH 1.263770 3.117448 8.529654
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0512100 SBH 10.659963 9.832671 20.1603985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0039410 SBH 0.000000 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0434400 RBH 0.106769 2.8915175 0.6327325
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0039980 SBH 0.0 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0039910 SBH 0.279247 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0039550 SBH 1.952004 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0039650 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0039710 SBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G039460 RBH 0.447863 0.986764 0.711282
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0039210 RBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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