Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0008300 | OGI:02002570 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:428477-431234 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAAGTTCTATTGACCTCTTCAAATGAACTTTTGAGATAAGATGACATCTTCAACGTCAATAGAACCCTAGGGAAAAAAAAATAATATCCAAATTAAAATAATTTGTTAGCACATATATTTATCTTTGAAGAAACTGGTCAGCATACCAGTAGAAGTTGGGCATAGCTGCTAATTGCTTCACATTCTTGATGTTCTTCCACATCAGTTTGCATGTTTTCCTCCTCTGCCTTTTCTTCAGGCTGCATAACAGATTTGAGAAGTGGCTCAATATATAGTTCTCAATATATATAGCTGCATAACAGATTTGAGTAGTCGCTCAAATATATTTACCTTTCTCTTTTTTGTTTTTTCAGTTTATCAATCCAATTTGTTTTCCGTTTTGTTACACGTTTCCGGCTCTCCTTTTTCTTCAGACCAGAGACATGTGCCAAGTTCTGAGCTAACTGGGATGTTGACTGATCATTCGACTTTGCAATGCCATCACTGTAAGTTTGTTTTATTTTGTCCTCAACTTTTTTACTAACGGCATGAAGTGCTTCTTCCACAAGCAAGTAACATTCTTCAAAGTCTGCAGCTCTGGAAGCCAAAGGAAGAAATTGCTGGTACAGATATCTGTACCTAAGAGTAGTACTCAGCTTGGGGTCTTCCACTATTTGTCTGCCATGCATATCTTGAATAGCTCCACATTTTGCTTCTCGAGTCCAACGCTTCAATACATATTTTTCAGGCAACAATTTAATGTTCACTAAATCAAGAGCTTTCAAGGCATGTCTACACAGTAGACCTATTCTCTCAAACAATCGACAACTACACGACACGGTCTGATCAAAAGGGTTGGCAGTCAACTTGTGCTCATCTTCAAGTATGAACTGATCATCAAGTGAGCCAATTGCAATTATGAAATCATTACTTCCATTTGATCCTTTCGTATAGGCAGCCATGGATTTCTTTTTTTTCGCCGGGCCGGCGAATAGCCGGCCGATGTATATTAAGAGTAAGAAAGGGAATGTACAAGGTAGCGCGGTGCGTCAATGCACCACCATTTCAGACATAAAATGAAAGCTAAAATCTCACAGAATGAGTTGCTACAGAGTGACACATGGGGCTAACAAGACCTGCAGCTATCCAAGTCTCCCATTCATCCCCCATGGCGGAACAGCCATGGATTTCTCATATTCGGCTTGGAAGACTTCAAATAAAGCAGGTGTGTAAAGCTTACTTGCCTGTACCAAAATAGGTGTCATCATCATAATTCTTGGCAAATTCTTTCTTGATTCATATTCAGATTGCAATTCCTTCTCTCTCTTTTCTTCAACAACACGCTCTACACGATTAAGGAACCTGCCGATGTCAAGATCTGATTTCTAATGACCTTTCAAGTTACTATTCAAACTTTCACTTAATTGTGTGCTTCGCATCCCTATTGTGAAAACATCTGACATGTAGCACTCAGCCCACTTTTCTTTTAAATTGTATATGCTATCCAACCAAGTCACTTTACGCACCTTTTGTCTCATGGCATCAAATACTTCTTCAAATTCTTCTTTTTCCTCATACTCATACATACATGCACTGAAATCTGCTAGGATACTTGAACCTTCTGTTTGTTGAGGACTCAAATGCTTTACTGCATTTTGTGATATGTGCCAAGTACATAAACCATGCCATGCACCAGTGAATACTTCAGACACAGCCTTTCCCATTGCAATGTCTTGGTCTGTAAAAATGGTTTGAGGTTGCTTTTGATTATGGGCTGATAAAAATGTATTGAACATCCACTTGAATGATTCAAATGTCTCATCATACATCAAAGCTGCACCAAAAACCACTGTCTCTCTAAAATGGTTGAAGCCAACAAACATACCAAAAGGTCTACTTTCTTTATTTGTCCCGAATGTAGTGTCGAAGGTGATGACATCACCAAAGTGAGCATAATCAGCAATCATCCTAGCATCTGCCCAAAATATATTAGCTATTTGTTCTTCGCAATCCAATTGCACTGCATAGTGAAATGAGGGATTTTCCACAATTTTATCTTGGAAGTACTTTAGTAAACTTCCTGCCTCACCATAAAGTAAGTCCCTTTGGCGCCTAGAACGCAAATAATTCTTATGATCACGCTGTGTGTAACCAAGATTAGCTGACCCACCAACATGCCGACCAAGAAACTCATGTGCTGCTTTAGGTGTAATACCAGAATCATACGCCACCTCAATTTCGACTGCTTGGTGTTTAGAAATGTTCCTTTGTGATGGCATCAAACGGCTTGTTTGTGGAGTTTGAAGAAGATGGCTGTGTTCTACAGCTAAGTCATGAACCTTGTATGTCATTGTTTCCCTGAGTAAAGTGATGCCCATGCGAACTTGGCAACCAGTTCGAGTATGAGTTCGATTACGTTTTGCTACAGCATATTTCTTTTCTTCTGCTCTAGAACCCTGATTTGAACAAACAAACCTACTGGATGTTACTAACTGATCAAGATCACTTTTGTTAGTGTAATTCTTTCGAACATCAAAGCCAATACGACCACCATATTTGACCCAAAAATCCCAAGCTTCTTCATAGGAATTAAATGTCATACCAATTTGAGGCATCCAACAGGGAGGTTTAGTAGATCTGTTACATTACAGTATAGAGGAATAAAAAGTTTGATGCATGAACAAAACAGGAAGAAAGAAGACAAAAATCAGAAGACAAAGGATCCTATCGCGATCTGTACCTCTCCAGGTTTTGCTCCATGGCCTTCTCAACGGTCAT
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| CDS seq | ATGACCGTTGAGAAGGCCATGGAGCAAAACCTGGAGAGATCTACTAAACCTCCCTGTTGGATGCCTCAAATTGGTATGACATTTAATTCCTATGAAGAAGCTTGGGATTTTTGGGTCAAATATGGTGGTCGTATTGGCTTTGATGTTCGAAAGAATTACACTAACAAAAGTGATCTTGATCAGTTAGTAACATCCAGTAGGTTTGTTTGTTCAAATCAGGGTTCTAGAGCAGAAGAAAAGAAATATGCTGTAGCAAAACGTAATCGAACTCATACTCGAACTGGTTGCCAAGTTCGCATGGGCATCACTTTACTCAGGGAAACAATGACATACAAGGTTCATGACTTAGCTGTAGAACACAGCCATCTTCTTCAAACTCCACAAACAAGCCGTTTGATGCCATCACAAAGGAACATTTCTAAACACCAAGCAGTCGAAATTGAGGTGGCGTATGATTCTGGTATTACACCTAAAGCAGCACATGAGTTTCTTGGTCGGCATGTTGGTGGGTCAGCTAATCTTGGTTACACACAGCGTGATCATAAGAATTATTTGCGTTCTAGGCGCCAAAGGGACTTACTTTATGGTGAGGCAGGAAGTTTACTAAAGTACTTCCAAGATAAAATTGTGGAAAATCCCTCATTTCACTATGCAGTGCAATTGGATTGCGAAGAACAAATAGCTAATATATTTTGGGCAGATGCTAGGATGATTGCTGATTATGCTCACTTTGGTGATGTCATCACCTTCGACACTACATTCGGGACAAATAAAGAAAGTAGACCTTTTGGTATGTTTGTTGGCTTCAACCATTTTAGAGAGACAGTGGTTTTTGGTGCAGCTTTGATGTATGATGAGACATTTGAATCATTCAAGTGGATGTTCAATACATTTTTATCAGCCCATAATCAAAAGCAACCTCAAACCATTTTTACAGACCAAGACATTGCAATGGGAAAGGCTGTGTCTGAAGTATTCACTGGTGCATGGCATGGTTTATGTACTTGGCACATATCACAAAATGCAGTAAAGCATTTGAGTCCTCAACAAACAGAAGGTTCAAGTATCCTAGCAGATTTCAGTGCATGTATGTATGAGTATGAGGAAAAAGAAGAATTTGAAGAAGTATTTGATGCCATGAGACAAAAGGTGCGTAAAGTGACTTGGTTGGATAGCATATACAATTTAAAAGAAAAGTGGGCTGAGTGCTACATGTCAGATGTTTTCACAATAGGGATGCGAAGCACACAATTAAGTGAAAGTTTGAATAATCTTGACATCGGCAGGTTCCTTAATCGTGTAGAGCGTGTTGTTGAAGAAAAGAGAGAGAAGGAATTGCAATCTGAATATGAATCAAGAAAGAATTTGCCAAGAATTATGATGATGACACCTATTTTGGTACAGGCAAGTAAGCTTTACACACCTGCTTTATTTGAAGTCTTCCAAGCCGAATATGAGAAATCCATGGCTGTTCCTAATGATTTCATAATTGCAATTGGCTCACTTGATGATCAGTTCATACTTGAAGATGAGCACAAGTTGACTGCCAACCCTTTTGATCAGACCGTGTCGTGTAGTTGTCGATTGTTTGAGAGAATAGGTCTACTGTGTAGACATGCCTTGAAAGCTCTTGATTTAGTGAACATTAAATTGTTGCCTGAAAAATATGTATTGAAGCGTTGGACTCGAGAAGCAAAATGTGGAGCTATTCAAGATATGCATGGCAGACAAATAGTGGAAGACCCCAAGCTGAGTACTACTCTTAGGTACAGATATCTGTACCAGCAATTTCTTCCTTTGGCTTCCAGAGCTGCAGACTTTGAAGAATGTTACTTGCTTGTGGAAGAAGCACTTCATGCCGTTAGTAAAAAAGTTGAGGACAAAATAAAACAAACTTACAGTGATGGCATTGCAAAGTCGAATGATCAGTCAACATCCCAGTTAGCTCAGAACTTGGCACATAACTATATATTGAGCCACTTCTCAAATCTGTTATGCAGCCTGAAGAAAAGGCAGAGGAGGAAAACATGCAAACTGATGTGGAAGAACATCAAGAATGTGAAGCAATTAGCAGCTATGCCCAACTTCTACTGGGTTCTATTGACGTTGAAGATGTCATCTTATCTCAAAAGTTCATTTGAAGAGGTCAATAGAACTTAG
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| Protein seq | MTVEKAMEQNLERSTKPPCWMPQIGMTFNSYEEAWDFWVKYGGRIGFDVRKNYTNKSDLDQLVTSSRFVCSNQGSRAEEKKYAVAKRNRTHTRTGCQVRMGITLLRETMTYKVHDLAVEHSHLLQTPQTSRLMPSQRNISKHQAVEIEVAYDSGITPKAAHEFLGRHVGGSANLGYTQRDHKNYLRSRRQRDLLYGEAGSLLKYFQDKIVENPSFHYAVQLDCEEQIANIFWADARMIADYAHFGDVITFDTTFGTNKESRPFGMFVGFNHFRETVVFGAALMYDETFESFKWMFNTFLSAHNQKQPQTIFTDQDIAMGKAVSEVFTGAWHGLCTWHISQNAVKHLSPQQTEGSSILADFSACMYEYEEKEEFEEVFDAMRQKVRKVTWLDSIYNLKEKWAECYMSDVFTIGMRSTQLSESLNNLDIGRFLNRVERVVEEKREKELQSEYESRKNLPRIMMMTPILVQASKLYTPALFEVFQAEYEKSMAVPNDFIIAIGSLDDQFILEDEHKLTANPFDQTVSCSCRLFERIGLLCRHALKALDLVNIKLLPEKYVLKRWTREAKCGAIQDMHGRQIVEDPKLSTTLRYRYLYQQFLPLASRAADFEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHNYILSHFSNLLCSLKKRQRRKTCKLMWKNIKNVKQLAAMPNFYWVLLTLKMSSYLKSSFEEVNRT |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0008300 | OsMH63_02T0008300.1 | Chr02 | 428477 | 431234 | - | maker | ||
| CDS seq | ATGACCGTTGAGAAGGCCATGGAGCAAAACCTGGAGAGATCTACTAAACCTCCCTGTTGGATGCCTCAAATTGGTATGACATTTAATTCCTATGAAGAAGCTTGGGATTTTTGGGTCAAATATGGTGGTCGTATTGGCTTTGATGTTCGAAAGAATTACACTAACAAAAGTGATCTTGATCAGTTAGTAACATCCAGTAGGTTTGTTTGTTCAAATCAGGGTTCTAGAGCAGAAGAAAAGAAATATGCTGTAGCAAAACGTAATCGAACTCATACTCGAACTGGTTGCCAAGTTCGCATGGGCATCACTTTACTCAGGGAAACAATGACATACAAGGTTCATGACTTAGCTGTAGAACACAGCCATCTTCTTCAAACTCCACAAACAAGCCGTTTGATGCCATCACAAAGGAACATTTCTAAACACCAAGCAGTCGAAATTGAGGTGGCGTATGATTCTGGTATTACACCTAAAGCAGCACATGAGTTTCTTGGTCGGCATGTTGGTGGGTCAGCTAATCTTGGTTACACACAGCGTGATCATAAGAATTATTTGCGTTCTAGGCGCCAAAGGGACTTACTTTATGGTGAGGCAGGAAGTTTACTAAAGTACTTCCAAGATAAAATTGTGGAAAATCCCTCATTTCACTATGCAGTGCAATTGGATTGCGAAGAACAAATAGCTAATATATTTTGGGCAGATGCTAGGATGATTGCTGATTATGCTCACTTTGGTGATGTCATCACCTTCGACACTACATTCGGGACAAATAAAGAAAGTAGACCTTTTGGTATGTTTGTTGGCTTCAACCATTTTAGAGAGACAGTGGTTTTTGGTGCAGCTTTGATGTATGATGAGACATTTGAATCATTCAAGTGGATGTTCAATACATTTTTATCAGCCCATAATCAAAAGCAACCTCAAACCATTTTTACAGACCAAGACATTGCAATGGGAAAGGCTGTGTCTGAAGTATTCACTGGTGCATGGCATGGTTTATGTACTTGGCACATATCACAAAATGCAGTAAAGCATTTGAGTCCTCAACAAACAGAAGGTTCAAGTATCCTAGCAGATTTCAGTGCATGTATGTATGAGTATGAGGAAAAAGAAGAATTTGAAGAAGTATTTGATGCCATGAGACAAAAGGTGCGTAAAGTGACTTGGTTGGATAGCATATACAATTTAAAAGAAAAGTGGGCTGAGTGCTACATGTCAGATGTTTTCACAATAGGGATGCGAAGCACACAATTAAGTGAAAGTTTGAATAATCTTGACATCGGCAGGTTCCTTAATCGTGTAGAGCGTGTTGTTGAAGAAAAGAGAGAGAAGGAATTGCAATCTGAATATGAATCAAGAAAGAATTTGCCAAGAATTATGATGATGACACCTATTTTGGTACAGGCAAGTAAGCTTTACACACCTGCTTTATTTGAAGTCTTCCAAGCCGAATATGAGAAATCCATGGCTGTTCCTAATGATTTCATAATTGCAATTGGCTCACTTGATGATCAGTTCATACTTGAAGATGAGCACAAGTTGACTGCCAACCCTTTTGATCAGACCGTGTCGTGTAGTTGTCGATTGTTTGAGAGAATAGGTCTACTGTGTAGACATGCCTTGAAAGCTCTTGATTTAGTGAACATTAAATTGTTGCCTGAAAAATATGTATTGAAGCGTTGGACTCGAGAAGCAAAATGTGGAGCTATTCAAGATATGCATGGCAGACAAATAGTGGAAGACCCCAAGCTGAGTACTACTCTTAGGTACAGATATCTGTACCAGCAATTTCTTCCTTTGGCTTCCAGAGCTGCAGACTTTGAAGAATGTTACTTGCTTGTGGAAGAAGCACTTCATGCCGTTAGTAAAAAAGTTGAGGACAAAATAAAACAAACTTACAGTGATGGCATTGCAAAGTCGAATGATCAGTCAACATCCCAGTTAGCTCAGAACTTGGCACATAACTATATATTGAGCCACTTCTCAAATCTGTTATGCAGCCTGAAGAAAAGGCAGAGGAGGAAAACATGCAAACTGATGTGGAAGAACATCAAGAATGTGAAGCAATTAGCAGCTATGCCCAACTTCTACTGGGTTCTATTGACGTTGAAGATGTCATCTTATCTCAAAAGTTCATTTGAAGAGGTCAATAGAACTTAG
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| Protein seq | MTVEKAMEQNLERSTKPPCWMPQIGMTFNSYEEAWDFWVKYGGRIGFDVRKNYTNKSDLDQLVTSSRFVCSNQGSRAEEKKYAVAKRNRTHTRTGCQVRMGITLLRETMTYKVHDLAVEHSHLLQTPQTSRLMPSQRNISKHQAVEIEVAYDSGITPKAAHEFLGRHVGGSANLGYTQRDHKNYLRSRRQRDLLYGEAGSLLKYFQDKIVENPSFHYAVQLDCEEQIANIFWADARMIADYAHFGDVITFDTTFGTNKESRPFGMFVGFNHFRETVVFGAALMYDETFESFKWMFNTFLSAHNQKQPQTIFTDQDIAMGKAVSEVFTGAWHGLCTWHISQNAVKHLSPQQTEGSSILADFSACMYEYEEKEEFEEVFDAMRQKVRKVTWLDSIYNLKEKWAECYMSDVFTIGMRSTQLSESLNNLDIGRFLNRVERVVEEKREKELQSEYESRKNLPRIMMMTPILVQASKLYTPALFEVFQAEYEKSMAVPNDFIIAIGSLDDQFILEDEHKLTANPFDQTVSCSCRLFERIGLLCRHALKALDLVNIKLLPEKYVLKRWTREAKCGAIQDMHGRQIVEDPKLSTTLRYRYLYQQFLPLASRAADFEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHNYILSHFSNLLCSLKKRQRRKTCKLMWKNIKNVKQLAAMPNFYWVLLTLKMSSYLKSSFEEVNRT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0202800 | SBH | 0.969293 | 0.639478 | 4.693256 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g01860 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0202800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0012530 | SBH | 0.493515 | 0.000000 | 4.647863 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0011520 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012550 | SBH | 0.529991 | 1.440129 | 5.804086 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012300 | SBH | 6.466052 | 5.628856 | 13.510058 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0083200 | RBH | 0 | 0.029045 | 0.030088 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0012100 | SBH | 0.137485 | 0.000000 | 1.091263 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0008300 | RBH | 0 | 0 | 0.007904 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0012660 | SBH | 0.080757 | 0.164579 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004920 | SBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0012630 | SBH | 0.369727 | 4.434485 | 6.849563 |
