Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0631700 | OGI:01113770 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:40110189-40113387 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGGGGCTTATGGCATCGTAATGCCTATCAGCAAAACTGTACCAAAGTAGTAGCAAAAGTAGACATTCATAGCTTGATAGCTTCAGACTCAATGCTGTACACTATAGTTCACCATAATAAGTAGTACCATACTAGTAAATACTAAGAGCATCACCATAACTCCATAAGTAATAGTACTAACTACTAAGTAGTACCAAAGTAGTTCACATAAGGTATACAATCAAGCCAAAAGATACACTTATATGACTACTGATCACATATTACCAATACAGTCATCCCAAAGGCCAGCATGTTCAGATTCAATCACCAAAAACTCCAGCTCTCCAATCAGCAACATGCTCAGCTTCAAACACTATTCATTGCCTGACCCTAAAAAGAACATAACATTCAGTTAATACAATGTGGTGCTCCTTAACTCTCTCAAAATCCAAAGTGGAACCAACAGATTGTTCATTTAAAGATTGCAGGTCCAAAATATATTTTTAAATGCAACACATAAATATGTAATTAACCTCCTCATCATTGTCAGTTTTAGCACCATCTTTATCCTCTATCTGTACATCCAGCTCATCAAGAATTGTTGATATCTTGTCCTTAAATGGTCCTGTAAATAAAATTGACAAAATATAAACACAGTCTAGAAATGGCAGATTATATAAATAGCGAAATGAAGATAAACAAGCAGTTACCTTTTCTAGATGCTCTTATCCAATCCTTGGTACAAACTAGAGCCTCAATCATCTCAGGATCTAGAGAACTGCGAAAAGGACCAACAACACGACCACCAGCACTAAACGCTGACTCTGAAGCAACGGTAGAGATTTGAACAGCCATTACATCACGCGCGAGTGTTGAGAGGATAGGAAAGGTCATTTGGTTGCTCTTCCACCATGCCAGTATGTCAAATTCTACACCTTCACCTGTTGGATCAACCCAACGAATTGGCTTCTCTTTCATGTAGACATCCAATTCATTTATATCGTCTTCTTTATTTGCAGCTGCATCATCATACAAGAATTTCTCGATTTCATTGTGACCCAAAGAAGTATTACCATGTGGCTGAGAATTTTCACTTGATCCTGCAGCGGTAGGTTTCGAAGACCTTGCAACACAACTCTTGTAAGCCCGGAAAAGTTTATCGATAGTAGCCAAGACACGCTTAAATTCCTCTTCATACTTGTCAGGGTAAATCTTCTGTAGAAAAAAAATCACTAGCTTTTGCTTGTATCTAGGATCAAGAAAGCAAGCCACAGCAAGAGCTAGGTTGGACTTGTCCCAATATTTGTCATATTTGAGTTGCATGGCCACAGCCATAGAAGCAATGGAGACATCAGCACTTGCACACCATTCTCGAAGTGCTAACTTAATCTCACAAAACTTCCACCAAAACAAGTTTGCAGTTGGATATAGACAACCGGAAAATAACAATGTGGCATAATTGAATTTCTCCAAACAATTGCATAGTGATTCTGCCATACCCCATTCTTCAGCACTTGGTGCACACCTTTGATATCTATCCTCATCTAAGAATAAAAGCCTTTCAAAAGCACCCCTGTAGTAAATAGCTTGTTTCAACATGTCATATGTAGAGTTCCACCTTGTAGGCACATCAAGGGGTAGCCCAGAATTGTTGTTCAAGTCACATTCTACAGCACACTTTTGAAATTCCTCCCATTGCAACGTAGAATTCTTCACAATACCAATAGTAGTCCTAATATTCTGAATTGTATGTGCAATGATTTTCAATCCATCTTGAGCCACAAGATTTAATATGTGACATAAACATCTCACATGAAAGAAAGCACCATCACACATCAATGGAGGGACCTTACTGATATTAAACAGCTTGTTAAGCTCTATCACAACTTCTCTAGCACATTTATCATTTGATGAAGCATTGTCTAGTGTGAGAGCAAATAATTTTTTCTCAATATTCATAGACATTACTCCCTTGACAAATGCATTTGCTAGCCTTGTTCCTGTATGTTTCCCATCTATATGAATGAACTTAAGAATTCTCTTTTGCATCAGCCAATTTTCATCAATCCAATGAGCAGTGATGCACATATAAGCTTAGTTCTGATTTGATGTCCACATATCCATGGTTGTAGAAATTCGACTAGAAACAGATTTCAGCTCATCATACAAAATTCTCTTTCTAACTTCAAATATCTCTAATATAGCTTTACTAGTGGTAATGCGACACTTGAATTCAAAACTAGGCCGAAGAGAGTGGATGAACTCATTGAAATACACATGATCAACCATAGAAAATGGATATTCATGCATAATAACAGCTATATACCACTTTTCCAAGCTTACTTCAGGATCATACCTGAAAGTCTGAACTTCACCCTTCACCTGAAGTTCTTGCTGGCCTTGTTTCAATGAGTGAATACGATTCAAATGATTCCATAAGTGTTTTGTGCCATTTACTGTCTCTGCTCCAAACACTCTACCACATTTTTTGCATTTTGCTTTACGTTGTTGCTCTTCCACACCAGTAACTTTGTTCTTGGCCTTGTCAGTGTACTTAATGAAATAGTCCCAAACCTTCGAGGTACACTTCTTCTGCCTCTTTGCTACCGGTTCAACTTCTCCTGTGAATTCTCCATCTTCTTCATCGGGAATAACAACAGGTTCTGAACTTCCACCTCCACCTCCAGTGGCTGTGGTTGCATCATTTAGTACCAATGCATTCGGTGCCAATGCGGAGTGACCAGTACCAACAGCTACGGTACCAGCCGGAGATGCACCTGTGCTTGCACACATACTAGTGTTTGCATCACCACTAGCCATTCTATCCTAATCCTACAGCCAAACAGCAAAAGTAAAATAAGAAAAAAAATCCTTCCAAGTTCTAACGTGATGTTGAGAAAGGGCAATGAAAAATTGAAACTTTGGCTAACCTGGATGGCTGGATGAGTCGCTGAGTGTTGACTTGACTACCCAAGAAGATGACGAGGTGGCGCGACGTCCTTCGGCTCTCAGCGTTGAGGAGCCAAAAGAGGCAAGGGGCCAGGTGGGGCCTTGCGGTGGTGGTCGGCGCGGCGGCAGTCTGACGGTCGTCGGCTTGTCGCACACCCACGCGGCGACGTGCGACAGCGGCCGGTGGTCGGTGGGCGTGGCCGCGTAGCCACTTGGTGGTCGGCGAACTGCGAAGGCACGGCGGCGGTGCTGGAGCCTGGATGCACGCAT
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| CDS seq | ATGCGTGCATCCAGGCTCCAGCACCGCCGCCGTGCCTTCGCAGTTCGCCGACCACCAAGTGGCTACGCGGCCACGCCCACCGACCACCGGCCGCTGTCGCACGTCGCCGCGTGGGTGTGCGACAAGCCGACGACCGTCAGACTGCCGCCGCGCCGACCACCACCGCAAGGCCCCACCTGGCCCCTTGCCTCTTTTGGCTCCTCAACGCTGAGAGCCGAAGGACGTCGCGCCACCTCGTCATCTTCTTGGGTAGTCAAGTCAACACTCAGCGACTCATCCAGCCATCCAGGTGCATCTCCGGCTGGTACCGTAGCTGTTGGTACTGGTCACTCCGCATTGGCACCGAATGCATTGGTACTAAATGATGCAACCACAGCCACTGGAGGTGGAGGTGGAAGTTCAGAACCTGTTGTTATTCCCGATGAAGAAGATGGAGAATTCACAGGAGAAGTTGAACCGGTAGCAAAGAGGCAGAAGAAGTGTACCTCGAAGGTTTGGGACTATTTCATTAAGTACACTGACAAGGCCAAGAACAAAGTTACTGGTGTGGAAGAGCAACAACGTAAAGCAAAATGCAAAAAATGTGGTAGAGTGTTTGGAGCAGAGACAGTAAATGGCACAAAACACTTATGGAATCATTTGAATCGTATTCACTCATTGAAACAAGGCCAGCAAGAACTTCAGGTGAAGGGTGAAGTTCAGACTTTCAGGTATGATCCTGAAGTAAGCTTGGAAAAGTGGTATATAGCTGTTATTATGCATGAATATCCATTTTCTATGGTTGATCATGTGTATTTCAATGAGTTCATCCACTCTCTTCGGCCTAGTTTTGAATTCAAGTGTCGCATTACCACTAGTAAAGCTATATTAGAGATATTTGAAGTTAGAAAGAGAATTTTGTATGATGAGCTGAAATCTGTTTCTACTTATATGTGCATCACTGCTCATTGGATTGATGAAAATTGGCTGATGCAAAAGAGAATTCTTAAGTTCATTCATATAGATGGGAAACATACAGGAACAAGGCTAGCAAATGCATTTGTCAAGGGAGTAATGTCTATGAATATTGAGAAAAAATTATTTGCTCTCACACTAGACAATGCTTCATCAAATGATAAATGTGCTAGAGAAGTTGTGATAGAGCTTAACAAGCTGTTTAATATCAGTAAGGTCCCTCCATTGATGTGTGATGGTGCTTTCTTTCATGTGAGATGTTTATGTCACATATTAAATCTTGTGGCTCAAGATGGATTGAAAATCATTGCACATACAATTCAGAATATTAGGACTACTATTGGTATTGTGAAGAATTCTACGTTGCAATGGGAGGAATTTCAAAAGTGTGCTGTAGAATGTGACTTGAACAACAATTCTGGGCTACCCCTTGATGTGCCTACAAGGTGGAACTCTACATATGACATGTTGAAACAAGCTATTTACTACAGGGGTGCTTTTGAAAGGCTTTTATTCTTAGATGAGGATAGATATCAAAGGTGTGCACCAAGTGCTGAAGAATGGGGTATGGCAGAATCACTATGCAATTGTTTGGAGAAATTCAATTATGCCACATTGTTATTTTCCGGTTGTCTATATCCAACTGCAAACTTGTTTTGGTGGAAGTTTTGTGAGATTAAGTTAGCACTTCGAGAATGGTGTGCAAGTGCTGATGTCTCCATTGCTTCTATGGCTGTGGCCATGCAACTCAAATATGACAAATATTGGGACAAGTCCAACCTAGCTCTTGCTAAGATTTACCCTGACAAGTATGAAGAGGAATTTAAGCGTGTCTTGGCTACTATCGATAAACTTTTCCGGGCTTACAAGAGTTGTGTTGCAAGGTCTTCGAAACCTACCGCTGCAGGATCAAGTGAAAATTCTCAGCCACATGGTAATACTTCTTTGGGTCACAATGAAATCGAGAAATTCTTGTATGATGATGCAGCTGCAAATAAAGAAGACGATATAAATGAATTGGATGTCTACATGAAAGAGAAGCCAATTCGTTGGGTTGATCCAACAGGTGAAGGTGTAGAATTTGACATACTGGCATGGTGGAAGAGCAACCAAATGACCTTTCCTATCCTCTCAACACTCGCGCGTGATGTAATGGCTGTTCAAATCTCTACCGTTGCTTCAGAGTCAGCGTTTAGTGCTGGTGGTCGTGTTGTTGGTCCTTTTCGCAGTTCTCTAGATCCTGAGATGATTGAGGCTCTAGTTTGTACCAAGGATTGGATAAGAGCATCTAGAAAAGGACCATTTAAGGACAAGATATCAACAATTCTTGATGAGCTGGATGTACAGATAGAGGATAAAGATGGTGCTAAAACTGACAATGATGAGGAGTGTACAGCATTGAGTCTGAAGCTATCAAGCTATGAATGTCTACTTTTGCTACTACTTTGGTACAGTTTTGCTGATAGGCATTACGATGCCATAAGCCCCTAA
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| Protein seq | MRASRLQHRRRAFAVRRPPSGYAATPTDHRPLSHVAAWVCDKPTTVRLPPRRPPPQGPTWPLASFGSSTLRAEGRRATSSSSWVVKSTLSDSSSHPGASPAGTVAVGTGHSALAPNALVLNDATTATGGGGGSSEPVVIPDEEDGEFTGEVEPVAKRQKKCTSKVWDYFIKYTDKAKNKVTGVEEQQRKAKCKKCGRVFGAETVNGTKHLWNHLNRIHSLKQGQQELQVKGEVQTFRYDPEVSLEKWYIAVIMHEYPFSMVDHVYFNEFIHSLRPSFEFKCRITTSKAILEIFEVRKRILYDELKSVSTYMCITAHWIDENWLMQKRILKFIHIDGKHTGTRLANAFVKGVMSMNIEKKLFALTLDNASSNDKCAREVVIELNKLFNISKVPPLMCDGAFFHVRCLCHILNLVAQDGLKIIAHTIQNIRTTIGIVKNSTLQWEEFQKCAVECDLNNNSGLPLDVPTRWNSTYDMLKQAIYYRGAFERLLFLDEDRYQRCAPSAEEWGMAESLCNCLEKFNYATLLFSGCLYPTANLFWWKFCEIKLALREWCASADVSIASMAVAMQLKYDKYWDKSNLALAKIYPDKYEEEFKRVLATIDKLFRAYKSCVARSSKPTAAGSSENSQPHGNTSLGHNEIEKFLYDDAAANKEDDINELDVYMKEKPIRWVDPTGEGVEFDILAWWKSNQMTFPILSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLDPEMIEALVCTKDWIRASRKGPFKDKISTILDELDVQIEDKDGAKTDNDEECTALSLKLSSYECLLLLLLWYSFADRHYDAISP |
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| Function | Putative AC transposase [UniProtKB/Swiss-Prot:P08770] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0631700 | OsMH63_01T0631700.1 | Chr01 | 40110189 | 40113387 | - | maker | ||
| CDS seq | ATGCGTGCATCCAGGCTCCAGCACCGCCGCCGTGCCTTCGCAGTTCGCCGACCACCAAGTGGCTACGCGGCCACGCCCACCGACCACCGGCCGCTGTCGCACGTCGCCGCGTGGGTGTGCGACAAGCCGACGACCGTCAGACTGCCGCCGCGCCGACCACCACCGCAAGGCCCCACCTGGCCCCTTGCCTCTTTTGGCTCCTCAACGCTGAGAGCCGAAGGACGTCGCGCCACCTCGTCATCTTCTTGGGTAGTCAAGTCAACACTCAGCGACTCATCCAGCCATCCAGGTGCATCTCCGGCTGGTACCGTAGCTGTTGGTACTGGTCACTCCGCATTGGCACCGAATGCATTGGTACTAAATGATGCAACCACAGCCACTGGAGGTGGAGGTGGAAGTTCAGAACCTGTTGTTATTCCCGATGAAGAAGATGGAGAATTCACAGGAGAAGTTGAACCGGTAGCAAAGAGGCAGAAGAAGTGTACCTCGAAGGTTTGGGACTATTTCATTAAGTACACTGACAAGGCCAAGAACAAAGTTACTGGTGTGGAAGAGCAACAACGTAAAGCAAAATGCAAAAAATGTGGTAGAGTGTTTGGAGCAGAGACAGTAAATGGCACAAAACACTTATGGAATCATTTGAATCGTATTCACTCATTGAAACAAGGCCAGCAAGAACTTCAGGTGAAGGGTGAAGTTCAGACTTTCAGGTATGATCCTGAAGTAAGCTTGGAAAAGTGGTATATAGCTGTTATTATGCATGAATATCCATTTTCTATGGTTGATCATGTGTATTTCAATGAGTTCATCCACTCTCTTCGGCCTAGTTTTGAATTCAAGTGTCGCATTACCACTAGTAAAGCTATATTAGAGATATTTGAAGTTAGAAAGAGAATTTTGTATGATGAGCTGAAATCTGTTTCTACTTATATGTGCATCACTGCTCATTGGATTGATGAAAATTGGCTGATGCAAAAGAGAATTCTTAAGTTCATTCATATAGATGGGAAACATACAGGAACAAGGCTAGCAAATGCATTTGTCAAGGGAGTAATGTCTATGAATATTGAGAAAAAATTATTTGCTCTCACACTAGACAATGCTTCATCAAATGATAAATGTGCTAGAGAAGTTGTGATAGAGCTTAACAAGCTGTTTAATATCAGTAAGGTCCCTCCATTGATGTGTGATGGTGCTTTCTTTCATGTGAGATGTTTATGTCACATATTAAATCTTGTGGCTCAAGATGGATTGAAAATCATTGCACATACAATTCAGAATATTAGGACTACTATTGGTATTGTGAAGAATTCTACGTTGCAATGGGAGGAATTTCAAAAGTGTGCTGTAGAATGTGACTTGAACAACAATTCTGGGCTACCCCTTGATGTGCCTACAAGGTGGAACTCTACATATGACATGTTGAAACAAGCTATTTACTACAGGGGTGCTTTTGAAAGGCTTTTATTCTTAGATGAGGATAGATATCAAAGGTGTGCACCAAGTGCTGAAGAATGGGGTATGGCAGAATCACTATGCAATTGTTTGGAGAAATTCAATTATGCCACATTGTTATTTTCCGGTTGTCTATATCCAACTGCAAACTTGTTTTGGTGGAAGTTTTGTGAGATTAAGTTAGCACTTCGAGAATGGTGTGCAAGTGCTGATGTCTCCATTGCTTCTATGGCTGTGGCCATGCAACTCAAATATGACAAATATTGGGACAAGTCCAACCTAGCTCTTGCTAAGATTTACCCTGACAAGTATGAAGAGGAATTTAAGCGTGTCTTGGCTACTATCGATAAACTTTTCCGGGCTTACAAGAGTTGTGTTGCAAGGTCTTCGAAACCTACCGCTGCAGGATCAAGTGAAAATTCTCAGCCACATGGTAATACTTCTTTGGGTCACAATGAAATCGAGAAATTCTTGTATGATGATGCAGCTGCAAATAAAGAAGACGATATAAATGAATTGGATGTCTACATGAAAGAGAAGCCAATTCGTTGGGTTGATCCAACAGGTGAAGGTGTAGAATTTGACATACTGGCATGGTGGAAGAGCAACCAAATGACCTTTCCTATCCTCTCAACACTCGCGCGTGATGTAATGGCTGTTCAAATCTCTACCGTTGCTTCAGAGTCAGCGTTTAGTGCTGGTGGTCGTGTTGTTGGTCCTTTTCGCAGTTCTCTAGATCCTGAGATGATTGAGGCTCTAGTTTGTACCAAGGATTGGATAAGAGCATCTAGAAAAGGACCATTTAAGGACAAGATATCAACAATTCTTGATGAGCTGGATGTACAGATAGAGGATAAAGATGGTGCTAAAACTGACAATGATGAGGAGTGTACAGCATTGAGTCTGAAGCTATCAAGCTATGAATGTCTACTTTTGCTACTACTTTGGTACAGTTTTGCTGATAGGCATTACGATGCCATAAGCCCCTAA
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| Protein seq | MRASRLQHRRRAFAVRRPPSGYAATPTDHRPLSHVAAWVCDKPTTVRLPPRRPPPQGPTWPLASFGSSTLRAEGRRATSSSSWVVKSTLSDSSSHPGASPAGTVAVGTGHSALAPNALVLNDATTATGGGGGSSEPVVIPDEEDGEFTGEVEPVAKRQKKCTSKVWDYFIKYTDKAKNKVTGVEEQQRKAKCKKCGRVFGAETVNGTKHLWNHLNRIHSLKQGQQELQVKGEVQTFRYDPEVSLEKWYIAVIMHEYPFSMVDHVYFNEFIHSLRPSFEFKCRITTSKAILEIFEVRKRILYDELKSVSTYMCITAHWIDENWLMQKRILKFIHIDGKHTGTRLANAFVKGVMSMNIEKKLFALTLDNASSNDKCAREVVIELNKLFNISKVPPLMCDGAFFHVRCLCHILNLVAQDGLKIIAHTIQNIRTTIGIVKNSTLQWEEFQKCAVECDLNNNSGLPLDVPTRWNSTYDMLKQAIYYRGAFERLLFLDEDRYQRCAPSAEEWGMAESLCNCLEKFNYATLLFSGCLYPTANLFWWKFCEIKLALREWCASADVSIASMAVAMQLKYDKYWDKSNLALAKIYPDKYEEEFKRVLATIDKLFRAYKSCVARSSKPTAAGSSENSQPHGNTSLGHNEIEKFLYDDAAANKEDDINELDVYMKEKPIRWVDPTGEGVEFDILAWWKSNQMTFPILSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLDPEMIEALVCTKDWIRASRKGPFKDKISTILDELDVQIEDKDGAKTDNDEECTALSLKLSSYECLLLLLLWYSFADRHYDAISP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0802400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g58830 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0802400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0285200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028951 | SBH | 0.108553 | 0.431461 | 0.467108 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0632000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029820 | SBH | 0.612182 | 0.622414 | 1.132290 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029500 | SBH | 0.728323 | 3.914738 | 2.768139 |
