Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0398300 | OGI:01013090 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:25609817-25611155 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGCAGGCTTTCCCTAGTCTCTATCGGTGACGAAGCTCACACTTCCTTTTGGTTTGACAACTGGCTCCCTGATGGACCACTATGTGACTCCTTTGCTGCCCTGCTCACGCACTCTCTCAACCTAGAAATAACAGTTCAGACCGTATTTCAAACAGGCCTGCAACACTGCTTCGTCCCCAGGTTATCCTCAACGGCTCTAGCGCAGCTAGACGCTCTTCAGGATAAATTGCTTTAGGTCCATCTTCATGAACGCCCAGACTTCAGAGCCGCGAAATGTTCTCCTCAATTGCCAATCTTGTCAGCTAAACACATATATGAAGCCACTCAGGTCTGGCTGGATGCTTGTCCAAACTGGAAGTTCGTGTGGCATAACAAGGCACTGCTCAAAGCTCAATTCTTCGCATGGCTCCTGGCTAAGGAAAGGCTACCGACAAAGCATAATCTGGTAAAGAAGACAATTGTAGCCTCAGATTTGTGCGATATTTGCAGAGCTGCATCTGAAACTGCAAGCCACATCTGCTTCCTTTGCCCCTTTGCCCGGCAATTCTGGATGACGATCGGCATTGACCCGCTTATTTATGATGTTCGTCAACTCGGACGTCTGCGCCCCAATGGAAACCTGCCCGAGCTGCACCACCAGGTCTTCTATCTTCTCTGCTTATGGGCACTATGGAACCACAGACACGACGTTGTTTTCTGCAACCTAGATGCTTCAGTTCCGGCAGCAATTAGTAAATGTGTGGACGAATGTTCTCTCTGGTCTGAACGTCTTAAGCCTCCTGATAGAGCTGTAGTTTCAATTTGGAAAGGGATCTTCTCCTCCCCCTTGCAACTCTTTATGTCATGTAATCTCAGTTGTAACCCTTACTCTATTTATTTAATGCAATTTAGGTGGGGAACCTCTCCCCTCCGATGACTTATCTAAAAAAAAAAACCTTCTAGTAGGAGAGCTTCCTCAGTGTAGGCTGGCAAGCTTGGGTATTAGTACTCTTCTTTTAGAAAACAATAGTCTTTCCAGTGAATTCCCTTCATTTATGAGAAGTTGCATGAAAATCACCTTCCTTGATCTGGCGAGGAATAATTTCCATGGAAGCTTACCAAAGTGGATAGGTGATTTGTCATCTTTGGTGATTTTTCGACTAAGGTCAAACATGTTCTCTGGTCAAATTCCAAGTGAAATCACAGAGCTTGAAGATCTACAATACCTGGATCTAGCAAAAAACAATATTTCAGGAATAATTCCACGATCTCTTGCAACCTTGAAAGGGATGTCTTCAGAGAATCAAGATCCTCGCCAAACAGGACTGAATGGCCCTTTTGTACAGACATCTAAATGA
More
|
||||||||||
| CDS seq | ATGCGCAGGCTTTCCCTAGTCTCTATCGGTGACGAAGCTCACACTTCCTTTTGGTTTGACAACTGGCTCCCTGATGGACCACTATGTGACTCCTTTGCTGCCCTGCTCACGCACTCTCTCAACCTAGAAATAACAGTTCAGACCGTCCATCTTCATGAACGCCCAGACTTCAGAGCCGCGAAATGTTCTCCTCAATTGCCAATCTTGTCAGCTAAACACATATATGAAGCCACTCAGGTCTGGCTGGATGCTTGTCCAAACTGGAAGTTCGTGTGGCATAACAAGGCACTGCTCAAAGCTCAATTCTTCGCATGGCTCCTGGCTAAGGAAAGGCTACCGACAAAGCATAATCTGGTAAAGAAGACAATTGTAGCCTCAGATTTGTGCGATATTTGCAGAGCTGCATCTGAAACTGCAAGCCACATCTGCTTCCTTTGCCCCTTTGCCCGGCAATTCTGGATGACGATCGGCATTGACCCGCTTATTTATGATGTTCGTCAACTCGGACGTCTGCGCCCCAATGGAAACCTGCCCGAGCTGCACCACCAGGTCTTCTATCTTCTCTGCTTATGGGCACTATGGAACCACAGACACGACGTTGTTTTCTGCAACCTAGATGCTTCAGTTCCGGCAGCAATTAAAAACAATAGTCTTTCCAGTGAATTCCCTTCATTTATGAGAAGTTGCATGAAAATCACCTTCCTTGATCTGGCGAGGAATAATTTCCATGGAAGCTTACCAAAGTGGATAGGTGATTTGTCATCTTTGGTGATTTTTCGACTAAGGTCAAACATGTTCTCTGGTCAAATTCCAAGTGAAATCACAGAGCTTGAAGATCTACAATACCTGGATCTAGCAAAAAACAATATTTCAGGAATAATTCCACGATCTCTTGCAACCTTGAAAGGGATGTCTTCAGAGAATCAAGATCCTCGCCAAACAGGACTGAATGGCCCTTTTGTACAGACATCTAAATGA
More
|
||||||||||
| Protein seq | MRRLSLVSIGDEAHTSFWFDNWLPDGPLCDSFAALLTHSLNLEITVQTVHLHERPDFRAAKCSPQLPILSAKHIYEATQVWLDACPNWKFVWHNKALLKAQFFAWLLAKERLPTKHNLVKKTIVASDLCDICRAASETASHICFLCPFARQFWMTIGIDPLIYDVRQLGRLRPNGNLPELHHQVFYLLCLWALWNHRHDVVFCNLDASVPAAIKNNSLSSEFPSFMRSCMKITFLDLARNNFHGSLPKWIGDLSSLVIFRLRSNMFSGQIPSEITELEDLQYLDLAKNNISGIIPRSLATLKGMSSENQDPRQTGLNGPFVQTSK |
||||||||||
| Function | Leucine-rich repeat receptor-like protein kinase PXL1 [UniProtKB/Swiss-Prot:Q9FRS6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0398300 | OsMH63_01T0398300.1 | Chr01 | 25609817 | 25611155 | + | maker | ||
| CDS seq | ATGCGCAGGCTTTCCCTAGTCTCTATCGGTGACGAAGCTCACACTTCCTTTTGGTTTGACAACTGGCTCCCTGATGGACCACTATGTGACTCCTTTGCTGCCCTGCTCACGCACTCTCTCAACCTAGAAATAACAGTTCAGACCGTCCATCTTCATGAACGCCCAGACTTCAGAGCCGCGAAATGTTCTCCTCAATTGCCAATCTTGTCAGCTAAACACATATATGAAGCCACTCAGGTCTGGCTGGATGCTTGTCCAAACTGGAAGTTCGTGTGGCATAACAAGGCACTGCTCAAAGCTCAATTCTTCGCATGGCTCCTGGCTAAGGAAAGGCTACCGACAAAGCATAATCTGGTAAAGAAGACAATTGTAGCCTCAGATTTGTGCGATATTTGCAGAGCTGCATCTGAAACTGCAAGCCACATCTGCTTCCTTTGCCCCTTTGCCCGGCAATTCTGGATGACGATCGGCATTGACCCGCTTATTTATGATGTTCGTCAACTCGGACGTCTGCGCCCCAATGGAAACCTGCCCGAGCTGCACCACCAGGTCTTCTATCTTCTCTGCTTATGGGCACTATGGAACCACAGACACGACGTTGTTTTCTGCAACCTAGATGCTTCAGTTCCGGCAGCAATTAAAAACAATAGTCTTTCCAGTGAATTCCCTTCATTTATGAGAAGTTGCATGAAAATCACCTTCCTTGATCTGGCGAGGAATAATTTCCATGGAAGCTTACCAAAGTGGATAGGTGATTTGTCATCTTTGGTGATTTTTCGACTAAGGTCAAACATGTTCTCTGGTCAAATTCCAAGTGAAATCACAGAGCTTGAAGATCTACAATACCTGGATCTAGCAAAAAACAATATTTCAGGAATAATTCCACGATCTCTTGCAACCTTGAAAGGGATGTCTTCAGAGAATCAAGATCCTCGCCAAACAGGACTGAATGGCCCTTTTGTACAGACATCTAAATGA
More
|
|||||||
| Protein seq | MRRLSLVSIGDEAHTSFWFDNWLPDGPLCDSFAALLTHSLNLEITVQTVHLHERPDFRAAKCSPQLPILSAKHIYEATQVWLDACPNWKFVWHNKALLKAQFFAWLLAKERLPTKHNLVKKTIVASDLCDICRAASETASHICFLCPFARQFWMTIGIDPLIYDVRQLGRLRPNGNLPELHHQVFYLLCLWALWNHRHDVVFCNLDASVPAAIKNNSLSSEFPSFMRSCMKITFLDLARNNFHGSLPKWIGDLSSLVIFRLRSNMFSGQIPSEITELEDLQYLDLAKNNISGIIPRSLATLKGMSSENQDPRQTGLNGPFVQTSK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0073905 | 0.0025885 | 0.014892 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0601675 | SBH | 0.227110 | 0.0 | 0.185028 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41960 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0601675 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024280 | SBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023880 | SBH | 0.013616 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024190 | SBH | 0.0 | 0.885465 | 0.211562 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023540 | SBH | 0.025093 | 0.039633 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023300 | SBH | 0.352614 | 0.000000 | 0.306255 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0397500 | SBH | 0.3554735 | 2.771577 | 2.6430535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023220 | SBH | 0.079721 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0387100 | RBH | 0.011367 | 0.0056345 | 0.0633975 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023260 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023200 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023460 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0044090 | SBH | 0.326436 | 0.0 | 0.583814 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023370 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023570 | SBH | 0.038315 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023280 | SBH | 0.000000 | 0.449103 | 0.089174 |
