Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_01G0385600		OGI:01071670 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr01:24826558-24831188		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTCCAATCGAATCGGAATCCATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTACGTCCGTCCGTTCATCCCTCTGTCTGCTTTGCTCGATGGGGGTGGTCGGGTTCCTAGGGTTCATGGGGGCTCCTGTGCTGACGTTGTGGTGCTTGCAGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATGTGAGCGCCACCCCGTTCCTGTCTCTTGGTTGGCTGAAAGGAGATTTGTGTGTTCTTAGATCCTGCCTGCTTGGAAACTGCAGTAGTTTTGTTCAGTTTTATGTGGTGCTGTAGAATTCTACTGCGAAAGTTCATTGCAATAATCGCATGAGTGATTTGGACATTGATTACCTAGTGTAATACAGTATAATATTGTATCTGTGTTCTAAAACCAAGGGAGGTGAATGAAACAAGGTTCCCGTTTGGATTAGCAACTTTCTGTTATGTTAATAAACTATATATGCCCTTGTTCCTTGCTTTTGTTCCCAGCATTTATTGATGCTAATTTTAGTTGAAATTGCAATAACCGTAGGGCTTTATAGCTATTTAGGTTCTGTGAGATTGTTCGTTGATATTCTTCTCTTCTTGGCTATGCAGACAAAATCTTGAGCAAAATGGGAGAAGGTTGGATTTTCTGCAATCTGTTCCCTAGTACCTGGTGTCTTTGCTATTATTGTAATGTAAAGCAACAGGAATCATTTTTAATTTTTAATAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTGTGAGTACCTCAAAATATTTGATCCCAAAAATCTTAGTCTTTTCTGTTTCTCTCCTGATCAGTCTTCCTTACTGGCCAGCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAGTTCTAAAAATCTATACCAAATGTCAGTTGTTGATATGCGCATTTACAGTTCCAATATTCCATATTCCACTTTTCCCTGTTAGTTCAAAGTTTTGTTTGTTGGCAATTTACTTTGCTGGCCCTCCGAATATTCACCTTTTTGCTCGTAGGCAGTGAAACATGCTGCTATGTACGATATGGTAATGTGCTTGAATAGGATTTCCATGCTTATAAAACAGTTGTCGTTCTTTGCTCATAAAGGTTTGCCGATATGAAAACAAATCAAAGATAATTTTTCTTCAATGGATATCGATGGTTTTGTCAGGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATGTGTGTGATTGTTTGATTCTGCATATCAATTCTTAACAAATTCGGTAGCTGCTGATTCATTCTTCTGTTGCTGAAAAGGAGCATGCTTGACCATCTTTTCCTTTCTTTCTTCTAAAATAGATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGGTAATGTCAATCAGTTTTGTAGTGATCATCTGCTATTCTGAAACTAGGCATGCGGTATTAGCAGTTATGTTGAATGATCCCTTGGGGTTGTACAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGTAAATTGGTTATCTTTTAAGGTTTGCTTTTATTTTATCTTGCTTGAGTTTGGAATATCCTTGCGATGAAGGTTAATGTGGCCTCGAGTATGCTCCAATGGAGCACAACAAAGGTGCAATTCAAAATCCTTGGATGCAATAATTGATAATGCTGTTAGAACTCTTATTTTTAGTGATTCGAAATGACAGAACTCATTAAAACAATGAAAACTTCTTGCCATCACTATAATCATGTTAGTATTGGCAGAAGAAATAGCACTTGGTCTACTTATTCGTCATTTTTTTCAGTGTACTATCTGATTATGCTTTATAGTAAAGTGGTAGGCATTTGACTGAGAAGAATGTTTTTATTAACTTGGTATTTTTAGAGATGGAGCATATATTCCTCCCTAGATAATTCTGATATTCTTGAATATGTTCCTATGACAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGTTTGATATCTTGTCATGCATATTTTTCCTTTCTTTTACCTTAGCCTATGTTCCTAACCATAAAAAACCTTTAGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGGTACATTGTGGCAGTGTGCACACTACTTTGATGATCGTTTTCTTTTACCTTTTTCTGTGTTGTCCTCAATATAGCAAGTAGTAAACGAATCTATGTTTTACTGTTTAATTTGGCATTTGACAAGGAAAATTTTAATTGTATCACTTTTTAAAAATATTTTTTGGGTTTTCCTTTCTATAGAACTTGACTTGTTAGTGGTATGCTATTCTGCCAAGTTGAACCCCTCAATATGTCCGTTTTCTTATACTAGCTTGTAATTTAACAACAGTTTGTTCATGTGTAGACCCAACCTTAAATCCAGGGTTTTTTTTAACAGTTTATAGTTACTCCAACTCACTAATACTCGAGTCTTATATTTCTTTTGATTGATTTATCCATAGTTCTCATATAAAGTAATAATAATAGATGCAACTCATGCGAATGCTGTTTCTGAGTACGTCATGTGGCTGTCATGTTAACTTTGGCTATGGTATGCTACCATTTACTGTCTTGCAATGATCAATCTTCTTCATTTTATACTGATTTTCCATATTTGCATCGTGTATGTCAACTGGAATATGCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGTTTTGGTTCCCTCAATTATATCTCTTTTTTTTTGCTACGTTTATCCCCAATCTAAATTATATCTCTAAAATTCAAAACAATATTATGCATATTCCTGTTCTTCAGTCTATCTCCTGTCTGCTACAAGTAAAAGAAATACCATGCATAGAAACATACAAATCAAGAGTAGAAGCAGAAGCTGTTTTTTTTTAATGTAACTATGCATCTATAGTTAATGATTTGTCTGAATGAAGGCATATTATGTTTGTAAATGTTTGATATAAAGCTTATTTCAGTTTTGTCAGGGTGCAGATAGAAAAAATAAAGTTCCATTTTCTTTGGTGAACTGGTCCTCTTGTAGTGTAGTATCTGTTTCATTTAGTGATTTACTATGCTGTTTGTGTGGTAAATTCAGAGTATTATTCTGCTGGTTAGTAAAATTATTCCTTCAAATTTCCACTAAGAGGAAATGAGAAAGTATTAGAAACATATTCTGAAATATCTGTTCTGAAGAAGATTCAACTTACACACCTCAAACATTATGGACTGAAACTTCAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGAGTACATGATCATGCTGACTCTACCCCTCCCAATATGTACGTGAAGAACCCAAGCCTGGAGAAAGCAGGCGCAAGGCCATTCCCATATAAAGCAGAATGCCTTCAGCTCATCTGTACCATAAATCTTCTGTAAGCTGAGCTATAATGCTTGTGGTGGTGACACGGCATAACTGTTACGTTCACCCGATGTAATGTACAATAGCATTGAATCTAGGGAAGGTTGATGTAGCAGATGGAACTTGTGCATTGTGAGTTGTGTGATACATGAGGAATTGCATTGCGACTCGTGTCGCAGTGACACAACAATGACCAAAGCAGGCCATATATGCCCCTTCCAAATGCTTGTATGATGTATCCTTGCTGGGGTGTTCATGTTACTTAAACATCTCTGTATCCTGAAGTTCCGTTGAAAGCCTGACAAAGTACATAGTAGGGTTGGCACTTGGCGCCTGTTTGTCCTGTTTGCAACTTGCCATGACTTCCTGAAAAATGTTGTGCATACACTGTTACAGATTTGAATCTTCAAAATGCAGAGAGCGAGAGGAATTTTGATTCGAC More
CDS seq		ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGA More
Protein seq		MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKASSSAQKYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADLLYGLLKFEPSERLTAQEALDHPFFRNTT
Function		Serine/threonine-protein kinase AFC3 [UniProtKB/Swiss-Prot:P51568]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.1	Chr01	24826558	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKASSSAQKYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADLLYGLLKFEPSERLTAQEALDHPFFRNTT More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.2	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGATGCAACTCATGCGAATGCTGTTTCTGA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKARCNSCECCF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.3	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGGTACATTGTGGCAGTGTGCACACTACTTTGA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKARYIVAVCTLL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.4	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGATGCAACTCATGCGAATGCTGTTTCTGA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKARCNSCECCF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.5	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGTTTGA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGLGWSFPCDLWSVGCILVELCSV More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.6	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGTAAATTGGTTATCTTTTAA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILGKLVIF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0385600	OsMH63_01T0385600.7	Chr01	24826598	24831188	+	maker
CDS seq	ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGGTAATGTCAATCAGTTTTGTAGTGATCATCTGCTATTCTGAAACTAGGCATGCGGTATTAGCAGTTATGTTGAATGATCCCTTGGGGTTGTACAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAA More
Protein seq	MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFEKLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYIRVPGSKVMSISFVVIICYSETRHAVLAVMLNDPLGLYRRIHKMRCISSAYQSPVP More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	6.519944	13.8544245	32.210149

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0590900	RBH	0.550505	1.058117	5.206822
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g40840	RBH	0.347069	0.623409	1.223477
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0590900	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0023620	RBH	0.357651	2.562901	4.214345
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0023190	RBH	0.169221	0.991578	2.400526
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0023510	RBH	1.465007	0.000000	6.519214
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0022920	RBH	0.037961	0.153869	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0022610	RBH	0.000000	0.000000	11.327125
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0022550	RBH	0.387896	0.318597	0.573793
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0374300	RBH	4.3698785	9.645088	19.802124
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0022540	RBH	0.151398	0.346642	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0022490	RBH	0.171752	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0022770	RBH	2.147319	16.463795	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0022780	RBH	0.477039	0.353600	0.524439
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0022590	RBH	0.465000	3.444213	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G022920	RBH	0.256125	1.976373	1.665457
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0022590	RBH	2.647270	9.971820	3.703799

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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