Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_01G0374300 OGI:01071670 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr01:24473723-24478321
Gene Symbol -
DNA seq

TCTCTCTCTCCCCTCTCTCTCCAATCGAATCGGAATCCATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTACGTCCGTCCGTTCATCCCTCTGTCTGCTTTGCTCGATGGGGGTGGTCGGGTTCCTAGGGTTCATGGGGGCTCCTGTGCTGACGTTGTGGTGCTTGCAGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATGTGAGCGACACCCCGTTCCTGTCTCTTGGTTGGCTGAAAGGAGATTTGTGTGTTCTTAGATCCTGCCTGCTTGGAAACTGCAGTAGTTTTGTTCAGTTTTATGTGGTGCTGTAGAATTCTACTGCGAAAGTTCATTGCAATAATCGCATGAGTGATTTGGACATTGATTACCTAGTGTAATACAGTATAATATTGTATCTGTGTTCTAAAACCAAGGGAGGTGAATGAAACAAGGTTCCCGTTTGGATTAGCAACTTTCTGTTATGTTAATAAACTATATATGCCCTTGTTCCTTGCTTTTGTTCCCAGCATTTATTGATGCTAATTTTAGTTGAAATTGCAATAACCGTAGGGCTTTATAGCTATTTAGGTTCTGTGAGATTGTTCGTTGATATTCTTCTCTTCTTGGCTATGCAGACAAAATCTTGAGCAAAATGGGAGAAGGTTGGATTTTCTGCAATCTGTTCCCTAGTACCTGGTGTCTTTGCTATTATTGTAATGTAAAGCAACAGGAATCATTTTAAATTTTTAATAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTGTGAGTACCTCAAAATATTTGATCCCAAAAATCTTAGTCTTTTCTGTTTCTCTCCTGATCAGTCTTCCTTACTGGCCAGCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAGTTCTAAAAATCTATACCAAATGTCAGTTGTTGATATGCGCATTTACAGTTCCAATATTCCATATTCCACTTTTCCCTGTTAGTTCAAAGTTTTGTTTGTTGGCAATTTACTTGCTGGCCCTCCGAATATTCACCTTTTTGCTCGTAGGCAGTGAAACATGCTGCTATGTACGATATGGTAATGTGCTTGAATAGGATTTCCATGCTTATAAAACAGTTGTCGTTCTTTGCTCATAAAGGTTTGCCGATATGAAAACAAATCAAAGATAATTTTTCTTCAATGGATATCGATGGTTTTGTCAGGTTTTTGAGAAGCTTGGGCCAAGCTTGTATGATTTTCTAAAGAGAAATAGATACCAACCTTTCCCTGTGGAACTTGTGCGGGAGTTTGGACGGCAACTGTTGGAATCTGTAGCATGTGTGTGATTGTTTGATTCTGCATATCAATTCTTAACAAATTCGGTAGCTGCTGATTCATTCTTCTGTTGCTGAAAAGGAGCATGCTTGACCATCTTTTCCTTTCTTTCTTCTAAAATAGATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGGTAATGTCAATCAGTTTTGTAGTGATCATCTGCTATTCTGAAACTAGGCATGCGGTATTAGCAGTTATGTTGAATGATCCCTTGGGGTTGTACAGAAGAATTCACAAGATGAGATGCATTTCAAGTGCTTACCAAAGTCCAGTGCCATAAAGCTGATAGATTTTGGTAGTACCGCCTTTGATAATCAGGAACATAGCTCGATTGTTTCTACAAGGCATTACAGAGCACCTGAAATAATCTTAGGTAAATTGGTTATCTTTTAAGGTTTGCTTTTATTTTATCTTGCTTGAGTTTGGAATATCCTTGCGATGAAGGTTAATGTGGCCTCGAGTATGCTCCAATGGAGCACAACAAAGGTGCAATTCAAAATCCTTGGATGCAATAATTGATAATGCTGTTAGAACTCTTATTTTTAGTGATTCGAAATGACAGAACTCATTAAAACAATGAAAACTTCTTGCCATCACTATAATCATGTTAGTATTGGCAGAAGAAATAGCACTTGGTCTACTTATTCGTCATTTTTTTCAGTGTACTATCTGATTATGCTTTATAGTAAAGTGGTAGGCATTTGACTGAGAAGAATGTTTTTATTAACTTGGTATTTTTAGAGATGGAGCATATATTCCTCCCTAGATAATTCTGATATTCTTGAATATGTTCCTATGACAGGCTTAGGGTGGAGTTTCCCTTGTGACCTTTGGAGTGTCGGATGCATCCTTGTTGAGCTATGCTCGGTTTGATATCTTGTCATGCATATTTTTCCTTTCTTTTACCTTAGCCTATGTTCCTAACCATAAAAAACCTTTAGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGGTACATTGTGGCAGTGTGCACACTACTTTGATGATCGTTTTCTTTTACCTTTTTCTGTGTTGTCCTCAATATAGCAAGTAGTAAACGAATCTATGTTTTACTGTTTAATTTGGCATTTGACAAGGAAAATTTTAATTGTATCACTTTTTAAAAATATTTTTTGGGTTTTCCTTTCTATAGAACTTGACTTGTTAGTGGTATGCTATTCTGCCAAGTTGAACCCCTCAATATGTCCGTTTTCTTATACTAGCTTGTAATTTAACAACAGTTTGTTCATGTGTAGACCCAACCTTAAATCCAGGGTTTTTTTTAACAGTTTATAGTTACTCCAACTCACTAATACTCGAGTCTTATATTTCTTTTGATTGATTTATCCATAGTTCTCATATAAAGTAATAATAATAGATGCAACTCATGCGAATGCTGTTTCTGAGTACGTCATGTGGCTGTCATGTTAACTTTGGCTATGGTATGCTACCATTTACTGTCTTGCAATGATCAATCTTCTTCATTTTATACTGATTTTCCATATTTGCATCGTGTATGTCAACTGGAATATGCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGTTTTGGTTCCCTCAATTATATCTCTTTTTTTTTGCTACGTTTATCCCCAATCTAAATTATATCTCTAAAATTCAAAACAATATTATGCATATTCCTGTTCTTCAGTCTATCTCCTGTCTGCTACAAGTAAAAGAAATACCATGCATAGAAACATACAAATCAAGAGTAGAAGCAGAAGCTGTTTTTTTTTAATGTAACTATGCATCTATAGTTAATGATTTGTCTGAATGAAGGCATATTATGTTTGTAAATGTTTGATATAAAGCTTATTTCAGTTTTGTCAGGGTGCAGATAGAAAAAATAAAGTTCCATTTTCTTTGGTGAACTGGTCCTCTTGTAGTGTAGTATCTGTTTCATTTAGTGATTTACTATGCTGTTTGTGTGGTAAATTCAGAGTATTATTCTGCTGGTTAGTAAAATTATTCCTTCAAATTTCCACTAAGAGGAAATGAGAAAGTATTAGAAACATATTCTGAAATATCTGTTCTGAAGAAGATTCAACTTACACACCTCAAACATTATGGACTGAAACTTCAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGAGTACATGATCATGCTGACTCTACCCCTCCCAATATCTACGTGAAGAACCCAAGCCTGGAGAAAGCAGGCGCAAGGCCATTCCCATATAAAGCAGAATGCCTTCAGCTCATCTGTACCATAAATCTTCTGTAAGCTGAGCTATAATGCTTGTGGTGGTGACACGGCATAACTGTTACGTTCACCCGATGTAATGTACAATAGCATTGAATCTAGGGAAGGTTGATGTAGCAGATGGAACTTGTGCATTGTGAGTTGTGTGATACATGAGGAATTGCATTGCGACTCGTGTCGCAGTGACACAACAATGACCAAAGCAGGCCATATATGCCCCTTCCAAATGCTTGTATGATGTATCCTTGCTGGGGTGTTAATGTTACTTAAACATCTCTGTATCCTGAAGTTCCGTTGAAAGCCTGACAAAGTACATAGTAGGGTTGGCACTTGGCGCCTGTTTGTCGTTTGCAACTTGCCATGACTTCCTGAAAAATGTTGTGCATACACTGTTACAGATTTGAATCTTCAAAATGCAGAGAGCGAGAGGAATTTTGATTCGAC

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CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGA

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVNMHELRLIHTDLKPENILLVSSEYIRVPGSKGEALFQTHENLEHLAMMERVLGPLPEHMIRKASSSAQKYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADLLYGLLKFEPSERLTAQEALDHPFFRNTT

Function Serine/threonine-protein kinase AFC3 [UniProtKB/Swiss-Prot:P51568]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0374300 OsZS97_01T0374300-mRNA-1 Chr01 24473723 24478321 + makerRMon
CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAATATGCATGAATTACGCCTTATTCACACTGATCTGAAGCCAGAAAACATACTCCTTGTGTCTTCGGAGTATATAAGGGTTCCAGGTTCCAAGGGGGAAGCATTGTTTCAAACACATGAGAACCTTGAGCACTTAGCAATGATGGAGAGGGTTTTGGGTCCACTCCCAGAACACATGATAAGGAAAGCCAGTTCATCAGCTCAGAAATATTTTAGACGAGGAGCGCGTCTAAATTGGCCTGAAGGTGCTGTTTCAAGAGAGAGTATCAGAGCAGTCAAAAAACTAGATCGGCTAAAGGACTTAGTGGCGAGGAAGGCTGATCATTCAAGGGCGGTGCTGGCAGACTTGTTATATGGGCTTTTAAAATTTGAGCCATCAGAGCGTCTTACTGCCCAAGAAGCTCTAGACCATCCATTTTTCAGAAATACAACATGA

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVNMHELRLIHTDLKPENILLVSSEYIRVPGSKGEALFQTHENLEHLAMMERVLGPLPEHMIRKASSSAQKYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADLLYGLLKFEPSERLTAQEALDHPFFRNTT

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Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0374300 OsZS97_01T0374300-mRNA-2 Chr01 24473723 24478321 + makerRMon
CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAG

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVSLNFIHLC

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0374300 OsZS97_01T0374300-mRNA-3 Chr01 24473723 24478321 + makerRMon
CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAG

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVSLNFIHLC

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0374300 OsZS97_01T0374300-mRNA-4 Chr01 24473723 24478321 + makerRMon
CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAG

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVSLNFIHLC

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0374300 OsZS97_01T0374300-mRNA-5 Chr01 24473723 24478321 + makerRMon
CDS seq

ATGGAGTCGTCGCGGTCGCGGAAGCGGGCCCGCCAGGACTGGGACGGCGCCGGCGCGCCGCCGCCGCCGGCGGAGCGGGCGGTGGTGGCGAGGGGCGGCGCGTCGCCGCCGTGGAGGGACGACGACCGCGACGGGCACTACGTGTTCGACCTCGGCGAGAACTTGAACCGACGATACAAAATCTTGAGCAAAATGGGAGAAGGTACTTTTGGGCGTGTTTTGGAATGCTGGGACCGTGAAACACATGAATATGTCGCAATAAAAGTTGTTCGTAGCATCCGCAAGTACAGGGATGCTGCAATGATTGAGATCGATGTGCTCAACCGCCTTGCAGAAAATGAGAGATACAGATCACTCTGTGTCCAGATTCAAGGATGGTTTGACTATCGCAATCATATATGCATTGTAAGTCTCAATTTCATTCATTTATGCTAG

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Protein seq

MESSRSRKRARQDWDGAGAPPPPAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRETHEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVSLNFIHLC

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 4.3698785 9.645088 19.802124

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0590900 RBH 0.550505 1.058117 5.206822
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g40840 RBH 0.347069 0.623409 1.223477
Nipponbare | IRGSP 1.0 | RAP-db Os01g0590900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0023620 RBH 0.357651 2.562901 4.214345
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0023190 RBH 0.169221 0.991578 2.400526
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0023510 RBH 1.465007 0.000000 6.519214
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0022920 RBH 0.037961 0.153869 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0022610 RBH 0.000000 0.000000 11.327125
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0385600 RBH 6.519944 13.8544245 32.210149
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0022550 RBH 0.387896 0.318597 0.573793
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0022540 RBH 0.151398 0.346642 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0022490 RBH 0.171752 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0022770 RBH 2.147319 16.463795 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0022780 RBH 0.477039 0.353600 0.524439
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0022590 RBH 0.465000 3.444213 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G022920 RBH 0.256125 1.976373 1.665457
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0022590 RBH 2.647270 9.971820 3.703799
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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