Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_01G0185100		OGI:01033650 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr01:11369433-11374502		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GGATGAGTGCGGGAGGGAGGAAGGGACGAACGAAGCGTTATATATTTTTTTAATTATGTATAGATACACAAACCAATAAATTTATGGAGCTAGATATATCCAACTTTTAAAAAAATGGATCTTAAGCTGTGCCAAATAGAACTAAACGTGTGCATGTACAAAACACGTTGATATATATTGCACGGAGAAAATCGAAGAAACTTCAATCTGGCAAGGGAAACATTTTGAAGCTAATTCGAGAGTAAGGTAGGAGCTACCAGTTAATCTAAACATGACTAATCGTCCACCTCAACTGTCAGGCCCTGCATGCAACTGAATCCATCACATCCACCAAGTTCTGAATGGATGTAATTCCACCTGGCTTGTTAGTGATTGCGTGGGTAAGCACCGAGCTCCCACCCTTTGCAGCATATTCATGCTAGCATCAAGCTCCTTCATATCCCAGTGTCCCGTCTTCCAACGATTTTGCAACCTAACACCATCATCCTTCAGTTCATTTTCAGCCATGATTATAACTTGTTAGTGCTTAAAGTGCTGCTGGGTGGGCTGCTTGACATCAATTTCATCTCCAGCCATTTCAAGGACCTCCAACTGAAAGGGTTTTCCTGAGAACCACCCTGCGTCAACACCAAACAAATTGTCCGTGACACTCGCTATGACTTATGAGATGATACCATAGCGAAGGATCTTAAAAAAATAATAAAATCAAGGGTATGACTGCTCCCCGAATTACGAAATGTGACCATATAATTGTAATGGTTAGAGTAGGTTTGGTATTTGCCTATTTTGTTGCCTTACCAAAATGTAGTAGATGGCAAAAATCCAGACATGCCCCTAGTCTCAACTCTCAACTCCTTCAGTGGAGATAGCTTTGAGCGATTCAAACATTTCAGGCCGAATATCAACCCTGTCAACTTCCATGCGCTGAGGGATGGATGGATTTGTTCTACCTACAGATATATAGGTCCGGATCAAGGCTTCATAGGCTTCAGCATCAAGGCGACCGAGATTCTTCAGGCATTCACAGAACGTCTCCATCCCATCCACATCCTTTGAATCCTCAAAGTGCTTCAGATATCTGTTCACAAGCTTTTCTGGCACCCAATCCTGCCCCTTCACCATTTTCTTTGCATCTTTCCAGACCTGCAGTGCCTCATTCATTTTAGATTTCTCCAAATAGAATTTTGCGAATATGCAAAATGTTCTGTAGTTGGAATGATCCTGAGCCATGGTTGTCTGACGCATAGCCTCAGCTTTGTCTACCATGCCCTTATCAAGGTAAGCTTGGATGATAATATTTGGTATTTTCATGTCATAGTGCTCATGGCTTGATTCCCATTCCTGAAAGATTTGCTGCAGGGTGTCAAAATCATCCAACTTTTTCAGAGCTTTAAGCATCACTAGATAGCTTCTATTTGTGCATTTCTTGAATGCAGACTTTAAAGACTCCCAGATTCTCTTGACCTCGGACAAGTTGCCGGAATTGGCATAGTGGGAGAGAAGACAATGCCAAGAGAAAACGTCATGCTTGTCCAGAACTTCCTCAGCTTTCTTAAGGGTGAATTCTGCCTTGTCAAACTGCTGCAGCTTATTATAACCGTTAGCAAGTGTAGCATACAAGGACCAAGGAACTGAATTTACCTCCTGCAATTCTTTCAGGACCTTCTCAGCGGACTCTATGTCATTCATCATAATGTAGCTTTCTGTTAGCACAAAGTATGAAAACTTGTTTGGTTGTATACCACTTTCTTGCATTTTTACAACTGTAGTGGGGATTTTCTCTGGTTGATCTGTCTTCAGGTATAAGCACATCAAATTGTTGTACACCAATATATCTGAAACAATGTTCATCGCTTTCATATTTTCATAGAGTTCTAGGCCTTTCTCTGCCATCCGGTGCTCAGCATAGCAGTTAAGCAGAGTGGAATAAGTTTGCTTTGACCTGAAAATATCTGGAAGGCTCCCGAAGTACTCTTCTGCAGCATGTATACCATTCAGTTTGCTAACAAGGTCAAGCCGCAAAGCATGATGCTTGAGCTCCAAGTTCACTCCACGAGCTTCCATCCAGTCCATCAACTGTAAACATGAAAACATGGTCAGTCATCACATGGCCAACGAAAAATACCTTGCCCAGCTGCCCCCAAAAGGGAGAAAACCCAACTCGAATGTTCAATGTTTCTTATGATACAGAACCCTGAAGGAAAGAGAACAGTTCTGTAAAACAGAGTATTTATCTTTTCTGATGATTGCAATGGTGCAAAAGACTCGAAATTACAAAAAGTAAATCACACAAATTGACATCAGTTTATATCGGACATACAATTACAAATATATAACCAAAGTGACAGGAACATCTTTATGTGGTTACCACACAAAGTTGAAATGTAATAAGCACAAAGGAGCCCACAAAGCTTTTGATAGAAAAGAACTGAGACCAAATACAGCATGCCATTCCAATTTAGGTCAACCGCTCAGTGTAGCGAATAGATATTGCCACCCACCCAACATTGCTTCACCAGTGGCAGTGTAAGCAATACCATTACTATTTGTTTGACAGTGTTACTGTACCAAATTTCTGTGATGAAAAACAATCAGTTGATTGCAGGCTCTGTTTTATGGAAGACGATTATTGCTAAACTATGTAAAAGCTACTCCCTCCCTCCCAAAAATATAGCTACCTTTAGGACTTCTCAAGGAGATTATGAAAGTATATAGAATTAAATGGATGAAGGTTGTGATTGGTTGAGATAGGTGGTAGATAGAGAAATTAAATGAAATATGGTTGAGACGAAGAAGTATGTAGAGAAATTAAATGAGAGATGATTGTGATTGGTTGAAAGAAGAAAGTAGATGAAGAAATTAAATGAGAGATGGTTGTGATTGGTTGAGATGAGAAAGTGATGAAGTAGCAGCTATATTTTGGAATAAAATTTTAATGCTAAAGGTAGCTATACATTGTGACGAACAGAGCAAAATATAACAGCTTGTTATGACAGTTGTGTGCATTAAACAAGATGCGAGAGACTGCATATATTCATTAGTACAAAAGCTAGTAGAGATAAGGATGATAATGGCAAGTTTTCTTCTATTTGTAAGGAAGGTCTTATTAAAGAGCAAGAGTGATGACATGTCATATGATAAATTGAAATAGGAATCAAACATATCATTGAATTTAGTAAAATGAAGGATAATGGTAGCAACCTAAAACTAATTCAGTAACTCAAGTTAAGACTACTTTAAACTTAAGGAATGCAATGTTGCTTCAGAATTCTGAATCACATAAATGCATCCAAGGAAAGATTAAAGGGCAAAGCAAATATTATTCACATGAACTATGAGGACAGAGGATTAAGAAAATAAGCATTTAAAGCCGGATCCATTTCTACCATGGATGTAGTATGTTTTTGCTAATATGGCATATAATCCCCAGCACATACACTGAATCAGTAAACGGAAAAGGTATTATGCCCCTTCCTTGTCACATAGCTCCAATGTGGAAAAATGACCTACTAAACAATGGTGGTATCAGTCAAGGAGGGTTACGTGTGCTAGGTTTAGAAGGAAACTGCTGCATTGCTAATGTAGTCCATTTCAGGATATAGGCATGATAACATGTCAGATTTATGAGGAAAACAACTAGTAGTACAGAGCTAATGTAACCTGATGGGGTGATACATAGAGATCAAGGACACACAGCTCCTAGGAAAACACAGGTACATGACTAACACGACTACCCCTGGTTTATCTTGCATCGTTAAACTGGATCGAACTAGCTCATTTGGGCTTAGCCAAGAGAAGCAGGGCTCCCCATTTGGTTGCACTACAGAAACAAAGGAAGCAGGCATGTGCGAGTTGGACATTCTTCATCTGCTTGCCCACTTGGGAGAGCCAGTTCAGCTCTTCTCCATCGGCAATATTTCCTCTGCCGTTAGCCCATTACTGGGTGTATTGCTGAGTAAAGGTAGTTTCTTTCCTGTACTGTCCTCACTGCACATCAAAACACACTTGAACTGCTTCAATATGGATATGGATATGGATTTTTTTTTTTGAAAAAAGGAATTATACAAGCAAGCAAAGTTCCACATAAAAATGGAAACCTGATGGTTAACATCTTGGTCTTGGTATACATCAACCATTCCGTATTATCCATCAAATTATACAGAGGCAGTTTAGGTAGTCTGAAGATCATGAAGAAAAATCCACAGTAAAATATATTTTGATCCATATGACCAACAAAAAACAGACTAACTTTAAACAAGACAAGGACCTTCTGAGTTCTCCCCTCTTCTACAATACATTAATCAAGCGTAGGATTAAGCTTAATCCAGTATGACAGTTCTTGGAATACCAGAAGCAAATATTCAGTTCAGTCACAATCGTTAAAGAATCAACAAATATAGGTTCTCAGTTCTGGCCTGCGTTTCCCTTAACAAATTCTCGAAATAACGGGGAAAACACATTATGCTGCTAGATTACTACTAGTACATTATAGTTCCCTAAGATATTGGCAAATGCTATAATATTACAAACGGAGTTGTTAACACAAAATTACCCTAAAATACAGTGTAGATAGGACGAAACAATTGGAGTTTCAACCGGATCCAATCGACTGAAACCTTACCATTACATCCCCAATCCAAATTAAGCCAGAGTTTTCGCGGGAGGGGACTGGGGTCTGGGGGTGGGTGTGTGTGGGGGTGAGGGGGCTCACCTGGAGGGCGTGCTTGTTCTGCTTGAACTTGCGGAACCTGCGGACGCAGAAGAGGACCTGCTCCTCCGAGAGCGGGCGCCTCTCGCGGAGCCACCGGCCGAGCTCCTCCACCATTCCACCCGACGGCAGGTGCGCCGACAGCCTCGCGTAGAGCGCCCACTTCGCACCATCCAGCGGTCGCCGCTCCGGGCTCGCGTACTGGAGACCGCGCGCTTGTCTCCTCGGGGCCTGTGACTGTGAGAGGCGCCGGAGCGCCGCCGTGGCCGCCGCGCGCAGCATCGCTAGGCGCTAGGCAGTTCTTTTGGTTTTGGAGGATCTGGGATTTTTTTTTTTCTCTTTTTGAGAGGGTTTGGGGTTTT More
CDS seq		ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCTCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAAGTGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAAAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA More
Protein seq		MLRAAATAALRRLSQSQAPRRQARGLQYASPERRPLDGAKWALYARLSAHLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRTFCIFAKFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTEGVES
Function		Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [UniProtKB/Swiss-Prot:Q9FZ24]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0185100	OsMH63_01T0185100.1	Chr01	11369433	11374502	-	maker
CDS seq	ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCTCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAAGTGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAAAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA More
Protein seq	MLRAAATAALRRLSQSQAPRRQARGLQYASPERRPLDGAKWALYARLSAHLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRTFCIFAKFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTEGVES More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0185100	OsMH63_01T0185100.2	Chr01	11369433	11372312	-	maker
CDS seq	ATGTTTTCATGTTTACAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAAAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA More
Protein seq	MFSCLQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRTFCIFAKFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTEGVES More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0185100	OsMH63_01T0185100.3	Chr01	11369433	11374502	-	maker
CDS seq	ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCTCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAAGTGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAAAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA More
Protein seq	MLRAAATAALRRLSQSQAPRRQARGLQYASPERRPLDGAKWALYARLSAHLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRTFCIFAKFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTEGVES More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.1346625	1.610685	2.0927595

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0301700	RBH	0.335558	0.218307	0.901364
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g19548	RBH	0.179148	0.227830	0.185865
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0301700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0013850	RBH	0.000000	2.933087	2.688399
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0013610	RBH	0.000000	0.000000	0.585845
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0013860	RBH	0.952252	0.0	0.653232
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0013340	RBH	0.0	0.155535	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0013460	RBH	0.0	2.160072	0.076573
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0013380	RBH	0.0	0.105383	0.067004
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0183300	RBH	1.1148765	1.1534995	9.2855725
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0013370	RBH	0.000000	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0013440	RBH	0.120317	1.992765	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0013430	RBH	1.203521	8.081902	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0013540	RBH	0.020778	0.372701	0.151853
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0013220	RBH	0.077364	0.914687	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G013540	RBH	0.310258	0.586692	0.212690
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0013310	RBH	0.844416	0.0	1.640924

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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