Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0008400 | OGI:02017480 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:6163910-6175605 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagtgttcttccactccagtttgcatgaacctcgcaatgagccgcatcacattctcatacgaggagcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcctctcctcggcctcctcgccgccgccgtccatcagcaccgacaccacccgcgcgacgtcaccccgatcaactgtcaaggactcctcgttcaacatgctcaccggcgccgtcacgccgatcggcacgccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtggccacgtcgccacgggcacgccacgggcgatggcctccagcagcgagttccacccgcagtgcgtgaggaagccaccgacggcgcggtgcgacaggatggtcacctgcggcgcccacccgcgcaccacgaggccgcgcgtcgcggttcgcgccatgaactcgtccagccattcctgcacctccggcctggacgaagcttccgactccttcaccacccagaggaacggcttgccggagtcctcgaggccattgccgacctcgaacaggtgcttcggaagctttcgcaggacgctgccgaagctgacgtagacgacggagccggtgacctgctcgtcgagccacgcggtgatcgcgcgcaggtccgtgctcccagtcccacacgaagccatggcctcgtcgtcccggttgtgcaagcagagcgggccaagcgtccacaccggcttgccgagtgccgcctcgtagcacgccacgaactgagcctcgaggtccaggaaggtgttcaccaccacgccgtcggcggcgagcatcgcctcgatggcctcgtcacggagcgcttcataacccggaaagttaaagaagccgggagccgtgcccttcgtcaccgtcacgcgtaccggcattctaggcacgacgtaggtcgtctcctgttcgtcgtcggcgacgatctgctcgtgaagaccatgcacgacggcgttgaggtcgcagagcgagtagaagcacgacggcccgtggaagaagagccgcgggatgccgagcctccaggcaactccggcggcccacgtgttgcaccagtcggagatgatgcagctcgggcgccgctccagagcgcgcacgtaggcctcgaagggcgcgtcgagggcgcgcatggcgatgagaaagggcgtgagctgcgcgtcctccgagagcttgtcggcgttctggcagtccgacggcaggcctgccacggccggcgagaacgggagctccacgatctcgaggggcagcttctcgcgcgcggccttgtcagcgacgccgcgcagcctcgtggcgttcagcggcgtcgtgacgaggctggcgcgtgcgccatgcgcggcgaggagggccgcgagatcgaccatggggatgacgtgaccgtgcgccgcgagaggggcgaggacgaagtgcggctgcggcgaaggcggctgtgttgtggactcagctgtcatcggtgctgtcatcagtgccttctccggtcactgatcatcagtgctctcccagacaccgatttttatgggacttcagaaaaagaagtcaaaggacgacgttagcacatccataaatatctactactccctccatcggaatataagaagttttaggagtgtttaggtgagagttactaaaaaataagtctttttttagagggactaaagacccaaacaccctcttagagttggatatgattattataaaaaatagatagaagtgagtggtggatggttgtgattggatgagtattgaggtagtaggaaaagtgaatggtggagagttacgatttgttgggaagaaaatattgatggaaaagttattatattttagaacaaagataactaatcattatattttgagatgaagagtgtaccgcctgtttgggactctttctccaccgcctatttcttatcctctccctcttcccttgtctcgtagcgctctcatcactccactcagatgcagcagtggcaaaggagcgggagtagagataaaaacaaagcacatagttttatgccagtttattccaaacaaaaagtttttttttctatcacatcgaatgtttgacatatatatggattattaaatatagaaaaaaaataattacagagattgcgtgtaaattacggaacgaatcttttaagcctaattactccctgatttgacaatgtagtgttacagtaaatatttgctaatgataaattaattaggtttaataaattcgtcccgcagtttacaggcggaatctataatttgttttattattagtctacgtttaatactttaaatgtatgtccgtatattcgatgtgccacaccaaaacttttctgcttgcgaactaaacaggccttagtccgttccgaagaaaaaataaatacatatatcgtcaggagcagataattttcgaatattctgatacggatacgaatagttaagcaacaagaatcaggcttgatttgcttttcgattcaggcaagataatagctgacttttagtttttttaaaaaaatacccgtgcgttgcaacgggcgaaggttattttaatcttatcattattataaggtttagtaaaggtgaaattcactgtgggaattcgctttcaaaaatcatgagctgcaattaggagtctgattgtctcaatttagcatgcgagttttttttatgcgactccttctgtattttcaaaagcgaacaaatttaaaaatttactaaaatacgaatatgtatttaaaaagcgaatgaacttaaaaccgactcatacacggataacgtaccaaaatatcagcaaatatatatttatcttttatatatataatagtagagtacaataatagctagatagagatatatagatatatattcctgaaataaaagatatatagatatatataacatgagtttatttgtacttgtagatgtttttttagccgctaaaagggggcgtggctaatgggtgggtgatcgcccacagcgatcacccccatcccccctatacgctcctcctctctcccttcctcctccccttcttctcttcctactacactataaatttaaaaaaaataaaaagcaaagttgaaaaaaattatgtatagaaatactatatatataaaaaattgaatttaaattcaaattcgaaacgggtatgtaaacttttgacttataaactttggtctataaactaatatttaaattcaaatttaaatttgaaacgggtatgtaaacttttgacttataaactttgggtctataaactttagatgtatagaaatactatatataaaaaatatttgaattcaaattcaaatttgaatcggatatataaacttttgacttataaactttgggtctccaaattttagatgtgtaaatttaaggtgtacaaactttagatgtataaatttattaaaatagaaaagtaatacggtgctaaaaaaggaaaacacgtggagaaagagggggagggtaatcggctgatcgctaagggcgatcgccccttagccttttcggctaaaaggggttctcatcaacggagcggatgtgcttgtagctgtttggtgcaaaatgcaaatagattggaattgtcaagggcatgggcctgcatgcaagctacgtgggcctagttaaaagcgtcctagacgtgtgaacagtatgggaaaggaatacggacgctatgaatcgaacagaaaatatgtgtgcgcctgcgtagcaaaaaaaagtcgtgcaccaacgtaggaaaatacgcgtgcgagggagcaaataatcaggcgagcgacgaacgaaattattgaaaaaacatcttttataatagataaagataaagataaagattggtgcatttatccgtgaaatccttgaaattttccattattcttttgttaaatttacctataacttcgtaagaaagacattaattagcaatgcatcacctgcacctatctgctatatatgtagggagcgtatcctatgcacacaggccctcgcgtgtacacaccgtgtacaccagctaaaaattatcacaaaaaattctaggaaaattcatacatgtactttcaatagtattacatctacgtgcaaagtcgcatcttcaaattcattctacatagagaataacaaaaaagataaaattctgacaaaattacaaccttaaaactgtcagatttttttgttttttttgttacggctaaaatataatgaatttgacgttaagattttaaccctaggtgtaatacaattgaaagtatgggtatgattttttctagattttttggtgatattttttagttggtgtacacgtgtgtacacgtgagggcctgtgtgcataggatatgttgccatttatgtaagtcacatttgtatacgggcctctacatctaattggatatatacagccttttaaatagaaaacttagtctcacaaataacctaatttgaaattcgcttctattgagatctgaactcaaaatcttgggacattacttaggtcattccaaccactaaattatatgccctttcccaagcgctagcctaatttgatcaggcgcacgccactagccaccgcgcccgcacatgttttctaaatgagactgtttatcctacatagttgatagaaaaacccatctaatctatactttctatataatataatatagttgttatcaattaacttctaaatcctaacgtgcaaaagtgtgcatgtgtgccactaacagattcttatggattcatatgttttcgttcaagtactgccctgacgttacaattgtgatcagttaatcacagactatggttcagaatcttcaatcctagggtgtgtttagttcacgctaaaattagaaatttggttgaaattggaacgatgtgatagaaaaattgaaagtttgtgtagaaagttttgatgtgatgaaaaagttaaaagtttaaagaaaaagtttggaactaaattcggctttttgccggccgaaggaagggccatccaattttattaagatttgggggatagttactacatagctatgcatatacgggtaacaaacatcgacaggagactgtcgagaccaaacagaaaaaactgtccgacaacagccgggccagcgatatgaactactcatcgagttaaagtgttaaaatgtttttgactggagttaattgataaccaccgaggcaagtgtacaccagagcaatgcatcccttcatacggccacctctttaattacacgcaacaggaatattccatgaagcatgcatgcagaaacaattgggattaaagagcatcagagtttaggctcctttaaaattcatagaaattttggaggattttattcctatagaaatttttcctataaagccttttgaatcaaaggaatgaaccctatggaattctatgaaattcctatggaatgcctcttcccatataagttttggaggaattttaataagaggtaaaacctcatgaaagaaatcctttgagtctttatctctcctcaaattactgtgtctttcctgtggtccaatcaaacggtcattcctatgtttttcctgtgttttgcaatcttctgttttacactttcattcctgtcagaatcttatgtttttcctattcctccgttttttcattgctgtgattcaaagggcccttgcagtgaaagcgaaggcttctgcttctccatcaaatccgtatcacttttctcatgttcaactctgcagcagcacaaagctagcatgtcagtgcagtagtgcacatggtgagctcggaattaattctacctgtgttgctactgaatgtaggtagctgatcgatgaataatgtaattattgaaatcaagtagatgaaaaatctcccttcttaaatttcacaggaaaagatggagagatacaaattggtaccactagcttttttatatagtataagagttgagaccatttaaattatggttttgttagaaccatctgtccttttctgtgatacaaacaaccgtatttaagaaatcacttgctctttccgaaacttcatagttaattcctagatggttgcggccggtaagcacgtgccgtcgattgaatttgacttctctgtgctctaatagcaagaataaagccatatctcctataggagacaaactatgatctgtacctcaaatgtcagcatgcataataataagatgatggctaaagagagaactacagagttacatttactcaggtccaacaactagtacatctattatatatgcattgaattgttagtagtatatattacggtcacatactcaattgggatccatcaaaattgcactacaagccgaagtttccatgaactacgaagaaatagcatgtgtacacgaatttgcggtgcttgcagttagtcgagacttagagacatcagacatgaggaattcagcgtgcacggataggaggagtcatgcttccaccccatcttagcgatgcccctatgatactttaggtgcttgatcttctctatagttttaactttggatcaaatttgaatgtggtccattgctcatagtactacttttttttagataatggaataaacatcccggcctttgctcatcagagttacagccaattattacaaagtaccactctaacaaagagtgtaggcagtcgcactgagtcctaatactatgttagataacatcccacaccacaagaattttctagtggattttgtcactgcatgtttctgtttctccttgtttgatattgctgttttccttaacttttttttcataaattttgcatatatttttttgtgtgatatgttatcaatttgtctaaaacataggtcgtcaacttcctaaacaaaactgaaaccaataattgtatcactatattcttttagttggcaactttggcagtacggaatgccaatatatacacttccagagaacactttaggcagaagagtaactaaattaattaccaaaaagaactgaaaatgactgaaatgtgcaattgaatatgggaacacgtggaacacggaacagtagacaaatacagatatatattacgtaactgttaggtctctacttgtaataaaaatcaaagatgttttcggaaagtagcactataaatgtaattcccatttgcacaatttggaggctatttgcatataaatatcgactatttgcagctggaaataataattattcaacggcctgtccattttgtgcaaatgcccacatgcacagcagcacattgtgacaatatttatcatggttttttgaaaaaaagaagttcccatttttctgcaaaacggttagctctttcagcctcattttctacaaaacagtggaccgatgttaatttaataattctcttgcgacccctgttttctgcaaaacagttagttagtcgtcacaaattgccaaaatgttttgttccagggatgcaaatatcatcagccactaggctgcctgtgtctgtgtgtatatgtgtgtttttttttctttgaagatctaataattgtgttttgttgccagttaggtcctcctagaacgtatacccagtgactgtacttgtggctatgctctcagctggaacactgtacgggtttgtttagtttagagctaatttttgtcctatcatccctaaaaaaatatcttgtcttaccaaaactttaacaacttcaacggtacgtatcaaataaatgtttagtttgttaccaacttttatacacactagttcaaatttttatactaaattgatagtggcaaaacttatgaaggttttggcaccactaaaataaaattttgataggaaaaaattaactctaaaccaacgagccctacatttcaacatccttaggatcgagcaagaaaacctcacaagtagtgcttctatcattctctctcactaatcagacgcaaacaaaaattgaaagcgattgtgttctaaaaagcttcagacacaaggtttatcttcaacttaattacgtgatctttcaggcactatgtagtattagaaaggcaagatgaaaacgattacatgtagaaatcaacctgtcgtagtaccacaattatgcgaatcaacatcaaatctggtctggcgttcatgcgtggctagctagctgctaactgcttgactgggactgatactgtccactacatgaggaagaaagcacaagccaagaaacacacgcaagcaagcatgcaccgtcaatcatttttcatttttgtggtgccccagtgaaggtctctgcaaccatcacaagcttcgggtgttttttcttttcaataataaatctacagtccactgaatcctgacctctataatcatctcaagacgatgattggtgacaaacatttgtggcgctaaattaaatcttgggacaaatatgtgtactaccaccatcctaaaattattgtcgttctattgtcgttctagattgtttggcaaaatgtaagttttacaagaaaaagaaaatatcatagtacccctattaaatagtgcatggatgggagtgacgatgtagttcggggtaagatagggaaaattttgaattgaaaatgattgatgtaaaaaaaagctccaaagtgacaagaattttgagataaaattcaaatcctagctagagcgacaacttatatatttaggacggagggagtaattatatttatgacattatattttttaaaaaaatcatgttgcttttatacattataaatttaattaaaaacttattgaaggattacattataaattttagtatttctattattttttctaatatgtagatagaattagggttaacaataatttattatctacttgagcatgtattttctaaaagtgattcaaattaaaggaaaaatgtggtaccatacttttagcaaacccaattataaataaagccaatatatcgtacaagttttgcaagataatcaaatgtctcctgtaataaaaatcgcactcctaccgtctcattagaaaaaactgagtatttttttatcaagggggaactattttaaatgtacatgtgcgaattagaccctttttcctgatctaatatacaatcgagaacgtggagggcgagaaaagggattcaggaacactacagagatctgattgcaccgacttatagcatcatcaggccatcagcaggtatcctgcaaagcaataatcaatctagtgttagtcttagacttttgtctcatgaaaatgacaaaagcactgtcatacacacaaggagaacaagcaaatggtcattattggtttattagatcgagagatccaaggaaggcatcacaagtggcaaagagttctttgtcttttctagatgaatagaaacactgagctcacgtattcttttaagaaacacagtataaatacaaacgctaacaacacatatatactcacccttaataactcatgcacgtgcactttacctctatatatgtgcacctccgaaaaaataggccgacacactttaacattgaacgcttcattgtcgatgaatacattgctctaacactaaaataataattagttgtaaatataagtatccgtgttaagtctacgacttaaatctgattagactattaaaaaaatctaatcacttaagctatgctcacttcgcagcattgagctcacttgttaacggcagactcgttgaaacatacagatgatctgattgtggagagaattgcaaggtgatcatatattcctatggtggacaaaggtgaaacatgagaggccacaaagctgacaaccttataccctgataacaaccagataaaatgttcaggtagagcaatttcaaagtagtgcagaaattggtcgcctgagaaaaagccaacaattcctagccaagaaacaaagaaaccgaacaaatctttggttccaactagaaatattctgatttctgaaaaggcatgcatttcttggattctcagcccacattgtgaagaaagtctgttcactactagaattacattatccattaacttcttcagaataagaaacacagatcacttgaagaagtaaatcagtgcaaatctgatgccaacagaaaggaaaaatattcagaaaacagtgtaacttctggattcaaatgtgcttttgtttgcacctccactgtttactgttctggagcgttcttggctccctgcagggtgaagctgtgtatcagctgcgtcaggctttcgtacgaggatcctcctttctccatggctctacgagctttctccccgtactccttcgccttcctcctcctctcgccggcctcctcgccgccgtccatcagcgcagtcaccgcccgcgcgacgtcaccccgggtgaccgccatggcctcgtcgccgaacagcagcacgggcgtcgtcacgccgaccggcacgccgacgccgagcacgtcgacggcgagccgctcgttcaggaactggtcggagaagtgcggccacgtcacgacggggacgccatgggcgatggactccagcatcgagttccagccgcagtgggtgacgaagccaccaacggcgcggtgcgacaggatggcgagctgcggcgcccagccgcggaccacgaggccgcgcctcgccacgcgcgcttccagcgcggacagccattcttgcacctccggcgtggccacctccgactccttcaccacccagagaaatggcctcccggtgtcctcgaggccatggccgacctcgaacaagtacttggggaccttgcgagcgaggctgccaaagttgacgtagatgacggagtcggtgtccatggcgtcgagccacgtggtgaccgcgctctgggcgacgtcaggcatgttcccgcgcgacgccatggcgtcggcgtcccggttgtataggcagaacggcccaagcgtccacaccggcttgccgagcgccgcctcgtagcacgcgatgaactcgtcctcgaggtccaggaacgtgttcaccacagcgccgtcggccgtgcgcatggcctccatggccgcgtcccgtaggtcctcccaccctggcgagttcaagaatcctggttgcgtgtccttggtcacctccacgcgcaccggcatgcccggcacgacgtacctgtcgtcgtcggcctgctgctgcagcccgtgcgcggcggcgttgaggtcgcagagggagtagaagcacgacgggccatggaagaacagccgcggcacgccggcgcggcgcgccacgccggccgtccacgagttggaccagtcagagatgatgcagctgggcggcgccggcagcgcgcgcaggtacgcctcgagcggcgcggcgagctcgcgcatgacgtcgaagaacggacggaagtgggcgtagtcagtgatctggtcgacgttctcgacgcccggcggcaggccggcgtcggcggccgacggcgggaacgggacctccactatctcgagcggcagcttggcgcgcgcggcgaggtcggcggcgccgcgcaggcgcgcggcgttcacgggcgtgacgacgaggctggcgcgggcgccgcgctccgcgaggaggcgcgcgaggtcgaccatggggatggtgtggccttgcgccggcaaggggacgatgacgaaatgcggcggtggcggcggcggcggtgacgtagcagaaacggactccggcgtgggcgccatggtgggcacgagagcggtgcgagtggcagccaaaaaagcttttgatggtgcggctggtgt
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| CDS seq | atggcgcccacgccggagtccgtttctgctacgtcaccgccgccgccgccaccgccgcatttcgtcatcgtccccttgccggcgcaaggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgcccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgcctgcgcggcgccgccgacctcgccgcgcgcgccaagctgccgctcgagatagtggaggtcccgttcccgccgtcggccgccgacgccggcctgccgccgggcgtcgagaacgtcgaccagatcactgactacgcccacttccgtccgttcttcgacgtcatgcgcgagctcgccgcgccgctcgaggcgtacctgcgcgcgctgccggcgccgcccagctgcatcatctctgactggtccaactcgtggacggccggcgtggcgcgccgcgccggcgtgccgcggctgttcttccatggcccgtcgtgcttctactccctctgcgacctcaacgccgccgcgcacgggctgcagcagcaggccgacgacgacaggtacgtcgtgccgggcatgccggtgcgcgtggaggtgaccaaggacacgcaaccaggattcttgaactcgccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcgctgtggtgaacacgttcctggacctcgaggacgagttcatcgcgtgctacgaggcggcgctcggcaagccggtgtggacgcttgggccgttctgcctatacaaccgggacgccgacgccatggcgtcgcgcgggaacatgcctgacgtcgcccagagcgcggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggacaccgggaggccatttctctgggtggtgaaggagtcggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaagcgcgcgtggcgaggcgcggcctcgtggtccgcggctgggcgccgcagctcgccatcctgtcgcaccgcgccgttggtggcttcgtcacccactgcggctggaactcgatgctggagtccatcgcccatggcatcgtggagctcccgttctcgccggccgtggcaggcctgccgtcggactgccagaacgccgacaagctctcggaggacgcgcagctcacgccctttctcatcgccatgcgcgccctcgacgcgcccttcgaggcctacgtgcgcgctctggagcggcgcccgagctgcatcatctccgactggtgcaacacgtgggccgccggagttgcctggaggctcggcatcccgcggctcttcttccacgggccgtcgtgcttctactcgctctgcgacctcaacgccgtcgtgcatggtcttcacgagcagatcgtcgccgacgacgaacaggagacgacctacgtcgtgcctagaatgccggtacgcgtgacggtgacgaagggcacggctcccggcttctttaactttccgggttatgaagcgctccgtgacgaggccatcgaggcgatgctcgccgccgacggcgtggtggtgaacaccttcctggacctcgaggctcagttcgtggcgtgctacgaggcggcactcggcaagccggtgtggacgcttggcccgctctgcttgcacaaccgggacgacgaggccatggcttcgtgtgggactgggagcacggacctgcgcgcgatcaccgcgtggctcgacgagcaggtcaccggctccgtcgtctacgtcagcttcggcagcgtcctgcgaaagcttccgaagcacctgttcgaggtcggcaatggcctcgaggactccggcaagccgttcctctgggtggtgaaggagtcggaagcttcgtccaggccggaggtgcaggaatggctggacgagttcatggcgcgaaccgcgacgcgcggcctcgtggtgcgcgggtgggcgccgcaggtgaccatcctgtcgcaccgcgccgtcggtggcttcctcacgcactgcgggtggaactcgctgctggaggccatcgcccgtggcgtgcccgtggcgacgtggccacacttcgccgaccagttcctgaacgagcggctcgccgtggacgtgctcggcgtcggcgtgccgatcggcgtgacggcgccggtgagcatgttgaacgaggagtccttgacagttgatcggggtgacgtcgcgcgggtggtgtcggtgctgatggacggcggcggcgaggaggccgaggagaggaggaggaaggccaaggagtacggtgagcaagctcgaagggccatggcgaaaggaggctcctcgtatgagaatgtgatgcggctcattgcgaggttcatgcaaactggagtggaagaacactag
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| Protein seq | MAPTPESVSATSPPPPPPPHFVIVPLPAQGHTIPMVDLARLLAERGARASLVVTPVNAARLRGAADLAARAKLPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSLCDLNAAAHGLQQQADDDRYVVPGMPVRVEVTKDTQPGFLNSPGWEDLRDAAMEAMRTADGAVVNTFLDLEDEFIACYEAALGKPVWTLGPFCLYNRDADAMASRGNMPDVAQSAVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDTGRPFLWVVKESEVATPEVQEWLSALEARVARRGLVVRGWAPQLAILSHRAVGGFVTHCGWNSMLESIAHGIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEQARRAMAKGGSSYENVMRLIARFMQTGVEEH |
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| Function | UDP-glycosyltransferase 73C3 [UniProtKB/Swiss-Prot:Q9ZQ96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0008400 | OsLima_02g0008400.01 | Chr02 | 6163910 | 6175605 | - | NAM | ||
| CDS seq | atggcgcccacgccggagtccgtttctgctacgtcaccgccgccgccgccaccgccgcatttcgtcatcgtccccttgccggcgcaaggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgcccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgcctgcgcggcgccgccgacctcgccgcgcgcgccaagctgccgctcgagatagtggaggtcccgttcccgccgtcggccgccgacgccggcctgccgccgggcgtcgagaacgtcgaccagatcactgactacgcccacttccgtccgttcttcgacgtcatgcgcgagctcgccgcgccgctcgaggcgtacctgcgcgcgctgccggcgccgcccagctgcatcatctctgactggtccaactcgtggacggccggcgtggcgcgccgcgccggcgtgccgcggctgttcttccatggcccgtcgtgcttctactccctctgcgacctcaacgccgccgcgcacgggctgcagcagcaggccgacgacgacaggtacgtcgtgccgggcatgccggtgcgcgtggaggtgaccaaggacacgcaaccaggattcttgaactcgccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcgctgtggtgaacacgttcctggacctcgaggacgagttcatcgcgtgctacgaggcggcgctcggcaagccggtgtggacgcttgggccgttctgcctatacaaccgggacgccgacgccatggcgtcgcgcgggaacatgcctgacgtcgcccagagcgcggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggacaccgggaggccatttctctgggtggtgaaggagtcggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaagcgcgcgtggcgaggcgcggcctcgtggtccgcggctgggcgccgcagctcgccatcctgtcgcaccgcgccgttggtggcttcgtcacccactgcggctggaactcgatgctggagtccatcgcccatggcatcgtggagctcccgttctcgccggccgtggcaggcctgccgtcggactgccagaacgccgacaagctctcggaggacgcgcagctcacgccctttctcatcgccatgcgcgccctcgacgcgcccttcgaggcctacgtgcgcgctctggagcggcgcccgagctgcatcatctccgactggtgcaacacgtgggccgccggagttgcctggaggctcggcatcccgcggctcttcttccacgggccgtcgtgcttctactcgctctgcgacctcaacgccgtcgtgcatggtcttcacgagcagatcgtcgccgacgacgaacaggagacgacctacgtcgtgcctagaatgccggtacgcgtgacggtgacgaagggcacggctcccggcttctttaactttccgggttatgaagcgctccgtgacgaggccatcgaggcgatgctcgccgccgacggcgtggtggtgaacaccttcctggacctcgaggctcagttcgtggcgtgctacgaggcggcactcggcaagccggtgtggacgcttggcccgctctgcttgcacaaccgggacgacgaggccatggcttcgtgtgggactgggagcacggacctgcgcgcgatcaccgcgtggctcgacgagcaggtcaccggctccgtcgtctacgtcagcttcggcagcgtcctgcgaaagcttccgaagcacctgttcgaggtcggcaatggcctcgaggactccggcaagccgttcctctgggtggtgaaggagtcggaagcttcgtccaggccggaggtgcaggaatggctggacgagttcatggcgcgaaccgcgacgcgcggcctcgtggtgcgcgggtgggcgccgcaggtgaccatcctgtcgcaccgcgccgtcggtggcttcctcacgcactgcgggtggaactcgctgctggaggccatcgcccgtggcgtgcccgtggcgacgtggccacacttcgccgaccagttcctgaacgagcggctcgccgtggacgtgctcggcgtcggcgtgccgatcggcgtgacggcgccggtgagcatgttgaacgaggagtccttgacagttgatcggggtgacgtcgcgcgggtggtgtcggtgctgatggacggcggcggcgaggaggccgaggagaggaggaggaaggccaaggagtacggtgagcaagctcgaagggccatggcgaaaggaggctcctcgtatgagaatgtgatgcggctcattgcgaggttcatgcaaactggagtggaagaacactag
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| Protein seq | MAPTPESVSATSPPPPPPPHFVIVPLPAQGHTIPMVDLARLLAERGARASLVVTPVNAARLRGAADLAARAKLPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSLCDLNAAAHGLQQQADDDRYVVPGMPVRVEVTKDTQPGFLNSPGWEDLRDAAMEAMRTADGAVVNTFLDLEDEFIACYEAALGKPVWTLGPFCLYNRDADAMASRGNMPDVAQSAVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDTGRPFLWVVKESEVATPEVQEWLSALEARVARRGLVVRGWAPQLAILSHRAVGGFVTHCGWNSMLESIAHGIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEQARRAMAKGGSSYENVMRLIARFMQTGVEEH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0008400 | OsLima_02g0008400.02 | Chr02 | 6173822 | 6174611 | - | IsoSeq | ||
| CDS seq | ggtcggccatggcctcgaggacaccgggaggccatttctctgggtggtgaaggagtcggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaagcgcgcgtggcgaggcgcggcctcgtggtccgcggctgggcgccgcagctcgccatcctgtcgcaccgcgccgttggtggcttcgtcacccactgcggctggaactcgatgctggagtccatcgcccatggcgtccccgtcgtgacgtggccgcacttctccgaccagttcctgaacgagcggctcgccgtcgacgtgctcggcgtcggcgtgccggtcggcgtgacgacgcccgtgctgctgttcggcgacgaggccatggcggtcacccg
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| Protein seq | GRPWPRGHREAISLGGEGVGGGHAGGARMAVRAGSARGEARPRGPRLGAAARHPVAPRRWWLRHPLRLELDAGVHRPWRPRRDVAALLRPVPERAARRRRARRRRAGRRDDARAAVRRRGHGGHP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.275004 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0206100 | RBH | 8.413288 | 9.778836 | 2.761018 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11130 | RBH | 0.815880 | 0.742404 | 0.186394 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0206700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008170 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008280 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008000 | RBH | 5.277094 | 0.0 | 0.394575 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008000 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008090 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100800 | RBH | 4.843346 | 0 | 0.2125995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007980 | RBH | 0.0 | 0.0 | 1.778665 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0103800 | RBH | 6.6460495 | 4.4753855 | 0.014996 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008440 | RBH | 0.013563 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008020 | RBH | 1.861785 | 1.673705 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008300 | RBH | 7.613987 | 3.509864 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008260 | RBH | 1.610988 | 0.0 | 0.128080 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008040 | RBH | 0.689381 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008160 | RBH | 0.173433 | 0.491939 | 2.452634 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008150 | RBH | 3.330182 | 0.0 | 1.485300 |
