Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_02g0008300 | OGI:02017510 | 14/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr02:6016865-6018663 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggttccaactagaaatattctgatttctgaaaaggcatgcatttcttggattctcagcccacattgtgaagaaagtctgttcactactagaattacattatccattaacttcttcagaataagaaacacagatcacttgaagaagtaaatcagtgcaaatctgatgccaacagaaaggaaaaatattcagaaaacagtgtaacttctggattcaaatgtgcttttgtttgcacctccactgtttactgttctggagcgttcttggctccctgcagggtgaagctgtgtatcagctgcgtcaggctttcgtacgaggatcctcctttctccatggctctacgagctttctccccgtactccttcgccttcctcctcctctcgccggcctcctcgccgccgtccatcagcgcagtcaccgcccgcgcgacgtcaccccgggtgaccgccatggcctcgtcgccgaacagcagcacgggcgtcgtcacgccgaccggcacgccgacgccgagcacgtcgacggcgagccgctcgttcaggaactggtcggagaagtgcggccacgtcacgacggggacgccatgggcgatggactccagcatcgagttccagccgcagtgggtgacgaagccaccaacggcgcggtgcgacaggatggcgagctgcggcgcccagccgcggaccacgaggccgcgcctcgccacgcgcgcttccagcgcggacagccattcttgcacctccggcgtggccacctccgactccttcaccacccagagaaatggcctcccggtgtcctcgaggccatggccgacctcgaacaagtacttggggaccttgcgagcgaggctgccaaagttgacgtagatgacggagtcggtgtccatggcgtcgagccacgtggtgaccgcgctctgggcgacgtcaggcatgttcccgcgcgacgccatggcgtcggcgtcccggttgtataggcagaacggcccaagcgtccacaccggcttgccgagcgccgcctcgtagcacgcgatgaactcgtcctcgaggtccaggaacgtgttcaccacagcgccgtcggccgtgcgcatggcctccatggccgcgtcccgtaggtcctcccaccctggcgagttcaagaatcctggttgcgtgtccttggtcacctccacgcgcaccggcatgcccggcacgacgtacctgtcgtcgtcggcctgctgctgcagcccgtgcgcggcggcgttgaggtcgcagagggagtagaagcacgacgggccatggaagaacagccgcggcacgccggcgcggcgcgccacgccggccgtccacgagttggaccagtcagagatgatgcagctgggcggcgccggcagcgcgcgcaggtacgcctcgagcggcgcggcgagctcgcgcatgacgtcgaagaacggacggaagtgggcgtagtcagtgatctggtcgacgttctcgacgcccggcggcaggccggcgtcggcggccgacggcgggaacgggacctccactatctcgagcggcagcttggcgcgcgcggcgaggtcggcggcgccgcgcaggcgcgcggcgttcacgggcgtgacgacgaggctggcgcgggcgccgcgctccgcgaggaggcgcgcgaggtcgaccatggggatggtgtggccttgcgccggcaaggggacgatgacgaaatgcggcggtggcggcggcggcggtgacgtagcagaaacggactccggcgtgggcgccatggtgggcacgagagcggtgcgagtggcagccaaaaaagcttttgatggtgcggc
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| CDS seq | atggcgcccacgccggagtccgtttctgctacgtcaccgccgccgccgccaccgccgcatttcgtcatcgtccccttgccggcgcaaggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgcccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgcctgcgcggcgccgccgacctcgccgcgcgcgccaagctgccgctcgagatagtggaggtcccgttcccgccgtcggccgccgacgccggcctgccgccgggcgtcgagaacgtcgaccagatcactgactacgcccacttccgtccgttcttcgacgtcatgcgcgagctcgccgcgccgctcgaggcgtacctgcgcgcgctgccggcgccgcccagctgcatcatctctgactggtccaactcgtggacggccggcgtggcgcgccgcgccggcgtgccgcggctgttcttccatggcccgtcgtgcttctactccctctgcgacctcaacgccgccgcgcacgggctgcagcagcaggccgacgacgacaggtacgtcgtgccgggcatgccggtgcgcgtggaggtgaccaaggacacgcaaccaggattcttgaactcgccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcgctgtggtgaacacgttcctggacctcgaggacgagttcatcgcgtgctacgaggcggcgctcggcaagccggtgtggacgcttgggccgttctgcctatacaaccgggacgccgacgccatggcgtcgcgcgggaacatgcctgacgtcgcccagagcgcggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggacaccgggaggccatttctctgggtggtgaaggagtcggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaagcgcgcgtggcgaggcgcggcctcgtggtccgcggctgggcgccgcagctcgccatcctgtcgcaccgcgccgttggtggcttcgtcacccactgcggctggaactcgatgctggagtccatcgcccatggcgtccccgtcgtgacgtggccgcacttctccgaccagttcctgaacgagcggctcgccgtcgacgtgctcggcgtcggcgtgccggtcggcgtgacgacgcccgtgctgctgttcggcgacgaggccatggcggtcacccggggtgacgtcgcgcgggcggtgactgcgctgatggacggcggcgaggaggccggcgagaggaggaggaaggcgaaggagtacggggagaaagctcgtagagccatggagaaaggaggatcctcgtacgaaagcctgacgcagctgatacacagcttcaccctgcagggagccaagaacgctccagaacagtaa
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| Protein seq | MAPTPESVSATSPPPPPPPHFVIVPLPAQGHTIPMVDLARLLAERGARASLVVTPVNAARLRGAADLAARAKLPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSLCDLNAAAHGLQQQADDDRYVVPGMPVRVEVTKDTQPGFLNSPGWEDLRDAAMEAMRTADGAVVNTFLDLEDEFIACYEAALGKPVWTLGPFCLYNRDADAMASRGNMPDVAQSAVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDTGRPFLWVVKESEVATPEVQEWLSALEARVARRGLVVRGWAPQLAILSHRAVGGFVTHCGWNSMLESIAHGVPVVTWPHFSDQFLNERLAVDVLGVGVPVGVTTPVLLFGDEAMAVTRGDVARAVTALMDGGEEAGERRRKAKEYGEKARRAMEKGGSSYESLTQLIHSFTLQGAKNAPEQ |
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| Function | UDP-glycosyltransferase 73C3 [UniProtKB/Swiss-Prot:Q9ZQ96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_02g0008300 | OsGoSa_02g0008300.01 | Chr02 | 6016865 | 6018663 | - | NAM | ||
| CDS seq | atggcgcccacgccggagtccgtttctgctacgtcaccgccgccgccgccaccgccgcatttcgtcatcgtccccttgccggcgcaaggccacaccatccccatggtcgacctcgcgcgcctcctcgcggagcgcggcgcccgcgccagcctcgtcgtcacgcccgtgaacgccgcgcgcctgcgcggcgccgccgacctcgccgcgcgcgccaagctgccgctcgagatagtggaggtcccgttcccgccgtcggccgccgacgccggcctgccgccgggcgtcgagaacgtcgaccagatcactgactacgcccacttccgtccgttcttcgacgtcatgcgcgagctcgccgcgccgctcgaggcgtacctgcgcgcgctgccggcgccgcccagctgcatcatctctgactggtccaactcgtggacggccggcgtggcgcgccgcgccggcgtgccgcggctgttcttccatggcccgtcgtgcttctactccctctgcgacctcaacgccgccgcgcacgggctgcagcagcaggccgacgacgacaggtacgtcgtgccgggcatgccggtgcgcgtggaggtgaccaaggacacgcaaccaggattcttgaactcgccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcgctgtggtgaacacgttcctggacctcgaggacgagttcatcgcgtgctacgaggcggcgctcggcaagccggtgtggacgcttgggccgttctgcctatacaaccgggacgccgacgccatggcgtcgcgcgggaacatgcctgacgtcgcccagagcgcggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggacaccgggaggccatttctctgggtggtgaaggagtcggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaagcgcgcgtggcgaggcgcggcctcgtggtccgcggctgggcgccgcagctcgccatcctgtcgcaccgcgccgttggtggcttcgtcacccactgcggctggaactcgatgctggagtccatcgcccatggcgtccccgtcgtgacgtggccgcacttctccgaccagttcctgaacgagcggctcgccgtcgacgtgctcggcgtcggcgtgccggtcggcgtgacgacgcccgtgctgctgttcggcgacgaggccatggcggtcacccggggtgacgtcgcgcgggcggtgactgcgctgatggacggcggcgaggaggccggcgagaggaggaggaaggcgaaggagtacggggagaaagctcgtagagccatggagaaaggaggatcctcgtacgaaagcctgacgcagctgatacacagcttcaccctgcagggagccaagaacgctccagaacagtaa
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| Protein seq | MAPTPESVSATSPPPPPPPHFVIVPLPAQGHTIPMVDLARLLAERGARASLVVTPVNAARLRGAADLAARAKLPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSLCDLNAAAHGLQQQADDDRYVVPGMPVRVEVTKDTQPGFLNSPGWEDLRDAAMEAMRTADGAVVNTFLDLEDEFIACYEAALGKPVWTLGPFCLYNRDADAMASRGNMPDVAQSAVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDTGRPFLWVVKESEVATPEVQEWLSALEARVARRGLVVRGWAPQLAILSHRAVGGFVTHCGWNSMLESIAHGVPVVTWPHFSDQFLNERLAVDVLGVGVPVGVTTPVLLFGDEAMAVTRGDVARAVTALMDGGEEAGERRRKAKEYGEKARRAMEKGGSSYESLTQLIHSFTLQGAKNAPEQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 7.613987 | 3.509864 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0206700 | RBH | 0.959043 | 1.701500 | 7.476883 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11640 | RBH | 0.623804 | 1.105044 | 1.935357 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0206700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008140 | RBH | 0.093969 | 3.893963 | 1.255846 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008250 | RBH | 0.328714 | 2.673809 | 1.821301 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008040 | RBH | 0.0 | 11.073485 | 3.551407 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0007990 | RBH | 0.157112 | 0.274768 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008050 | RBH | 9.469552 | 1.894069 | 6.673234 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100200 | RBH | 13.6418335 | 0.119017 | 7.552457 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007980 | RBH | 0.0 | 0.0 | 1.778665 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0103900 | RBH | 50.0662545 | 0.023906 | 0.211048 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008400 | RBH | 1.275004 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008020 | RBH | 1.861785 | 1.673705 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0020820 | SBH | 5.920506 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008300 | RBH | 0.504812 | 0.118909 | 2.154278 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008050 | RBH | 0.130605 | 1.536474 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008160 | RBH | 0.173433 | 0.491939 | 2.452634 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008160 | SBH | 2.523702 | 2.288974 | 8.975902 |
