Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_02G0103800		OGI:02017480 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr02:6043723-6047410		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		CGTACCAATTTGGAAACAAATTATGTGAGGCAGCTTTTGATTGCATTTGGAAAATCACTTACAGAGTACTTAATAAAAGCACAGAGGACCTTTATATCACTTTCATCATAATTCAATCACTCCCAGAGTACTTACAAAAGAACCTACAGGAACTATACATCACTTGCATATATACTTCTAGTTACATATATTGCAGAACATCCAAACCCCTGTAGAGGCAGCCAACACAGAGAAGTGTCACTTCGTCGGTCCTAAAATTGCTCACCAGATTGAGGCATAGCTCCTGCGTGACTGCGTCTGCTGGTTGCTTGTCGTCGCGACAGAAGGTCCGGCGGGGATCCCCTGTACTCGTCGCGTCCGGCGGAGGCGGCGCCGCTGGCTGTGGACGAGGAGGGGAACAGGGACTTGATGTTGTCGGAGACTTGATCAGTGCCCAGCGAATGTGGAAGGAAGGAGCCAGCAGCGGACGCGGCACTGGTCATGGCGCCGCCGGTGTTGCCGAACCTGTAAGACGTTGAGGTCGTCTGCTCAGTGACCTCGGGCTGCTCCGTCGACGCCGCGGCGGGCAGCGTTGGGGCCTATCTTTCCAATCTTTCTACTCCCTCCGTCCTATAATATAAGGGATTTTAAATTTTTCCTTACACTGTTTGACCACTCGTCTTATTCAAAAAATTTGTGCAAATATAAAAAACGAAAAGTTGTGCTTAAAATACTTTGGATAATAAAGTAAGTAAAAAAATAATTCTAAAGTATTTTAAGTACAACTTTTCGTTTTTTATATTTACACAAATTTTTTGAATAAGACGAGTGGTCAAACAGTGCAAACAAAAACTCAAAATCCCTTATATTGTAGGACGGAGGGAGTACCAAACAATGGGAAAACAGATACATCTGACGAAGAAGTGATTGTAATATAAAAGTTACTAGGGACTTTTCTGTAAAATGAGATGGTCAATCATAATGTGGCATTTTCGCTGAGGTGGAACAATGGCGTGGCAACTTTTGCACTATGAGCGCACCCACCTAGTCAAGTTATTGTACCGCTACGCTCGGTTTTCAAGTTTTTATACCTAATCGCACCCACCTACCAAGTTCTTGTACTGTCAACGTAATTTACTCTAAATTTTATATATTCAAATAATCCCACGCTCATAAGAAAGGCTAATCCCTCTCTGCGTACATGCATACATAAGAGATGTCAAAAAAAAAACAAGAAGAAGATGAGTGTGCATACGATCAGCCCCATCGAGTATTTTTCTCTCTTTCTTTGCAGCTCTAAGGTTTTTCTTCAATTGTGAATATATGTAGTGACCACCCTTGGCAAGGTTGCCGAATAAGACATGCTGCCGCAACACGACTTCACGCCATCTTGCAAATTTTCTTAAAAATATTATTTTATATTGTAAGGCAATTAGAATAAAATCATAACCACTATCCAAACCAGCTGTTAACCATAACATGTTTAAAATGATGTCAAAGAATATTTCAAAAATATTATCCACACATAAATATTCATAATAAAAATTTAAACAACATTAAATGAAATAAGGTGCCTGCACATTTGCGCAGGCTTTCTTCCTGGTTGTAGAAATAGTTATAAAGAAAAATCAACCTTATATTTTTTTTATGTTTTCAAACTAGCTAGACATTGTTTTCTAGAGTTATTGGTGGTCAAAGTTGCTTTAAAAGTTTAGCTGCATAAAGTTAACCATGTCATTAACTATGGAGAGAGCATAGAACAATCTTAATATTTCTAAACTTGTTGCGAAATTATGAGTAATTAAACTCTGGTTACAGATAGTATCAGGTGACAGTTATTCATGAACGGAAGGAGTACAAACAAACCTAGTGTTCTTCCACTCCAATTTGCGTGAACCTCGCAATGAGCCGCATAACATTCTCATACGAGGAGCCTCCTTTCGCCATGGCCCTTCGAGCTTTCTCACCGTACTCCTTGGCCTTCCTCCTCCTCTCCTCGGCCTCCTCGCCGCCGCCGTCCATCAGCACCGACACCACCCGCGCGACGTCACCCCGATCAACTGTCAAGGACTCCTCGTTCAACATGCTCACCGGCGCCGTCACGCCGATCGGCACGCCGACGCCGAGCACGTCCACGGCGAGCCGCTCGTTCAGGAACTGGTCGGCGAAGTGTGGCCACGTCGCCACGGGCACGCCACGGGCGATGGCCTCCAGCAGCGAGTTCCACCCGCAGTGCGTGAGGAAGCCACCGACGGCGCGGTGCGACAGGATGGTCACCTGCGGCGCCCACCCGCGCACCACGAGGCCGCGCGTCGCGGTTCGCGCCATGAACTCGTCCAGCCATTCCTGCACCTCCGGCCTGGACGAAGCTTCCGACTCCTTCACCACCCAGAGGAACGGCTTGCCGGAGTCCTCGAGGCCATTGCCGACCTCGAACAGGTGCTTCGGAAGCTTTCGCAGGACGCTGCCGAAGCTGACGTAGACGACGGAGCCGGTGACCTGCTCGTCGAGCCACGCGGTGATCGCGCGCAGGTCCGTGCTCCCAGTCCCACACGAAGCCATGGCCTCGTCGTCCCGGTTGTGCAAGCAGAGCGGGCCAAGCGTCCACACCGGCTTGCCGAGTGCCGCCTCGTAGCACGCCACGAACTGAGCCTCGAGGTCCAGGAAGGTGTTCACCACCACGCCGTCGGCGGCGAGCATCGCCTCGATGGCCTCGTCACGGAGCGCTTCATAACCCGGAAAGTTAAAGAAGCCGGGAGCCGTGCCCTTCGTCACCGTCACGCGTACCGGCATTCTAGGCACGACGTAGGTCGTCTCCTGTTCGTCGTCGGCGACGATCTGCTCGTGAAGACCATGCACGACGGCGTTGAGGTCGCAGAGCGAGTAGAAGCACGACGGCCCGTGGAAGAAGAGCCGCGGGATGCCGAGCCTCCAGGCAACTCCGGCGGCCCACGTGTTGCACCAGTCGGAGATGATGCAGCTCGGGCGCCGCTCCAGAGCGCGCACGTAGGCCTCGAAGGGCGCGTCGAGGGCGCGCATGGCGATGAGAAAGGGCGTGAGCTGCGCGTCCTCCGAGAGCTTGTCGGCGTTCTGGCAGTCCGACGGCAGGCCTGCCACGGCCGGCGAGAACGGGAGCTCCACGATCTCGAGGGGCAGCTTCTCGCGCGCGGCCTTGTCAGCGACGCCGCGCAGCCTCGTGGCGTTCAGCGGCGTCGTGACGAGGCTGGCGCGTGCGCCATGCGCGGCGAGGAGGGCCGCGAGATCGACCATGGGGATGACGTGACCGTGCGCCGCGAGAGGGGCGAGGACGAAGTGCGGCTGCGGCGAAGGCGGCTGTGTTGTGGACTCAGCTGTCATCGGTGCTGTCATCAGTGCCTTCTCCGGTCACTGATCATCAGTGCTCTCCCAGACACCGATTTTTATGGGACTTCAGAAAAAGAAGTCAAAGGACGACGTTAGCACATCCATAAATATCTACTACTCCCTCCATCGAAATATAAGAAGTTTTAGGAGTGTTTAGGTGAGAGTTACTAAAAAATAAGTCTTTTTTTAGAGGGACTAAAGACCCAAACACCCTCTTAGAGTTGGATATGATTATTAAAAAAAATAGATAGAAGTGAGTGGTGGATGGTTGTGATTGGATGAGTATTGAGGTAGTAGGAAAAGTGAATGGTGGAGAGTTACGATTTGTTGGGAAGAAAATATTGAT More
CDS seq		ATGACAGCACCGATGACAGCTGAGTCCACAACACAGCCGCCTTCGCCGCAGCCGCACTTCGTCCTCGCCCCTCTCGCGGCGCACGGTCACGTCATCCCCATGGTCGATCTCGCGGCCCTCCTCGCCGCGCATGGCGCACGCGCCAGCCTCGTCACGACGCCGCTGAACGCCACGAGGCTGCGCGGCGTCGCTGACAAGGCCGCGCGCGAGAAGCTGCCCCTCGAGATCGTGGAGCTCCCGTTCTCGCCGGCCGTGGCAGGCCTGCCGTCGGACTGCCAGAACGCCGACAAGCTCTCGGAGGACGCGCAGCTCACGCCCTTTCTCATCGCCATGCGCGCCCTCGACGCGCCCTTCGAGGCCTACGTGCGCGCTCTGGAGCGGCGCCCGAGCTGCATCATCTCCGACTGGTGCAACACGTGGGCCGCCGGAGTTGCCTGGAGGCTCGGCATCCCGCGGCTCTTCTTCCACGGGCCGTCGTGCTTCTACTCGCTCTGCGACCTCAACGCCGTCGTGCATGGTCTTCACGAGCAGATCGTCGCCGACGACGAACAGGAGACGACCTACGTCGTGCCTAGAATGCCGGTACGCGTGACGGTGACGAAGGGCACGGCTCCCGGCTTCTTTAACTTTCCGGGTTATGAAGCGCTCCGTGACGAGGCCATCGAGGCGATGCTCGCCGCCGACGGCGTGGTGGTGAACACCTTCCTGGACCTCGAGGCTCAGTTCGTGGCGTGCTACGAGGCGGCACTCGGCAAGCCGGTGTGGACGCTTGGCCCGCTCTGCTTGCACAACCGGGACGACGAGGCCATGGCTTCGTGTGGGACTGGGAGCACGGACCTGCGCGCGATCACCGCGTGGCTCGACGAGCAGGTCACCGGCTCCGTCGTCTACGTCAGCTTCGGCAGCGTCCTGCGAAAGCTTCCGAAGCACCTGTTCGAGGTCGGCAATGGCCTCGAGGACTCCGGCAAGCCGTTCCTCTGGGTGGTGAAGGAGTCGGAAGCTTCGTCCAGGCCGGAGGTGCAGGAATGGCTGGACGAGTTCATGGCGCGAACCGCGACGCGCGGCCTCGTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCGCGCCGTCGGTGGCTTCCTCACGCACTGCGGGTGGAACTCGCTGCTGGAGGCCATCGCCCGTGGCGTGCCCGTGGCGACGTGGCCACACTTCGCCGACCAGTTCCTGAACGAGCGGCTCGCCGTGGACGTGCTCGGCGTCGGCGTGCCGATCGGCGTGACGGCGCCGGTGAGCATGTTGAACGAGGAGTCCTTGACAGTTGATCGGGGTGACGTCGCGCGGGTGGTGTCGGTGCTGATGGACGGCGGCGGCGAGGAGGCCGAGGAGAGGAGGAGGAAGGCCAAGGAGTACGGTGAGAAAGCTCGAAGGGCCATGGCGAAAGGAGGCTCCTCGTATGAGAATGTTATGCGGCTCATTGCGAGGTTCACGCAAATTGGAGTGGAAGAACACTAG More
Protein seq		MTAPMTAESTTQPPSPQPHFVLAPLAAHGHVIPMVDLAALLAAHGARASLVTTPLNATRLRGVADKAAREKLPLEIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEKARRAMAKGGSSYENVMRLIARFTQIGVEEH
Function		UDP-glycosyltransferase 73C3 [UniProtKB/Swiss-Prot:Q9ZQ96]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0103800	OsZS97_02T0103800.1	Chr02	6043723	6047410	-	makerRMon
CDS seq	ATGACAGCACCGATGACAGCTGAGTCCACAACACAGCCGCCTTCGCCGCAGCCGCACTTCGTCCTCGCCCCTCTCGCGGCGCACGGTCACGTCATCCCCATGGTCGATCTCGCGGCCCTCCTCGCCGCGCATGGCGCACGCGCCAGCCTCGTCACGACGCCGCTGAACGCCACGAGGCTGCGCGGCGTCGCTGACAAGGCCGCGCGCGAGAAGCTGCCCCTCGAGATCGTGGAGCTCCCGTTCTCGCCGGCCGTGGCAGGCCTGCCGTCGGACTGCCAGAACGCCGACAAGCTCTCGGAGGACGCGCAGCTCACGCCCTTTCTCATCGCCATGCGCGCCCTCGACGCGCCCTTCGAGGCCTACGTGCGCGCTCTGGAGCGGCGCCCGAGCTGCATCATCTCCGACTGGTGCAACACGTGGGCCGCCGGAGTTGCCTGGAGGCTCGGCATCCCGCGGCTCTTCTTCCACGGGCCGTCGTGCTTCTACTCGCTCTGCGACCTCAACGCCGTCGTGCATGGTCTTCACGAGCAGATCGTCGCCGACGACGAACAGGAGACGACCTACGTCGTGCCTAGAATGCCGGTACGCGTGACGGTGACGAAGGGCACGGCTCCCGGCTTCTTTAACTTTCCGGGTTATGAAGCGCTCCGTGACGAGGCCATCGAGGCGATGCTCGCCGCCGACGGCGTGGTGGTGAACACCTTCCTGGACCTCGAGGCTCAGTTCGTGGCGTGCTACGAGGCGGCACTCGGCAAGCCGGTGTGGACGCTTGGCCCGCTCTGCTTGCACAACCGGGACGACGAGGCCATGGCTTCGTGTGGGACTGGGAGCACGGACCTGCGCGCGATCACCGCGTGGCTCGACGAGCAGGTCACCGGCTCCGTCGTCTACGTCAGCTTCGGCAGCGTCCTGCGAAAGCTTCCGAAGCACCTGTTCGAGGTCGGCAATGGCCTCGAGGACTCCGGCAAGCCGTTCCTCTGGGTGGTGAAGGAGTCGGAAGCTTCGTCCAGGCCGGAGGTGCAGGAATGGCTGGACGAGTTCATGGCGCGAACCGCGACGCGCGGCCTCGTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCGCGCCGTCGGTGGCTTCCTCACGCACTGCGGGTGGAACTCGCTGCTGGAGGCCATCGCCCGTGGCGTGCCCGTGGCGACGTGGCCACACTTCGCCGACCAGTTCCTGAACGAGCGGCTCGCCGTGGACGTGCTCGGCGTCGGCGTGCCGATCGGCGTGACGGCGCCGGTGAGCATGTTGAACGAGGAGTCCTTGACAGTTGATCGGGGTGACGTCGCGCGGGTGGTGTCGGTGCTGATGGACGGCGGCGGCGAGGAGGCCGAGGAGAGGAGGAGGAAGGCCAAGGAGTACGGTGAGAAAGCTCGAAGGGCCATGGCGAAAGGAGGCTCCTCGTATGAGAATGTTATGCGGCTCATTGCGAGGTTCACGCAAATTGGAGTGGAAGAACACTAG More
Protein seq	MTAPMTAESTTQPPSPQPHFVLAPLAAHGHVIPMVDLAALLAAHGARASLVTTPLNATRLRGVADKAAREKLPLEIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEKARRAMAKGGSSYENVMRLIARFTQIGVEEH More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0103800	OsZS97_02T0103800.2	Chr02	6044516	6047410	-	makerRMon
CDS seq	ATGACAGCACCGATGACAGCTGAGTCCACAACACAGCCGCCTTCGCCGCAGCCGCACTTCGTCCTCGCCCCTCTCGCGGCGCACGGTCACGTCATCCCCATGGTCGATCTCGCGGCCCTCCTCGCCGCGCATGGCGCACGCGCCAGCCTCGTCACGACGCCGCTGAACGCCACGAGGCTGCGCGGCGTCGCTGACAAGGCCGCGCGCGAGAAGCTGCCCCTCGAGATCGTGGAGCTCCCGTTCTCGCCGGCCGTGGCAGGCCTGCCGTCGGACTGCCAGAACGCCGACAAGCTCTCGGAGGACGCGCAGCTCACGCCCTTTCTCATCGCCATGCGCGCCCTCGACGCGCCCTTCGAGGCCTACGTGCGCGCTCTGGAGCGGCGCCCGAGCTGCATCATCTCCGACTGGTGCAACACGTGGGCCGCCGGAGTTGCCTGGAGGCTCGGCATCCCGCGGCTCTTCTTCCACGGGCCGTCGTGCTTCTACTCGCTCTGCGACCTCAACGCCGTCGTGCATGGTCTTCACGAGCAGATCGTCGCCGACGACGAACAGGAGACGACCTACGTCGTGCCTAGAATGCCGGTACGCGTGACGGTGACGAAGGGCACGGCTCCCGGCTTCTTTAACTTTCCGGGTTATGAAGCGCTCCGTGACGAGGCCATCGAGGCGATGCTCGCCGCCGACGGCGTGGTGGTGAACACCTTCCTGGACCTCGAGGCTCAGTTCGTGGCGTGCTACGAGGCGGCACTCGGCAAGCCGGTGTGGACGCTTGGCCCGCTCTGCTTGCACAACCGGGACGACGAGGCCATGGCTTCGTGTGGGACTGGGAGCACGGACCTGCGCGCGATCACCGCGTGGCTCGACGAGCAGGTCACCGGCTCCGTCGTCTACGTCAGCTTCGGCAGCGTCCTGCGAAAGCTTCCGAAGCACCTGTTCGAGGTCGGCAATGGCCTCGAGGACTCCGGCAAGCCGTTCCTCTGGGTGGTGAAGGAGTCGGAAGCTTCGTCCAGGCCGGAGGTGCAGGAATGGCTGGACGAGTTCATGGCGCGAACCGCGACGCGCGGCCTCGTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCGCGCCGTCGGTGGCTTCCTCACGCACTGCGGGTGGAACTCGCTGCTGGAGGCCATCGCCCGTGGCGTGCCCGTGGCGACGTGGCCACACTTCGCCGACCAGTTCCTGAACGAGCGGCTCGCCGTGGACGTGCTCGGCGTCGGCGTGCCGATCGGCGTGACGGCGCCGGTGAGCATGTTGAACGAGGAGTCCTTGACAGTTGATCGGGGTGACGTCGCGCGGGTGGTGTCGGTGCTGATGGACGGCGGCGGCGAGGAGGCCGAGGAGAGGAGGAGGAAGGCCAAGGAGTACGGTGAGAAAGCTCGAAGGGCCATGGCGAAAGGAGGCTCCTCGTATGAGAATGTTATGCGGCTCATTGCGAGGTTCACGCAAATTGGAGTGGAAGAACACTAG More
Protein seq	MTAPMTAESTTQPPSPQPHFVLAPLAAHGHVIPMVDLAALLAAHGARASLVTTPLNATRLRGVADKAAREKLPLEIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEKARRAMAKGGSSYENVMRLIARFTQIGVEEH More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0103800	OsZS97_02T0103800.3	Chr02	6043723	6047410	-	makerRMon
CDS seq	ATGACAGCACCGATGACAGCTGAGTCCACAACACAGCCGCCTTCGCCGCAGCCGCACTTCGTCCTCGCCCCTCTCGCGGCGCACGGTCACGTCATCCCCATGGTCGATCTCGCGGCCCTCCTCGCCGCGCATGGCGCACGCGCCAGCCTCGTCACGACGCCGCTGAACGCCACGAGGCTGCGCGGCGTCGCTGACAAGGCCGCGCGCGAGAAGCTGCCCCTCGAGATCGTGGAGCTCCCGTTCTCGCCGGCCGTGGCAGGCCTGCCGTCGGACTGCCAGAACGCCGACAAGCTCTCGGAGGACGCGCAGCTCACGCCCTTTCTCATCGCCATGCGCGCCCTCGACGCGCCCTTCGAGGCCTACGTGCGCGCTCTGGAGCGGCGCCCGAGCTGCATCATCTCCGACTGGTGCAACACGTGGGCCGCCGGAGTTGCCTGGAGGCTCGGCATCCCGCGGCTCTTCTTCCACGGGCCGTCGTGCTTCTACTCGCTCTGCGACCTCAACGCCGTCGTGCATGGTCTTCACGAGCAGATCGTCGCCGACGACGAACAGGAGACGACCTACGTCGTGCCTAGAATGCCGGTACGCGTGACGGTGACGAAGGGCACGGCTCCCGGCTTCTTTAACTTTCCGGGTTATGAAGCGCTCCGTGACGAGGCCATCGAGGCGATGCTCGCCGCCGACGGCGTGGTGGTGAACACCTTCCTGGACCTCGAGGCTCAGTTCGTGGCGTGCTACGAGGCGGCACTCGGCAAGCCGGTGTGGACGCTTGGCCCGCTCTGCTTGCACAACCGGGACGACGAGGCCATGGCTTCGTGTGGGACTGGGAGCACGGACCTGCGCGCGATCACCGCGTGGCTCGACGAGCAGGTCACCGGCTCCGTCGTCTACGTCAGCTTCGGCAGCGTCCTGCGAAAGCTTCCGAAGCACCTGTTCGAGGTCGGCAATGGCCTCGAGGACTCCGGCAAGCCGTTCCTCTGGGTGGTGAAGGAGTCGGAAGCTTCGTCCAGGCCGGAGGTGCAGGAATGGCTGGACGAGTTCATGGCGCGAACCGCGACGCGCGGCCTCGTGGTGCGCGGGTGGGCGCCGCAGGTGACCATCCTGTCGCACCGCGCCGTCGGTGGCTTCCTCACGCACTGCGGGTGGAACTCGCTGCTGGAGGCCATCGCCCGTGGCGTGCCCGTGGCGACGTGGCCACACTTCGCCGACCAGTTCCTGAACGAGCGGCTCGCCGTGGACGTGCTCGGCGTCGGCGTGCCGATCGGCGTGACGGCGCCGGTGAGCATGTTGAACGAGGAGTCCTTGACAGTTGATCGGGGTGACGTCGCGCGGGTGGTGTCGGTGCTGATGGACGGCGGCGGCGAGGAGGCCGAGGAGAGGAGGAGGAAGGCCAAGGAGTACGGTGAGAAAGCTCGAAGGGCCATGGCGAAAGGAGGCTCCTCGTATGAGAATGTTATGCGGCTCATTGCGAGGTTCACGCAAATTGGAGTGGAAGAACACTAG More
Protein seq	MTAPMTAESTTQPPSPQPHFVLAPLAAHGHVIPMVDLAALLAAHGARASLVTTPLNATRLRGVADKAAREKLPLEIVELPFSPAVAGLPSDCQNADKLSEDAQLTPFLIAMRALDAPFEAYVRALERRPSCIISDWCNTWAAGVAWRLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQIVADDEQETTYVVPRMPVRVTVTKGTAPGFFNFPGYEALRDEAIEAMLAADGVVVNTFLDLEAQFVACYEAALGKPVWTLGPLCLHNRDDEAMASCGTGSTDLRAITAWLDEQVTGSVVYVSFGSVLRKLPKHLFEVGNGLEDSGKPFLWVVKESEASSRPEVQEWLDEFMARTATRGLVVRGWAPQVTILSHRAVGGFLTHCGWNSLLEAIARGVPVATWPHFADQFLNERLAVDVLGVGVPIGVTAPVSMLNEESLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEKARRAMAKGGSSYENVMRLIARFTQIGVEEH More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	6.6460495	4.4753855	0.014996

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0206400	RBH	1.210162	2.055658	0.726303
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g11130	RBH	0.815880	0.742404	0.186394
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0206400	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0008130	RBH	0.462661	0.0	0.182864
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0008240	RBH	0.117144	0.0	0.0
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0008030	RBH	0.0	0.0	0.0
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0007980	RBH	0.214089	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0008040	RBH	21.144753	0.0	2.639071
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0100100	RBH	12.204518	4.837131	0.349339
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0007970	RBH	0.685973	0.098889	1.358121
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_02G0103500	RBH	3.9729895	0.2453455	0.0063505
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0008400	RBH	1.275004	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0008010	RBH	2.590594	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0008290	RBH	13.118425	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0008280	RBH	1.609857	0.355582	0.336076
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0008040	RBH	0.689381	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G008150	RBH	1.309366	0.0	1.285829
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0008160	RBH	2.523702	2.288974	8.975902

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.