Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0008000 | OGI:02017570 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:5854452-5855409 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGATCCAAAAGGTCCCCAAGTACTTGTTCGAGGTCGGCCATGGCCTGGAGGACTCCGGCAAGCCGTTCATCTGGGTGGTGAAGGTGTCGGAGGTGGCCACGCCGGAGGTGCAAGAATGGCTGTCCGCGCTGGAGGCGCGCGTGGCGGGGCGCGGCGTCGTGGTCCGCGGGTGGGCGCCGCAGCTCGCCATCCTGTCGCACCGCGCCGTCGGTGGCTTCGTCACCCATTGTGGCTGTAACTCGATTCTGGAGGACATCACCCATGGCGTGCCGGTCGTAACGTGGCCGCACATCTCCGACCAGTTCCTAAACGAGCGGCTCGCCGTCGACGTGCTCGGCGTCGGCGTGCCGGTCGGCGCCACGGCGTCCATGATGCTGTACTATATTTCCAATTATTACTATTATATTGTGGTTGTATATTGGACATTGTTTGTTTCTTTAACTTCGACGGATGTGAATTTCATAAATTTTGAGTGGCTTATTCTTATTTCCAACAATTTTGCTAGTTAACTAATTAATTAGTGATATATGCCACATAATTTTTAATTTTTAAAATAGCTTAAATTTCTGGGTTGTTTCAAGTTACAAGTAGCACTATAGGATTTTACTTATTTTGGGACAAAATTTAGATCGAGAACTGCACTTATTTTACGACTGATATATCATAAGACATAAAATCGATCTTGAATATCACAATTTAACCATTTATTTATTTTATAAATTATTATCAACAACAACAAACTTTAGATCATATGAAACTCAATAGTTGTTTTTGCTACCAAACCGCTATAGGAAGCACGACTGCCTGTGGTAACTGCTGTTAAGATAAACCCTTATCTCTACCGGTACTTGGGAAGTACGACTGGCCGGTACTTGGGAAGTACGACTGCATGTGGTAACTGCTATTAAGATAAACCCTTATCTCTACCGGTATTAGTAGTATTCTAGGTACTGGTAG
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| CDS seq | ATGATCCAAAAGGTCCCCAAGTACTTGTTCGAGGTCGGCCATGGCCTGGAGGACTCCGGCAAGCCGTTCATCTGGGTGGTGAAGGTGTCGGAGGTGGCCACGCCGGAGGTGCAAGAATGGCTGTCCGCGCTGGAGGCGCGCGTGGCGGGGCGCGGCGTCGTGGTCCGCGGGTGGGCGCCGCAGCTCGCCATCCTGTCGCACCGCGCCGTCGGTGGCTTCGTCACCCATTGTGGCTGTAACTCGATTCTGGAGGACATCACCCATGGCGTGCCGGTCGTAACGTGGCCGCACATCTCCGACCAGTTCCTAAACGAGCGGCTCGCCGTCGACGTGCTCGGCGTCGGCGTGCCGGTCGGCGCCACGGCGTCCATGATGCTGTACTGGTAG |
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| Protein seq | MIQKVPKYLFEVGHGLEDSGKPFIWVVKVSEVATPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGCNSILEDITHGVPVVTWPHISDQFLNERLAVDVLGVGVPVGATASMMLYW |
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| Function | UDP-glycosyltransferase 73D1 [UniProtKB/Swiss-Prot:Q9SCP6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0008000 | OsARC_02g0008000.01 | Chr02 | 5854452 | 5855409 | + | NAM | ||
| CDS seq | ATGATCCAAAAGGTCCCCAAGTACTTGTTCGAGGTCGGCCATGGCCTGGAGGACTCCGGCAAGCCGTTCATCTGGGTGGTGAAGGTGTCGGAGGTGGCCACGCCGGAGGTGCAAGAATGGCTGTCCGCGCTGGAGGCGCGCGTGGCGGGGCGCGGCGTCGTGGTCCGCGGGTGGGCGCCGCAGCTCGCCATCCTGTCGCACCGCGCCGTCGGTGGCTTCGTCACCCATTGTGGCTGTAACTCGATTCTGGAGGACATCACCCATGGCGTGCCGGTCGTAACGTGGCCGCACATCTCCGACCAGTTCCTAAACGAGCGGCTCGCCGTCGACGTGCTCGGCGTCGGCGTGCCGGTCGGCGCCACGGCGTCCATGATGCTGTACTGGTAG
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| Protein seq | MIQKVPKYLFEVGHGLEDSGKPFIWVVKVSEVATPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGCNSILEDITHGVPVVTWPHISDQFLNERLAVDVLGVGVPVGATASMMLYW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0207400 | SBH | 0.0 | 0.0 | 0.092946 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11670 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0207400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008150 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008260 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008050 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0020910 | SBH | 0.142520 | 0.086855 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008060 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007990 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0104100 | RBH | 0 | 0 | 0.100756 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008400 | RBH | 1.275004 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008030 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008310 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008310 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008170 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008160 | RBH | 2.523702 | 2.288974 | 8.975902 |
