Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0004460 | OGI:02009420 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:3134237-3143104 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgggaaatttgctgctgcttctgctgcatggaaactgggaaggtctcatggtggatttttttttcttctcagaatgggtacagtttggatagatcactatgcagtagtattatattgagtaaagatactttagaggtgaataatagccacagcctgcaatgcccatttgctaccgatggttagtttcagaagaactttgctaccgatggtccttgttcattgattgcgcagaaagtaataccgatgactatgttaccccgtgcctgtccaattgttgcattggttcagacaactgtgacgaccgctgtttcaagcttgacaattgacaaaactatgaaaaatcctggtcgcctcctgctgtcatctttgcctgtcttcagccgccaacactgcagcaatatcagctaagttcttctctttgtttgtttccattttttcccctcgctttgattgatggtgtaaaattgaaggtgctagcaacaaattttggtacctcacaccccatcagcaactaagttgcttgaccatttctttgttgctgctgctctttgctcgaccttcctggccaaagaaaagctattttcttttgcaaccattcttagttaaatccttgtcacattgacatttttacatcatcctgatgacttctcttggctcttgcagcttcagatgatagacgtgcttgcttgccaccaaaaaggagaaatgcaagcatatgtttcatgaaacagcctgagctcaattgaccaaaggctgaagcaacatgctaggggaaaaaaacagttgttatgttttttatccattcagttaaaacttataagtagtaagcacaagagaggcagcaaggccagcaaaattcagatgactactcagatgcagcatgaaagtggagtacatatcctgacctggaacatatggacaggatatcaggatcttaaactgccttcatgatccagtccattttgactgtgcgcaagagccctttcttggctagctgcttctcccaattgatttttgagtgtcccaacatgcactgttttacaacgatctacgttgagcaatgaatgttttacaaataagttcacatcggaatatactttgttcctattattattgcttattactctctttgttttatattagagtaaatttcatcttgaaccacctatattgaccaatgtggcataatgggctagggctaagtttctcttttcacttaacaccacctaattttacaatctttttcaagttggaccaagtttacggcatgggctgcgtttcggcctaatccacgcgagcagttggtgtttgctcatggtggcagtggtgcgcgataccaggagcgtgcgcgacgcgttggtgtggtcatcggcgagggcgagcatgtcgtcgtccaatggacacggactctgtggtgataacgctcggccctgtcgcgctcaaaacaatactacggcacatctgattacgttgacaggatctgagaccataccagaactatcccattcagatcatgcatgtgaaacaaaaaaaagaccaactattctatttagcagtaatcaagatccgatcttctctttaattttcttgtgaaaattcgacatgtttccggttaccaaccgaggaacacggattaattactctagttttttcgaagagcagcagaggaatattgattacccccacaaaacccaaatctcataggaattactgaatgcattgctttgtttcactctcccaagccccagggtcaaaactttcctccatggattgctccatgatcgaatcgcagatgcatatacctgtctacctcataaacccaacaagcatcctagcaacgaggcagccaacgaccccagtgattccatcctcgggaagccatcgatcgaggtggcatgggcgtccaccaggcagaggcccttcggcctgacgctggcgacacggttggatgacgagacttgctccaccttggcgccggtggacggtggacacggtggcgtttgtgtttcgattgttgagttcacgccgctgcacagcagccgtgtgtgaacagagacttttttgggttgggagggaagtactcgtaccagagagggaggcagaaccgccgtcgagggagccctcgccggagccccgagacggagactgccgaccgctggtaaacgcacctatttgcgtgggccgaagcccagcctagtgggccaatcagtaaacctggttcaacttgcaaaggatggtaaaaataggtggtgtaaagtaaaaaaagtgacccacccctagcccaatgtgcaacttaggtcaatataagtggtctaaagtgaaatttactctttatattatataagacactttgacttttttttcttaaactatttaaaatttgactaaatttatagaaacacaacaacatttttaacaccaaacaaatatggtataaaaatataccaaaaactaattggtgttataagagtagttatatttatatacctctataattttgatttagaaaaaaaataaaatgcttataatatgaagagggtgtagtgcttaggttccagaatccagctaggaactggagcaggtaccgaggcatcagcacaagaaatatggatagtttgtggctgctggactgctggtgctggatgaataattatttttcccctggaaaaggacattggtttggtcacatccatgtgatttttttttcaaaattgtactttactgcgtttaattttttttgggcgaaaactaacacggttgatatggattgtttttttttctctcttcaaaacagtactttattgcgcttgatttttttttggcaaaaactaacacggttaatatgatatggagtgcttgcggtggaatggaatgaccatggcgccacgctgggtgcagttgccatatttgtttgtagcggcttaaaagttaacgctaaaaaaactacattaaaaatatattaaaatgctttgcaaaaaaaagattaaaattaagtttaaaattcaaatataagattttgctttaacttattaggccaatgaggtgcgggctcaccggccgccggcgaagacaagagagtgctccacgagttcacggtaggacgatttacgtgcggcccatttttgttgggccgtaactggattgtaactagaatgcggcccataatagttggtccaggacgggatttcgattacgtgaggcccaaatatgggattagttgagtagggcaagggcccaagacttggcccaattgccacaggcaccgtctcgtcgtctccgtggcgacagcgccgccgctgctctgtcgccggcggcctgcgcaaccgccgcctcttcggctcgccggcggcgcgcggggactcgaggaaggcctctgcgtcgccgtcactactacccatagctcgagtatgcaacgcgtggccatctccatctgctctctattactactattttcttagcgtgaatctgaaaattgaagcgatatagttgcagacgatggggattctcaaactatacatactagttctgatagagacaaatttgcacatgattttcacgaatttgagtagtgaccatcattcagaatgctcaatctgcacacctgagttgtggcagctagattcttgtcttcaactctgttcatagagttggtaaattaatatgccttgaagagatcttagcctttttagtaccatctgatctaatagcacaccataagcaaagaacaggccaaatgtgatgccaaagataaccttgtcaccgaattgatctgtggatgaagtagggctaggaagtgctcttgctgaattacagtggtgactgagcataccaccacatagctttggattaccagtgaagcttgagttgtcaaatgtatcaaactggcctccagttggaatagccccttccaggtcgttgttggaaacattgaatgcagaaaggaaggaagtttagcttgttcagttctaaagggattgtgcctgttagattgttgttagacaagtctagcatgaccagcttggtgaggttgcagattgcttgtgggatctccccagagaagctattgaagctcaagttgagcatatcgagtgccttcagctgactaatctctggcgggatcgcacctgtaaaaccatttttggctatgtttattgttgtgtggatatattggtattgtcggtttttgatgaatggaatgccgtaaaatctcatgtttgggacacttacatccagattggttctcttgtctgacttcagcattggaatctgcgttaatattgttggaaattcacctgtaaggttgttattggatatgtctagatagaagaggaagttgaggctgttgatccaggcaggcactgatccgcttaattgattattggataactgcagcaccttcaattttgtgagctttgatagccaaagagaaatttttccatgtaaagaagaaccacttatttctaggtactgaagattttcaaaaccatccattgtttcatctgctagcaatgtctcatggttgaagttccctccaagaagtagagtttttaagttgctaaagctcttgaggatgtaaagtgccttcgtgatattcgtaaaatcattccaaccaactgacaggaaggaaagagacctcagtctgtccattctgtgtgagaactcaccatggaatttgttccacgaaagtctcagtgcaatcaaatttgtgcaatcataaatgctttctggaattgtaccattgaagttgttcacgagaagatcaattatcattagattagataggctggaaaagttgatcttgccaaggtctccactgaggtagttgatcttgaggtcgaggattttgagatttgtgcagttgcctaaagttgatggcagctccccatacaagtagttctcacccaaatggagctccttcaatctcttgagctgacctatggacttgggtatgtttccactgaatatattctgttggagatcaaggatagacaatttgctgagctttataatgttggcatcatcaagtactccatttagatcattgtttgggaaagaaaggtgctccaatgatgaagcattgaatagttcatctgggagtggacccttgaagttgttgcggccacccttgagcactctaagcatggagcagttgcctatgtctgagggtatgctgccaccaaattgattggaagagaggtcaagtaccccgaaggatggtgagttgatgcacaaagaacttggtatctgtcctataaagctgttgttgctggcattaagagccaccagattgttcatcaccttacatgtggttgttggaaatttccctgtaaataagttgcttgagatgttcagtacctgaagaggccagatagttgattgaatgaagagctcttgcaaagctccactgaagtgattgaagctaacatcaagaacgacgatgctgctcgatgacaccaacccctccaatggaagttcaccagacagcgaattgtgtgaaagattgagctgcagcaggccggtgaggctgccaagagacggtgagatctgcccttcaagggccttagaagcgagcaaaatatcagcgatcctcatgtctgcattacaggtgatgccttcccatgtgcagcaatttgtgccgttccgccatgatgcggagaggccaccgtctcctgagaggccagcaaggaactggaggaggacactcttctcctggtctatgcaggagtcggtggaagaagctaaacacagcaccgtcagcagagcaaacccaagtaaatctgtgggtaatttgctgctgcttctgctgcatggaaagtggaaaggcctcatggtgggttttctttttcagattgagtatgagttggatatttactgttcattactcttatattgagtaggaatgaaagcaggaacaaatttcatctttgttgattgcagttgctagctgatcgagtggctagtcaatggtcatcacaaagaataagtggtcaaggtcatcaggaattcaggatcaaaagatgaattgagagttgaatgagagtgacaacctgcagtgcttgcttgctaccgatagtacagtcattgattgggcaggcagtaacatcatgaattgtgtcgatcacaactttattcagcagtgaaggaaatatcctggaacatatggtgtagtaagtggtaagttagtagaccaagtcttccctttccggttgatcatcagctgttgcatttcgaaagtttgattccctacctatagctccacatttgccggctgtttaccgttcctttttttgccataattttgagtttttgacaacaatcaaaccactagcttcacacgaaatgttgtaaaatctgtagcaaatatggtaggctctacgtatatacatgcatgtttcatacttgaataataacgtaggagatacatttcatcaaataaaagaagtatgcttaatatttcattggggctcatcagagaagcttagttctgcagtgctcagccctggttgatgctggagctggaggccaggacacaggtccagcgcccgtgatcctgccttgcagagcccttggaaaattgcaggtgaaactagcatgcatgcaggtatgaggtaaccaggcttgctaagatttgctcaaatctgttgcagatatagtaggcactataatcccataaatatcaagtctctcgaaataaaatgatgatttttttaaggattttgtctttgttttcttgtacaatgcaaatcgtggcaagtactgtttatttcttcttgtgtactcatatatcgatgttgttattcagcgatcaaagtgaatgatgacaataaagttacacggaattctgcaagaatgaatttttgatacatttagactgcttcgattcacatcatcttacatagctgtgtacttatacattaccagaattcctggatcactcttcacccatgtattccttccagtttattatcaaaaaaacgagttccctccaatgtccttttctttatttttgtattttccgcctttcataggaaaacctgaaccagaacaagaggtatatttcgtgcacaactagactaagcttgtaaccggacatgctgcttggatcttaacagcagctcaaactgaccaaagttatcacaaaaagtacatcagatctgcaataggactagccaaaaaaaaccttgataatactatttgatcatatagcacacctacacagaagaatgcgacaaaagcaatcgcaaagatggtcttttgagtgctttgttctctggagtctgaaaactggaggtgtttttgccgatgcacaggtgcaaatgagcgtatgaccacacagctttgggttcccatcaaaaccccaatactcatatccaattggaactgacccctctaagtcgttgttagaaacatcaaatattgaaagtgagtgcacattgttcagtcctggtgggattgaacctgtgagatggaggttagacaattctaacacttgcagatttgtcaggttgaaaagtttcggtggaatatgccctgaagagctgttgaagctcaagatgagcactgtgagtgatttcagctggccgacctctgaaggaattgcaccagtaagcttattgtttccaagatttagcattgcagggagagcattggtcataccatatgtaagtgatggctcttcataatcagcataaacaggaagttcaaatacccttggatccaaatgattgtagcattggcatctccattattgctactgggagatcccttctaagattgttgtttgatatatctatgaagtagaggaagttcaggccatggatccagtctgatattggtccagtgagttaattgtaggatagatccaaaacttccattttgagcagttttgaaagccaacgaggtattttttccagacaacgagcaagaaggtaccgaaagaacctgaagactctgaaaaccatcaactattggtatgccatctggcatggccttgcccttgaagttgattcccataatcaaagtgttgactttttgcagttcttgagtgcatgaattgcatttgagatattcccaaaaacattgttgtcaagtgataggaacaagaggtacttcaggttctgccagtttcatttggaaggaagctggaattttttttcccaatgtaatgagtagagggtatagtctgcccagtttcagggtttctccccctccagtcggaggctgtgcctcggaccatgctcgacatgcttttgtcgatgtaactatacttttgtactttgttttttttttactaattcttaatgaaattggttggccactctttggctgacccggcaaaaacgagggacttcaggttgtctattcttggtgacaactggccatagaatttgtttgaagatagctgtaatgtggttagattgctgcatctgtagatgctatctagaatttctccagtgaacttgttcgacataagatccaaaagtttcagattgggcagtctggagaagttaaccttcgaaagctctcctgtgaagttgttgtgcttgaggttgatgatcttgagacttgtaaagttgcttagagatgatggaaacactctggacatcctgttgttatccaactggagctcctccaatctattaagctgacctatggaacccggaatatcaccgatgaagttgttatgcttgatgccgatgattttgagactagtgcagttgcctagagctgatggcaactccccagacatgctgagtttagtccaaatggagctcctccaatctcttaatctgacctatggaacccggaatatctccgatgaagttatgcttgatgctgatggttttgagactagtacagttacctag
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| CDS seq | atgggaaatttgctgctgcttctgctgcatggaaactgggaaggtctcatgcatcctagcaacgaggcagccaacgaccccagtgattccatcctcgggaagccatcgatcgaggtggcatgggcgtccaccaggcagaggcccttcggcctgacgctggcgacacggttggatgacgagacttgctccaccttggcgccggtggacggtggacacggtggcgtttgtgtttcgattgttgagttcacgccgctgcacagcagccgtggcaagggcccaagacttggcccaattgccacaggcaccgtctcgtcgtctccgtggcgacagcgccgccgctgctctgtcgccggcggcctgcgcaaccgccgcctcttcggctcgccggcggcgcgcggggactcgaggaaggcctctgcgtcgccgtcactactacccatagctcgatgctcagccctggttgatgctggagctggaggccaggacacaggtccagcgcccgtgatcctgccttgcagagcccttggaaaattgcagcgatcaaagttgaaaagtttcggtggaatatgccctgaagagctgttgaagctcaagatgagcactgtgagtgatttcagctggccgacctctgaaggaattgcaccagtaagcttattgtttccaagatttagcattgcagggagagcattggtcataccatatttgcctagagctgatggcaactccccagacatgctgagtttagtccaaatggagctcctccaatctcttaatctgacctatggaacccggaatatctccgatgaagttatgcttgatgctgatggttttgagactagtacagttacctag
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| Protein seq | MGNLLLLLLHGNWEGLMHPSNEAANDPSDSILGKPSIEVAWASTRQRPFGLTLATRLDDETCSTLAPVDGGHGGVCVSIVEFTPLHSSRGKGPRLGPIATGTVSSSPWRQRRRCSVAGGLRNRRLFGSPAARGDSRKASASPSLLPIARCSALVDAGAGGQDTGPAPVILPCRALGKLQRSKLKSFGGICPEELLKLKMSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYLPRADGNSPDMLSLVQMELLQSLNLTYGTRNISDEVMLDADGFETSTVT |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0004460 | OsLima_02g0004460.01 | Chr02 | 3134237 | 3143104 | + | NAM | ||
| CDS seq | atgggaaatttgctgctgcttctgctgcatggaaactgggaaggtctcatgcatcctagcaacgaggcagccaacgaccccagtgattccatcctcgggaagccatcgatcgaggtggcatgggcgtccaccaggcagaggcccttcggcctgacgctggcgacacggttggatgacgagacttgctccaccttggcgccggtggacggtggacacggtggcgtttgtgtttcgattgttgagttcacgccgctgcacagcagccgtggcaagggcccaagacttggcccaattgccacaggcaccgtctcgtcgtctccgtggcgacagcgccgccgctgctctgtcgccggcggcctgcgcaaccgccgcctcttcggctcgccggcggcgcgcggggactcgaggaaggcctctgcgtcgccgtcactactacccatagctcgatgctcagccctggttgatgctggagctggaggccaggacacaggtccagcgcccgtgatcctgccttgcagagcccttggaaaattgcagcgatcaaagttgaaaagtttcggtggaatatgccctgaagagctgttgaagctcaagatgagcactgtgagtgatttcagctggccgacctctgaaggaattgcaccagtaagcttattgtttccaagatttagcattgcagggagagcattggtcataccatatttgcctagagctgatggcaactccccagacatgctgagtttagtccaaatggagctcctccaatctcttaatctgacctatggaacccggaatatctccgatgaagttatgcttgatgctgatggttttgagactagtacagttacctag
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| Protein seq | MGNLLLLLLHGNWEGLMHPSNEAANDPSDSILGKPSIEVAWASTRQRPFGLTLATRLDDETCSTLAPVDGGHGGVCVSIVEFTPLHSSRGKGPRLGPIATGTVSSSPWRQRRRCSVAGGLRNRRLFGSPAARGDSRKASASPSLLPIARCSALVDAGAGGQDTGPAPVILPCRALGKLQRSKLKSFGGICPEELLKLKMSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYLPRADGNSPDMLSLVQMELLQSLNLTYGTRNISDEVMLDADGFETSTVT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0004460 | OsLima_02g0004460.03 | Chr02 | 3137486 | 3143104 | + | NAM | ||
| CDS seq | atgctgctcgatgacaccaacccctccaatggaagttcaccagacagcgaattgtgtgaaagattgagctgcagcaggccggtgaggctgccaagagacggtgagatctgcccttcaagggccttagaagcgagcaaaatatcagcgatcctcatgtctgcattacaggtgatgccttcccatgtgcagcaatttgtgccgttccgccatgatgcggagaggccaccgtctcctgagaggccagcaaggaactggaggaggacactcttctcctggtctatgcaggagtcggtggaagaagctaaacacagcaccgtcagcagagcaaacccaagtaaatctgtgggtaatttgctgctgcttctgctgcatggaaagtggaaaggcctcatgccctggttgatgctggagctggaggccaggacacaggtccagcgcccgttgaaaagtttcggtggaatatgccctgaagagctgttgaagctcaagatgagcactgtgagtgatttcagctggccgacctctgaaggaattgcaccagtaagcttattgtttccaagatttagcattgcagggagagcattggtcataccatatttgcctagagctgatggcaactccccagacatgctgagtttagtccaaatggagctcctccaatctcttaatctgacctatggaacccggaatatctccgatgaagttatgcttgatgctgatggttttgagactagtacagttacctag
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| Protein seq | MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLLLLHGKWKGLMPWLMLELEARTQVQRPLKSFGGICPEELLKLKMSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYLPRADGNSPDMLSLVQMELLQSLNLTYGTRNISDEVMLDADGFETSTVT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0004460 | OsLima_02g0004460.05 | Chr02 | 3139143 | 3139596 | + | NAM | ||
| CDS seq | atggagctccttcaatctcttgagctgacctatggacttgggtatgtttccactgaatatattctgttggagatcaaggatagacaatttgctgagctttataatgttggcatcatcaaatcattgtttgggaaagaaaggtgctccaatgatgaagcattgaatagttcatctgggagtggacccttgaagttgttgcggccacccttgagcactctaagcatggagcagttgcctatgtctgaggagaggtcaagtaccccgaaggatggtgagttgatgcacaaagaacttggtatctgtcctataaagctgttgttgctggcattaagagccaccagattgttcatcaccttacatgtggttgttggaaatttccctgtaaataagttgcttgagatgttcagtacctga
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| Protein seq | MELLQSLELTYGLGYVSTEYILLEIKDRQFAELYNVGIIKSLFGKERCSNDEALNSSSGSGPLKLLRPPLSTLSMEQLPMSEERSSTPKDGELMHKELGICPIKLLLLALRATRLFITLHVVVGNFPVNKLLEMFST |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0004460 | OsLima_02g0004460.02 | Chr02 | 3134237 | 3141082 | + | NAM | ||
| CDS seq | atgggaaatttgctgctgcttctgctgcatggaaactgggaaggtctcatgcatcctagcaacgaggcagccaacgaccccagtgattccatcctcgggaagccatcgatcgaggtggcatgggcgtccaccaggcagaggcccttcggcctgacgctggcgacacggttggatgacgagacttgctccaccttggcgccggtggacggtggacacggtggcgtttgtgtttcgattgttgagttcacgccgctgcacagcagccgtggcaagggcccaagacttggcccaattgccacaggcaccgtctcgtcgtctccgtggcgacagcgccgccgctgctctgtcgccggcggcctgcgcaaccgccgcctcttcggctcgccggcggcgcgcggggactcgaggaaggcctctgcgtcgccgtcactactacccatagctcgatgctcagccctggttgatgctggagctggaggccaggacacaggtccagcgcccgtgatcctgccttgcagagcccttggaaaattgcaggtgaaactagcatgcatgcaggtatga
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| Protein seq | MGNLLLLLLHGNWEGLMHPSNEAANDPSDSILGKPSIEVAWASTRQRPFGLTLATRLDDETCSTLAPVDGGHGGVCVSIVEFTPLHSSRGKGPRLGPIATGTVSSSPWRQRRRCSVAGGLRNRRLFGSPAARGDSRKASASPSLLPIARCSALVDAGAGGQDTGPAPVILPCRALGKLQVKLACMQV |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0004460 | OsLima_02g0004460.04 | Chr02 | 3137486 | 3143104 | + | NAM | ||
| CDS seq | atgctgctcgatgacaccaacccctccaatggaagttcaccagacagcgaattgtgtgaaagattgagctgcagcaggccggtgaggctgccaagagacggtgagatctgcccttcaagggccttagaagcgagcaaaatatcagcgatcctcatgtctgcattacaggtgatgccttcccatgtgcagcaatttgtgccgttccgccatgatgcggagaggccaccgtctcctgagaggccagcaaggaactggaggaggacactcttctcctggtctatgcaggagtcggtggaagaagctaaacacagcaccgtcagcagagcaaacccaagtaaatctgtgggtaatttgctgctgcttctgctgcatggaaagtggaaaggcctcatgtgctcagccctggttgatgctggagctggaggccaggacacaggtccagcgcccgtgatcctgccttgcagagcccttggaaaattgcagcgatcaaagttgaaaagtttcggtggaatatgccctgaagagctgttgaagctcaagatgagcactgtgagtgatttcagctggccgacctctgaaggaattgcaccagtaagcttattgtttccaagatttagcattgcagggagagcattggtcataccatatttgcctagagctgatggcaactccccagacatgctgagtttagtccaaatggagctcctccaatctcttaatctgacctatggaacccggaatatctccgatgaagttatgcttgatgctgatggttttgagactagtacagttacctag
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| Protein seq | MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLLLLHGKWKGLMCSALVDAGAGGQDTGPAPVILPCRALGKLQRSKLKSFGGICPEELLKLKMSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYLPRADGNSPDMLSLVQMELLQSLNLTYGTRNISDEVMLDADGFETSTVT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 3140067 | 3140735 | + | OsLima_02g0004460.04 | OsLima_02g0004460.03,OsLima_02g0004460.04 | All |
| A5 | Chr02 | 3137642 | 3140728 | + | OsLima_02g0004460.04 | OsLima_02g0004460.04,OsLima_02g0004460.02,OsLima_02g0004460.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.150397 | 0.020339 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0153450 | SBH | 0.067110 | 0.0 | 0.346779 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0153450 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004370 | SBH | 0.206708 | 0.439847 | 0.211199 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004570 | RBH | 0.096933 | 0.000000 | 0.403800 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004400 | SBH | 0.061376 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004300 | SBH | 0.046390 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004340 | SBH | 1.665661 | 0.000000 | 0.055152 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0053000 | SBH | 1.2185155 | 0.6556885 | 0.2696535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004330 | SBH | 0.009666 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0055400 | SBH | 0.7668005 | 0.463171 | 2.2909955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004600 | RBH | 0.162084 | 0.020367 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004270 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004600 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004530 | SBH | 0.181858 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004100 | SBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004370 | RBH | 0.000000 | 1.603043 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004310 | SBH | 0.000000 | 0.000000 | 0.000000 |
