Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_02G0055400		OGI:02009420 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr02:3067438-3079393		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		TGTTGCTCCTGAGGTTGATGGTTATCAGACTTGTGCAGTTGCTTAAGGTTGATGGTATGCCCCCATACATTTTGTTGTTGTTCAAAAGGAGTTCTTCCAATCTGTTGAGCTGGCCTATAGACTCTGGAATGTTACCACTGAAGTTGTTCTCTCCGAGGTCAAGAGTAGCCAGCTTCCCTAGTTTGATAACATTTTCCCCTTCAAGTGTTCCATGTAAATTGTCGTTTGGAAAAGAGAGGCACTCTATTGAAGTACTCAGCATTGAAGAGTTCGTCTGGAATAGTCCCACAAAGGTTGTTGTGGCCAACCTTGAGGACTCTGAGCCTGGAGCAATTTCCAAGTCCAGGGGGAATGCTCCCACTGAATTGGTTGTAACTGAGTTCAAGCACAGCTAAGGATGGCAAGTTGGTGCAGAAATTAGTTGGTATATGCCCACTAAATCTATTGTTGCTAGCACTGAGCGTGATGAGATGCGCCATTCCGTCTAACGACGGCAACTCCGTGGAAAACTTGTTGCTCGAGATGTTGAGCACCTGCAGAGGCAACTTTAGACCAGTGGTTAGTGGTGGCGACAGTGGTAGAATTCTGCCGAGGCTGTTGAAGCTGACGTCAAGGATGATGATGCTGCCTGATGACATTACTTCTGATGGTAATCCGCCGGATAGTGAGTTGTGCGACAGGTTCAGACGCAGCAAACCTGGCAGTCTGCCAAGAGCAGGTGATATGCTGCCTTCCAGCCTCTTGGAGGCCAACAAGACGTCTGTGACCATGGCGTCCTTGCTGACCATGCTGCTGCAGGTGATGCCTTCCCATGAGCAGCAGTCTGTGCCCAGCCGCCATGACGCGGCGAGGCCACCGTCCTGCGAGAGCCCTGCTAGGAACTGGAGGAGGCAGTTGTTCTCACGCTCTGTGCAGCAGCTGGTGGAAGATGCAGAGGAAAGCATCAGCACAAGAACGAGGCAGAGAATAGACATGGGTAATTTGTTTTTATTGCTGCTGCTACTGGTTGTGGTGGTGGTGGGTGATGAAAATTTGAAACTAATGGAGTGACCATATATAATGTTGCTATTCTGAATTTGTGATTTTCCTCAATTCAGTCGGTACATATTAATTGAGAGAGAGAGGAATAAAGCAGCAACTTGGTACAGATTGCTTGATTGTCTTCTAGAGCTAGGGACCGCAGGGACAAAAATATCAGTCCTTGGATGCTTTTTTCGTGAAACACGGCTTAATGTTAACCCAAATCAAGTAGCAGTACAACCGTTTCTGTCTTTCAGATCAATTCCCTGTGAATGCATGGCAACCTGCTCTGGTTGCAGTGAAATTAAAGTGTGAAAAACTGAGGAGAAAACGATATCTGTTGTCAGATTCTGAAATTTATAATGGAGGTCTGAATGATTCAGTTACCTGTAAGTTGCACGGCCGGAAGAATGAATGCTACGGGGTGGCATCCAATCCATGCATGTTCGGAAGATCAATCGGCAAGTAAGGTGAGGCTGCTGTCTCAGAATTGAAGAAATCTTAGCTTGGATAGTACTATCTGATCTAACAGCACACCAAGTGCAAAGAACAGGCCAAATGCGACGCCAAAGATAACCTTGTCACTGAATTGATCTGTGGAAAGAGTGGAGGCAGGAGCATGAACTGCTTTTGCTGAATTACAGTGGTGACTGAGCATACCACCACATAGCTTTGGATTACCAATGAAGCTTGAGTTGTCAAATGTATCAAACTGGCCTCCAGTTGGAATAGGTCCTTCCAGGTCATTGTTAGAAACATTGAAGGCAGAAAGGAAGTGCAGCTTGTTCAGTTCCAAAGGGATTGCACCCATTAGATTGTTGCTAGACAAGTCTAGCATCTCCAGGTTGGTGAGGTTGCAAATTGCTTGTGGGATCTCTCCAGAGAAGCTATTGAAGCTCAAATCAAGCATATCGAGTGCCTTCAGCCGACCAATCTCTGGAGGGATCACACTTGTAAAGCCATTTCTAGCTACATTTACTTCTGCTCGGAGGATGCGATATTCATATTTCCAATCTTTAAGTGCAGGTAAGTCCTTTTTTGAGGACATATATGTCGGTAATATTAAGACCCTTGCATCAATATTGGCCACTGTCTTCTCTGATTTAAGCATTGGCATCTGTATTAATGTCATCAATATTTCCCCTGTAAAGCTATTATTTGATATATCTAGACAGATGAGAAAGTTGAGTTTGTTGATCCATACAGGTACCGTTCCTGTTAATCGATTGTCATATAAAAACAACTTCTCCAAATTTTTGAGCTTCGATAGCCAGACAGGCATTTTTCCAGATAACGAGGACCCATATATTTCAAGATGTTGTAGGCTTTCAAAACCATCAATTGTTTCATCCTCTGGCAAGATCTCATGCATGAAGTTCTGTTCAATAGATAGCACCGTTAAGTTTCTAAAGCTCTTGAAGATGTGAAGCGCATTTCTGATATTAGCAAAAGCATTACCACCAACTGATAGGAAGGAAAGAGACCTCAGTCTGTCCATTCTCTGTGAGAACTCACCATGGAATTTGTTCCATGAAAGTCTCAGTGCAATCAAATTTGTGCAGTCATAAATGCTTTCTGGAATTGTACCATTGAAGTTGTTCACGAGAAGATCAATTATCATTAGATTAGATAGGCTGGAAAAGTTGATCTTGCCAAGGTCTCCACTGAGGTAGTTGATCTTGAGGTCGAGGATTTTGAGATTTGTGCAGTTGCCTAAAGTTAATGGCAGCTCTCCATACATATTGTTGTGGCCCAAATGGAGTTCCTCCAATCTCTTGAGCTGACCTATCGAGTTGGGTATTTTGCCAATAAACATATTCCTTTCGAGATCTAGGATTGACAATTTTCTGAGTTTTATGATATTGGCATCATCAAGTACTCCATTTAGAACATTGTCTGGGAAAGAAAGGTACTCCAACGATGAAGCATTGAATAGTTCATCTGGGAGAGCACCATGGAAGTTGTTGTGGCCACCCTTGAGAACTCTAAGCATCGAGCAATTGCCTATGTCCTGGGGTACGCTACCGCCAAATCGATTGAAAGAGAGGTCAAGCTCAGTGATGGATGGTGCACTGATGCAGAAAGAACTTGGTGCCTGTCCCGTAAAGCTGTTGTTACTGGCATTCAGAGCCACCAGATTGTTCATCACCTTCCATGTGTTTGTTGGAAATTGTGCTGTAAATAAGTTGCTCGAGATGTTGAGTACCTGCAGAGGCCGGATAGTTGTTTCACTTATTTGAGCTGAGAACTCCTGCAGAGCTCCACTTAAGTGATTGAAGCTGATGTCAAGGATGACGAGGCTGGTTGACGACACCAACTCCTCCAATGGAAGTTCACCGGAGAGCAAATTGTGGGACAGGTTGAGGCGCATCAGGCCGGTGAGGTTGCCAAGGTATGGTGAGATGTGCCCTTCAAGGCCCTTAGAAACCAGCGAAATTTCGGTGATCGTTGCATCTGTGCCGCAGGTGATCCCTTCCCATGTGCAGCAATCCGTGTCATTCTGCCATGACACGGCGAGGCCACCGTCCTCCGAGAGGCCGGCAAGGAACTGGAGGAAGAAGCTCTTCTCATGATCTTTGCAGGAGCTGGTGGAAGAGGCTAAACTCAGTAATAGCACAACAGCAAACCCAAGTAAATCCATGGGAAATTTGCTGCTGCTTCTGCTGCATGGAAACTGGGAAGGTCTCATGGTGGATTTTTTTTTCTTCTCAGAATGGGTACAGTTTGGATAGATCACTATGCAGTAGTATTATATTGAGTAAAGATACTTTAGAGGTGAATAATAGCCACAGCCTGCAATGCCCATTTGCTACCGATGGTTAGTTTCAGAAGAACTTTGCTACCGATGGTCCTTGTTCATTGATTGCGCAGAAAGTAATACCGATGACTATGTTATCCCGTGCCTGTCCAATTGTTGCATTGGTTCAGACAACTGTGACGACCGCTGTTTCAAGCTTGACAATTGACAAAACTATGAAAAATCCTGGTCGCCTCCTGCTGTCATCTTTGCCTGTCTTCAGCCGCCAACACTGCAGCAATATCAGCTAAGTTCTTCTCTTTGTTTGTTTCCATTTTTTCCCCTCGCTTTGATTGATGGTGTAAAATTGAAGGTGCTAGCAACAAATTTTGGTACCTCACACCCCATCAGCAACTAAGTTGCTTGACCATTTCTTTGTTGCTGCTGCTCTTTGCTCGACCTTCCTGGCCAAAGAAAAGCTATTTTCTTTTGCAACCATTCTTAGTTAAATCCTTGTCACATTGACATTTTTACATCATCCTGATGACTTCTCTTGGCTCTTGCAGCTTCAGATGATAGACGTGCTTGCTTGCCACCAAAAAGGAGAAATGCAAGCATATGTTTCATGAAACAGCCTGAGCTCAATTGACCAAAGGCTGAAGCAACATGCTAGGGGAAAAAAACAGTTGTTATGTTTTTTATCCATTCAGTTAAAACTTATAAGTAGTAAGCACAAGAGAGGCAGCAAGGCCAGCAAAATTCAGATGACTACTCAGATGCAGCATGAAAGTGGAGTACATATCCTGACCTGGAACATATGGACAGGATATCAGGATCTTAAACTGCCTTCATGATCCAGTCCATTTTGACTGTGCGCAAGAGCCCTTTCTTGGCTAGCTGCTTCTCCCAATTGATTTTTGAGTGTCCCAACATGCACTGTTTTACAACGATCTACGTTGAGCAATGAATGTTTTACAAATAAGTTCACATCGGAATATACTTTGTTCCTATTATTATTGCTTATTACTCTCTTTGTTTTATATTAGAGTAAATTTCATCTTGAACCACCTATATTGACCAATGTGGCATAATGGGCTAGGGCTAAGTTTCTCTTTTCACTTAACACCACCTAATTTTACAATCTTTTTCAAGTTGGACCAAGTTTACGGCATGGGCTGCGTTTCGGCCTAATCCACGCGAGCAGCTGGTGTTTGCTCATGGTGGCAGTGGTGCGCGATACCAGGAGCGTGCGCGACGCGTTGGTGTGGTCATCGGCGAGGGCGAGCATGTCGTCGTCCAGTGGACACGGACTCTGTGGTGATAACGCTCGGCCCTGTCGCGCTCAAAACAATACTACGGCACATCTGATTACGTTGACAGGATCTGAGACCATACCAGAACTATCCCATTCAGATCATGCATGTGAATCAAGATCCGATCTTCTCTTTAATTTTCTTGTGAAAATTCGACATGTTTCCGGTTACCAACCGAGGAACACGGATTAATTACTCTAGTTTTTTCGAAGAGCAGCAGAGGAATATTGATTACCCCCACAAAACCCAAATCTCATAGGAATTACTGAATGCATTGCTTTGTTTCACTCTCCCAAGCCCCAGGGTCAAAACTTTCCTCCATGGATTGCTCCATGATCGAATCGCAGATGCATATACCTGTCTACCTCATAAACCCAACAAGCATCCTAGCAACGAGGCAGCCGACGACCCCAGTGATTCCATCCTCGGGAAGCCATCGATCGAGGTGGCATGGGCGTCCACCAGGCAGAGGCCCTTTGGCCTGACGCTGGCGACACGGTTGGATGACGAGACTTGCTCCACCTTGGCGCCGGTGGACGGTGGACACGGTGGCGTTTGTGTTTCGATTGTTGAGTTCACGCCGCTGCACATCAGCCGTGTGTGAACAGAGACTTTTTTGGGTTGGGAAGGAAGTACTCGTACCAGAGAGGGAGGCAGAACCGCCGTCGAGGGAGCCCTCGCCGGAGCCCCGAGACGGGGACTGCCGACCGCTGGTAAACGCACCTATTTGCGTGGGCCGAAGCCCAGCCTAGTGGGCCAATCAGTAAACCTGGTTCAACTTGCAAAGGATGGTAAAAATAGGTGGTGTAAAGTGAAAAAAGTGACCCACCCCTATCCCAATGTGCAACTTAGGTCAATATAAGTGGTCTAAAGTGAAATTTACTCTTTATATTATATAAGACACTTTGACTTTTTTTTCTTAAACTATTTAAAATTTGACTAAATTTATAGAAACACAACAACATTTTTAACACCAAACAAATATGGTATAAAAATATACCAAAAACTAATTGGTGTTATAAGAGTAGTTATATTTATATACCTCTATAATTTTGATTTAGAAAAAAAATAAAATGCTTATAATATGAAGAGGGTGTAGTGCTTAGGTTCCAGAATCCAGCTAGGAACTGGAGCAGGTACCGAGGCATCAGCACAAGAAATATGGATAGTTTGTGGCTGCTGGACTGCTGGTGCTGGATGAATAATTATTTTTCCCCTGGAAAAGGACATTGGTTTGGTCACATCCATGTGATTTTTTTTTTCAAAATTGTACTTTACTGCGTTTAATTTTTTTTGGGCGAAAACTAACACGGTTGATATGGATTGTTTTTTTTTCTCTCTTCAAAACAGTACTTTATTGCGCTTGATTTTTTTTTGGCAAAAACTAACACGGTTAATATGATATGGAGTGCTTGCGGTGGAATGGAATGACCATGGCGCCACGCTGGGTGCAGTTGCCATATTTGTTCGTAGCGGCTTAAAAGTTAACGCTAAAAAAACTACATTAAAAATATATTAAAATGCTTTGCAAAAAAAGATTAAAATTAAGTTTAAAATTCAAATTTAAGATTTTGCTTTAACTTATTAGGCCAATGAGGTGCGGGCTCACCGGCCGCCGGCGAAGACAAGAGAGTGCTCCACGAGTTCACGGTAGGACGATTTACGTGCGGCCCATTTTTGTTGGGCCGTAACTGGATTGTAACTAGAATGCGGCCCATAATAGTTGGTCCAGGACGGGATTTCGATTACGTGAGGCCCAAATATGGGATTAGTTGAGTAGGGCAAGGGCCCAAGACTTGGCCCAATTGCCACAGGCACCGTCTCGTCGTCTCCGTGGCGACAGCGCCGCCGCTGCTCTGTCGCCGGCGGCCAGCGCAACCGCCGCCTCTTCGGCTCGCCGGCGGCGCGCGGGGACTCGAGGAAGGCCTCTGCGTCGCCGTCACTACTACCCATAGCTCGAGTATGCAACGCGTGGCCATCTCCATCTGCTCTCTATTACTACTATTTTCTTAGCGTGAATCTGAAAATTGAAGCGATATAGTTGCAGACGATGGGGATTCTCAAACTATACATACTAGTTCTGATAGAGACAAATTTGCACATGATTTTCACGAATTTGAGTAGTGACCATCATTCAGAATGCTCAATCTGCACACCTGAGTTGTGGCAGCTAGATTCTTGTCTTCAACTCTGTTCATAGAGTTGGAAAATTAATATGCCTTGAAGAGATCTTAGCCTTTTTAGTACCATCTGATCTAATAGCACACCATAAGCAAAGAACAGGCCAAATGTGATGCCAAAGATAACCTTGTCACCGAATTGATCTGTGGATGAAGTAGGGCTAGGAAGTGCTCTTGCTGAATTACAGTGGTGACTGAGCATACCACCACATAGCTTTGGATTACCAGTGAAGCTTGAGTTGTCAAATGTATCAAACTGGCCTCCAGTTGGAATAGCCCCTTCCAGGTCGTTGTTGTAAACATTGAATGCAGAAAGGAAGTTTAGCTTGTTCAGTTCTAAAGGGATTGTGCCTGTTAGATTGTTGTTAGACAAGTCTAGCATGACCAGCTTGGTGAGGTTGCAGATTGCTTGTGGGGTCTCCCCAGAGAAGCTATTGAAGCTCAAGTTGAGCATATCGAGTGCCTTCAGCTGACTAATCTCTGGCGGGATCGCACCTGTAAAACCATTTTTGGCTATGTTTATTGTTGTGTGGATATATTGGTATTGTCGGTTTTTGATGAATGGAATGCCGTAAAATCTCATGTTTGGGACACTTACATCCAGATTGGTTCTCTTGTCTGACTTCAGCATTGGAATCTGCGTTAATATTGTTGGAAATTCACCTGTAAGGTTGTTATTGGATATGTCTAGATAGAAGAGGAAGTTGAGGCTGTTGATCCAGGCAGGCACTGATCCGCTTAATTGATTATTGGATAACTGCAGCACCTTCAATTTTGTGAGCTTTGATAGCCAAAGAGAAATTTTTCCATGTAAAGAAGAACCACTTATTTCTAGGTACTGAAGATTTTCAAAACCATCCATTGTTTCATCTGCTAGCAATGTCTCATGGTTGAAGTTCCCTCCAAGAAGTAGAGTTTTTAAGTTGCTAAAGCTCTTGAGGATGTAAAGTGCCTTCGTGATATTCGTAAAATCATTCCAACCAACTGACAGGCAGGAAAGAGACCTCAGTCTGTCCATTCTGTGTGAGAACTCACCATGGAATTTGTTCCACGAAAGTCTCAGTGCAATCAAATTTGTGCAATCATAAATGCTTTCTGGAATTGTACCATTGAAGTTGTTCACGAGAAGATCAATTATCATTAGATTAGATAGGCTGGAAAAGTTGATCTTGCCAAGGTCTCCACTGAGGTAGTTGATCTTGAGGTCGAGGATTTTGAGATTTGTGCAGTTGCCTAAAGTTGATGGCAGCTCCCCATACAAGTAGTTCTCACCCAAATGGAGCTCCTTCAATCTCTTGAGCTGACCTATGGACTTGGGTATGTTTCCACTGAATATATTCTGTTGGAGATCAAGGATAGACAATTTGCTGAGCTTTATAATGTTGGCATCATCAAGTACTCCATTTAGATCATTGTTTGGGAAAGAAAGGTGCTCCAATGATGAAGCATTGAATAGTTCATCTGGGAGTGGACCCTTGAAGTTGTTGCGGCCACCCTTGAGCACTCTAAGCATGGAGCAGTTGCCTATGTCTGAGGGTATGCTGCCACCAAATTGATTGGAAGAGAGGTCAAGTACCCCGAAGGATGGTGAGTTGATGCACAAAGAACTTGGTATCTGTCCTATAAAGCTGTTGTTGCTGGCATTAAGAGCCACCAGATTGTTCATCACCTTACATGTGGTTGTTGGAAATTTCCCTGTAAATAAGTTGCTTGAGATGTTCAGTACCTGAAGAGGCCAGATAGTTGATTGAATGAAGAGCTCTTGCAAAGCTCCACTGAAGTGATTGAAGCTAACATCAAGAACGACGATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGGTGGGTTTTCTTTTTCAGATTGAGTATGAGTTGGATATTTACTGTTCATTACTCTTATATTGAGTAGGAATGAAAGCAGGAACAAATTTCATCTTTGTTGATTGCAGTTGCTAGCTGATCGAGTGGCTAGTCAATGGTCATCACAAAGAATAAGTGGTCAAGGTCATCAGGAATTCAGGATCAAAAGATGAATTGAGAGTTGAATGAGAGTGACAACCTGCAGTGCTTGCTTGCTACCGATAGTACAGTCATTGATTGGGCAGGCAGTAACATCATGAATTGTGTCGATCACAACTTTATTCAGCAGTGAAGGAAATATCCTGGAACATATGGTGTAGTAAGTGGTAAGTTAGTAGACCAAGTCTTCCCTTTCCGGTTGATCATCAGCTGTTGCATTTCGAAAGTTTGATTCCCTACCTATAGCTCCACATTTGCCGGCTGTTTACCGTTCCTTTTTTTTCCATAATTTTGAGTTTTTGACAACAATCAAACCACTAGCTTCACACGAAATGTTGTAAAATCTGTAGCAAATATGGTAGGCTCTACGTATATACATGCATGTTTCATACTTGAATAATAACGTAGGAGATACATTTCATCAAATAAAAGAAGTATGCTTAATATTTCATTGGGGCTCATCAGAGAAGCTTAGTTCTGCAGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGTGAAACTAGCATGCATGCAGGTATGAGGTAACCAGGCTTGCTAAGATTTGCTCAAATCTGTTGCAGATATAGTAGGCACTATAATCCCATAAATATCAAGTCTCTCGAAATAAAATGATGATTTTTTTAAGGATTTTGTCTTTGTTTTCTTGTACAATGCAAATCGTGGCAAGTACTGTTTATTTCTTCTTGTGTACTCATATATCGATGTTGTTATTCAGCGATCAAAGTGAATGATGACAATAAAGTTACACGGAATTCTGCAAGAATGAATTTTTGATACATTTAGACTGCTTCGATTCACATCATCTTACATAGCTGTGTACTTATACATTACCAGAATTCCTGGATCACTCTTCACCCATGTATTCCTTCCAGTTTATTATCAAAAAAACGAGTTCCCTCCAATGTCCTTTTCTTTATTTTTGTATTTTCCGCCTTTCATAGGAAAACCTGAACCAGAACAAGAGGTATATTTCGTGCACAACTAGACTAAGCTTGTAACCGGACATGCTGCTTGGATCTTAACAGCAGCTCAAACTGACCAAAGTTATCACAAAAAGTACATCAGATCTGCAATAGGACTAGCCAAAAAAAACCTTGATAATACTATTTGATCATATAGCACACCTACACAGAAGAATGCGACAAAAGCAATCGCAAAGATGGTCTTTTGAGTGCTTTGTTCTCTGGAGTCTGAAAACTGGAGGTGTTTTTGCCGATGCACAGGTGCGAATGAGCGTATGACCACACAGCTTTGGGTTCCCATCAAAACCCCAATACTCATATCCAATTGGAACTGACCCCTCTAAGTCGTTGTTAGAAACATCAAATATTGAAAGTGAGTGCACATTGTTCAGTCCTGGTGGGATTGAACCTGTGAGATGGAGGTTAGACAATTCTAACACTTGCAGATTTGTCAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAATCAGCATAAACAGGAAGTTCAAATACCCTTGGATCCAAATGATTGTAGCATTGGCATCTCCATTATTGCTACTGGGAGATCCCTTCTAAGATTGTTGTTTGATATATCTATGAAGTAGAGGAAGTTCAGGCCATGGATCCAGTCTGATATTGGTCCAGTGAGTTAATTGTAGGATAGATCCAAAACTTCCATTTTGAGCAGTTTTGAAAGCCAACGAGGTATTTTTTCCAGACAACGAGCAAGAAGGTACCGAAAGAACCTGAAGACTCTGAAAACCATCAACTATTGGTATGCCATCTGGCATGGCCTTGCCCTTGAAGTTGATTCCCATAATCAAAGTGTTGACTTTTTGCAGTTCTTGAGTGCATGAATTGCATTTGAGATATTCCCAAAAACATTGTTGTCAAGTGATAGGAACAAGAGGTACTTCAGGTTCTGCCAGTTTCATTTGGAAGGAAGCTGGAATTTTTTTTCCCAATGTAATGAGTAGAGGGTATAGTCTGCCCAGTTTCAGGGTTTCTCCCCCTCCAGTCGGAGGCTGTGCCTCGGACCATGCTCGACATGCTTTTGTCGATGTAACTATACTTTTGTACTTTGTTTTTTTTTTACTAATTCTTAATGAAATTGGTTGGCCACTCTTTGGCTGACCCGGC More
CDS seq		ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGAGAAGCTTAGTTCTGCAGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAA More
Protein seq		MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLILLHGKWKGLMRSLVLQCSALVDAGAGGQDTGPAPVILPCRALGKLQENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYVSDGSS
Function		-

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-1	Chr02	3067438	3079319	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCATCGGAGGCTGTGCCTCGGACCATGCTCGACATGCTTTTGTCGATGTAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLILLHGKWKGLMCSALVDAGAGGQDTGPAPVILPCRALGKLQENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPSEAVPRTMLDMLLSM More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-2	Chr02	3067438	3079393	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGAGAAGCTTAGTTCTGCAGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLILLHGKWKGLMRSLVLQCSALVDAGAGGQDTGPAPVILPCRALGKLQENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYVSDGSS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-3	Chr02	3067438	3079393	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLILLHGKWKGLMCSALVDAGAGGQDTGPAPVILPCRALGKLQENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYVSDGSS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-4	Chr02	3074311	3079319	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAAGTAAATCTGTGGGTAATTTGCTGCTGATTCTGCTGCATGGAAAGTGGAAAGGCCTCATGTGCTCAGCCCTGGTTGATGCTGGAGCTGGAGGCCAGGACACAGGTCCAGCGCCCGTGATCCTGCCTTGCAGAGCCCTTGGAAAATTGCAGGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCATCGGAGGCTGTGCCTCGGACCATGCTCGACATGCTTTTGTCGATGTAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPSKSVGNLLLILLHGKWKGLMCSALVDAGAGGQDTGPAPVILPCRALGKLQENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPSEAVPRTMLDMLLSM More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-5	Chr02	3076496	3079393	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAACGATCAAAGTGAATGATGACAATAAAGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPTIKVNDDNKENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYVSDGSS

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-6	Chr02	3076496	3079393	+	makerRMon
CDS seq	ATGCTGCTCGATGACACCAACCCCTCCAATGGAAGTTCACCAGACAGCGAATTGTGTGAAAGATTGAGCTGCAGCAGGCCGGTGAGGCTGCCAAGAGACGGTGAGATCTGCCCTTCAAGGGCCTTAGAAGCGAGCAAAATATCAGCGATCCTCATGTCTGCATTACAGGTGATGCCTTCCCATGTGCAGCAATTTGTGCCGTTCCGCCATGATGCGGAGAGGCCACCGTCTCCTGAGAGGCCAGCAAGGAACTGGAGGAGGACACTCTTCTCCTGGTCTATGCAGGAGTCGGTGGAAGAAGCTAAACACAGCACCGTCAGCAGAGCAAACCCAACGATCAAAGTGAATGATGACAATAAAGAAAACCTGAACCAGAACAAGAGGTTGAAAAGTTTCGGTGGAATATGCCCTGAAGAGCTGTTGAAGCTCAAGAAGAGCACTGTGAGTGATTTCAGCTGGCCGACCTCTGAAGGAATTGCACCAGTAAGCTTATTGTTTCCAAGATTTAGCATTGCAGGGAGAGCATTGGTCATACCATATGTAAGTGATGGCTCTTCATAA More
Protein seq	MLLDDTNPSNGSSPDSELCERLSCSRPVRLPRDGEICPSRALEASKISAILMSALQVMPSHVQQFVPFRHDAERPPSPERPARNWRRTLFSWSMQESVEEAKHSTVSRANPTIKVNDDNKENLNQNKRLKSFGGICPEELLKLKKSTVSDFSWPTSEGIAPVSLLFPRFSIAGRALVIPYVSDGSS

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0055400	OsZS97_02T0055400-mRNA-7	Chr02	3071097	3075420	+	makerRMon
CDS seq	ATGGGAAATTTGCTGCTGCTTCTGCTGCATGGAAACTGGGAAGGCACCGTCTCGTCGTCTCCGTGGCGACAGCGCCGCCGCTGCTCTGTCGCCGGCGGCCAGCGCAACCGCCGCCTCTTCGGCTCGCCGGCGGCGCGCGGGGACTCGAGGAAGGCCTCTGCGTCGCCGTCACTACTACCCATAGCTCGAATAGAAGAGGAAGTTGAGGCTGTTGATCCAGGCAGGCACTGA More
Protein seq	MGNLLLLLLHGNWEGTVSSSPWRQRRRCSVAGGQRNRRLFGSPAARGDSRKASASPSLLPIARIEEEVEAVDPGRH

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.7668005	0.463171	2.2909955

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0156700	RBH	0.492722	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	NA	NA	NA	NA	NA
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0156700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0004330	RBH	0.000000	0.000000	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0004530	RBH	0.000000	0.000000	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0004160	SBH	0.000000	0.000000	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0003990	SBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0004340	RBH	1.665661	0.000000	0.055152
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0053000	RBH	1.2185155	0.6556885	0.2696535
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0004330	RBH	0.009666	0.0	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	NA	NA	NA	NA	NA
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0004570	RBH	0.000000	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0004270	RBH	0.000000	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0004540	RBH	0.000000	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0004520	RBH	0.000000	0.000000	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0004270	SBH	0.000000	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G004320	RBH	0.000000	0.000000	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0004310	RBH	0.000000	0.000000	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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