Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0064070 | OGI:99060200 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg481:4000-8583 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tacgcgcgggctacctttctagtaatatatacaatgcatatgctatatatagtgatgtacctggtgccatgtaaccaaccgttccagacatgctagcaacaatcatcgagttgtcatcgcctaatagcaacttcgcaatgccaaaatccgccacatgtgctgtcatgtcattgtcaaatagcacattgctaggcttcaaatcacagtgcaaaaccacctcgtagtgctcatggtgcagataatgaactgccatggacacatcgagcatgatattcagcctctcgaggaatcccaggtgcattgtgccctcggagcagtgtagcattttctctaagctgccatttggcatgaactcaagaaccaatgctttgaagtccatgttcgaacaggtatttagtatctttatcaggttgcggtgtcgcaccatgcgtagtatatgacactcagcatcaaagattctgatcgaatgctccagcttcatgtctagaacttttatagcaacaacaaaccactgccagttggcctttaaatacttttccaaatcctccagatcccaacaggttatcatcactgaaattctcagtggcaagacgagatcatgataggtgagtaactgagggcctatgacatctgccatatcaccataagctttggccttcttgtgtttcttttcaaacattaagtataagaaaacagcaaggatgccagaagctaccaagatggctgggagtagaagttttagaagaggtctgctataaggtgagactttttaagacagggtgaaaatccaagacgtggagaaccacataacccagcattcccaatcaaagattgtctcgtaaggttattagagaaaattcctccctctggtattgggccttcgagcctattgaaggagaggttcagcatagtcaagtcggtaagattttcaaggaacatgggaatggaaccagagagttgtttgaggaaaggtctaaccatgttaagctagttagactttggagagtgctaggaattgaaccttccaaggagttgtgtgagagaatcagataggttagcatattgagctgtcccaatgattctggatgcttccattcaagaagttactagaaacatcaatttggtcgatttgtcttaggccgcaatgtcggctggcagagcaccgacaatggaattacaagaaagatttatttggataaggttatgaagttggaataagcttgctggtatctttccacttaactggttgttggacaagtcaatgtaatctaacctgctaagattgccaatgctatctggtatggagccagagattttgttcctttcaagaaatagtcgttgtagatcaaaagcgtgcctatctgtgttggcaaaggcctaaaatgtgattgttagagacatcaagcaacccgaatttcccatcgtagcgattgattctggaattgccccagtgagttggttgtaaccaagatctatcagttcaaggctgcttaagttggacattttttctggaagactacctgccaacttattatgatctgcaatgaaactaattaaccgtgccgagagattacccaaatggtctggaagggcacctacgaaagaatatggtccaagataagtcttccagctgcctacattctgaaagagatgacaagaagcccatattcccctctaggttgttgtgggtagaacgagcttctgtaaagcaacaatgttccccagtgtccgcggtaccgagccagacaactgattagctgaaagaagcaagtacacaagtttctgaagtaatcctatctctggtggaatatttcctgtaaggttgccaaaagagagctctagtactgtgagcgggtgaggttgctaagaacagctgggattgtaccaacaagcttatttccacccagtgaaactacttcaagtcgtgacaatttagctaaccatgttgggagaacatccacgaaagaattgctatataaatagatttcccttaagtactggcatgatgcaagccccgcaGgaaaccgaccggcgaTtctgttccgggcgagggaaataaatcgtagcatagggagcctgaatgtctgattattgtttggtattggtccggtcaggttcccgttgcctgccagcgccatgactcgaagccaggacatgttgtacagggcttgtggcactaggctggagagctgattgtactgcatgtctagaatctcgagttgagacagggaggcaacaccatccggtataggacctgataggctgttgtttccgaaagataggtacctcaaggaaggcggttgttgaatagaaaggcgggatctgcccactcaaggagttcccttctagagaaatcacctgaagattgtgcagatgcagcaacaactctggaggtatcttcaagaacctcgagccttgctaggtttcccaggtcaggaggaatcctaccagagaggctgttttcacctagacaagatgtctaagacggcgtagcttgccaagatcagctgggatggaggccgtgaggttggtgtcggtgacctgaggaagggagaaacgagagtttaccgaggagaggagtgatgggtccatggaggggcgtgtgtggcagcgacagtccagtgacacgacgatgtcggcggcggcggctgcaggtgacaccaagccagtggcagaaagaggtgctggtgctccagttgcttgtcagaacgccgagggggtcggtaagctgggacttgaaagccagcagggcggcgagatcggtgtcgctgctgccattggcggtggtcgtcggacttggaagaatagcatgaggtggacgatagcactactactagtacagcaatggaaacgcatgctgatgatgtagtggccatttgagctctgctcgatcgtgtggctgtacatgttctcgtgcaagcatatactacaccagaaaaaatagtgctcatcatttatatggggaacgagctagctcatgtggttgtgcacacaattttttctgtttatttcaacatgtgccgtacttgcccggcaggctgcagtagccgcatggcaagggatagccaatttaaatgctagagcctagagctatcagttaatcctagacctgagtgccactgaaaaagaaaatgagaaacaatgcccacaactaggggtgaaaacggaaacggacggaaatcatctttatcgttttcgttttcatatatattttttaatcggaatcggaaaccccagatacgaaaacggaaccgaatattatcgaaatcgaaaacggagtgaaaacgaaccgcgcgaatacggtaacgaaatttatcggaataaaaaaacccccctcaaactgataatccaattctcaagtctcaacagtcaataattcaacataaaacataatcatataagtcaaattgttaagtattaatagtacatcacaaacacaatctatgaaacaaattagtaatgctgttgataaatcccaatgcaggtaaaaaaatatctcttatataattttagattggcataactatttttttaaaaatatagccaatatcatggtattcactattcagtgcttaaaaaaataattcagggtattttgtgatttctggaaattccgagaaatttctggaatgttttcgacagattctgagttccaacgaaaactactcttatcattttcgattctgtttctgaggaaatatttacaaatccgtttccgtttctaaaaaattctgaaaaaaattccgatcgacagatttgttttcgaaaataggtccggaatccggaaagtttatgtaccgtttttacccgtggcccacaacgagaccaaaattgagggtgttgacgctgattcaggtcacatttttactatcacatagggcatgcatttacaacacgaattgatataaaccgtctacaagagatgccaactactccctccggtttcattttaattgacgctttggacaatgacacgctctacaagatatacctttgaccttatttttctattataatatatacaataaataaatgcatgtttacttttattatagtgttttgaaagacaaatctatatatgtttttctaatttctttaaactaaatatttttaaagttattgatggtctatatttaaagttattgatggtcaaagctataaaagtttaacctcaactttgtccaaaacgttaattaatatagaaccagagggagtagacaatttgatgatatgtgggtgtgtttagatccaaactttggatccaaagtttgcaaaattccatcacatcaaTctgtcatacacatacaacttttcagtcacatcatcttcaatttcaaccaaaatccaaactttggatggaactaaacgcagccatactaggagtctgatgcttcttcgtcaccggctgcttccatgttagttgttgacttgttgtggacctattaaccttacaggtcccctccttcatatgcataaccatatgatcacaccagcggtgcaagctgaaatgttcattcttgcagaagccgggaaccctgaggccaactccagagttgatgtaggagtactattgattactggcat
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| CDS seq | atgccagtaatcaatagtactcctacatcaactctggagttggcctcagggttcccggcttctgcaagaatgaacatttcagcttgcaccgctggtgaaaacagcctctctggtaggattcctcctgacctgggaaacctagcaaggctcgaggttcttgaagatacctccagagttgttgctgcatctgcacaatcttcaggtcctataccggatggtgttgcctccctgtctcaactcgagattctagacatgcagtacaatcagctctccagcctagtgccacaagccctgtacaacatgtcctggcttcgagtcatggcgctggcaggcaacgggaacctgaccggaccaataccaaacaataatcagacattcaggctccctatgctacgatttatttccctcgcccggaacagaAtcgccggaaatattccaccagagataggattacttcagaaacttgtgtacttgcttctttcagctaatcagttgtctggctcggcctttgccaacacagataggcacgcttttgatctacaacgactatttcttgaaaggaacaaaatctctggctccataccagatagcattggcaatcttagcagacctcttctaaaacttctactcccagccatcttggtagcttctggcatccttgctgttttcttatacttaatgtttgaaaagaaacacaagaaggccaaagcttatggtgatatggcagatgtcataggccctcagttactcacctatcatgatctcgtcttgccactgagaatttcagtgatgataacctgttgggatctggaggatttggaaaagtatttaaaggccaactggcagtggtttgttgttgctataaaagttctagacatgaagctggagcattcgatcagaatctttgatgctgagtgtcatatactacgcatggtgcgacaccgcaacctgataaagatactaaatacctgttcgaacatggacttcaaagcattggttcttgagttcatgccaaatggcagcttagagaaaatgctacactgctccgagggcacaatgcacctgggattcctcgagaggctgaatatcatgctcgatgtgtccatggcagttcattatctgcaccatgagcactacgaggtggttttgcactgtgatttgaagcctagcaatgtgctatttgacaatgacatgacagcacatgtggcggattttggcattgcgaagttgctattaggcgatgacaactcgatgattgttgctagcatgtctggaacggttggttacatggcaccaggtacatcactatatatagcatatgcattgtatatattactagaaaggtag
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| Protein seq | MPVINSTPTSTLELASGFPASARMNISACTAGENSLSGRIPPDLGNLARLEVLEDTSRVVAASAQSSGPIPDGVASLSQLEILDMQYNQLSSLVPQALYNMSWLRVMALAGNGNLTGPIPNNNQTFRLPMLRFISLARNRIAGNIPPEIGLLQKLVYLLLSANQLSGSAFANTDRHAFDLQRLFLERNKISGSIPDSIGNLSRPLLKLLLPAILVASGILAVFLYLMFEKKHKKAKAYGDMADVIGPQLLTYHDLVLPLRISVMITCWDLEDLEKYLKANWQWFVVAIKVLDMKLEHSIRIFDAECHILRMVRHRNLIKILNTCSNMDFKALVLEFMPNGSLEKMLHCSEGTMHLGFLERLNIMLDVSMAVHYLHHEHYEVVLHCDLKPSNVLFDNDMTAHVADFGIAKLLLGDDNSMIVASMSGTVGYMAPGTSLYIAYALYILLER |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0064070 | OsLiXu_Ung0064070.01 | ChrUN-Ctg481 | 4000 | 8583 | - | NAM | ||
| CDS seq | atgccagtaatcaatagtactcctacatcaactctggagttggcctcagggttcccggcttctgcaagaatgaacatttcagcttgcaccgctggtgaaaacagcctctctggtaggattcctcctgacctgggaaacctagcaaggctcgaggttcttgaagatacctccagagttgttgctgcatctgcacaatcttcaggtcctataccggatggtgttgcctccctgtctcaactcgagattctagacatgcagtacaatcagctctccagcctagtgccacaagccctgtacaacatgtcctggcttcgagtcatggcgctggcaggcaacgggaacctgaccggaccaataccaaacaataatcagacattcaggctccctatgctacgatttatttccctcgcccggaacagaAtcgccggaaatattccaccagagataggattacttcagaaacttgtgtacttgcttctttcagctaatcagttgtctggctcggcctttgccaacacagataggcacgcttttgatctacaacgactatttcttgaaaggaacaaaatctctggctccataccagatagcattggcaatcttagcagacctcttctaaaacttctactcccagccatcttggtagcttctggcatccttgctgttttcttatacttaatgtttgaaaagaaacacaagaaggccaaagcttatggtgatatggcagatgtcataggccctcagttactcacctatcatgatctcgtcttgccactgagaatttcagtgatgataacctgttgggatctggaggatttggaaaagtatttaaaggccaactggcagtggtttgttgttgctataaaagttctagacatgaagctggagcattcgatcagaatctttgatgctgagtgtcatatactacgcatggtgcgacaccgcaacctgataaagatactaaatacctgttcgaacatggacttcaaagcattggttcttgagttcatgccaaatggcagcttagagaaaatgctacactgctccgagggcacaatgcacctgggattcctcgagaggctgaatatcatgctcgatgtgtccatggcagttcattatctgcaccatgagcactacgaggtggttttgcactgtgatttgaagcctagcaatgtgctatttgacaatgacatgacagcacatgtggcggattttggcattgcgaagttgctattaggcgatgacaactcgatgattgttgctagcatgtctggaacggttggttacatggcaccaggtacatcactatatatagcatatgcattgtatatattactagaaaggtag
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| Protein seq | MPVINSTPTSTLELASGFPASARMNISACTAGENSLSGRIPPDLGNLARLEVLEDTSRVVAASAQSSGPIPDGVASLSQLEILDMQYNQLSSLVPQALYNMSWLRVMALAGNGNLTGPIPNNNQTFRLPMLRFISLARNRIAGNIPPEIGLLQKLVYLLLSANQLSGSAFANTDRHAFDLQRLFLERNKISGSIPDSIGNLSRPLLKLLLPAILVASGILAVFLYLMFEKKHKKAKAYGDMADVIGPQLLTYHDLVLPLRISVMITCWDLEDLEKYLKANWQWFVVAIKVLDMKLEHSIRIFDAECHILRMVRHRNLIKILNTCSNMDFKALVLEFMPNGSLEKMLHCSEGTMHLGFLERLNIMLDVSMAVHYLHHEHYEVVLHCDLKPSNVLFDNDMTAHVADFGIAKLLLGDDNSMIVASMSGTVGYMAPGTSLYIAYALYILLER
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0208900 | SBH | 8.128173 | 6.831915 | 1.593455 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10310 | SBH | 5.341686 | 4.505126 | 0.397955 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0208900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006920 | SBH | 1.488999 | 0.0 | 0.410213 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006900 | SBH | 0.616126 | 0.0 | 0.493502 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004950 | SBH | 0.351912 | 0.244407 | 1.702016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006760 | SBH | 17.078571 | 0.0 | 2.234451 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006740 | SBH | 1.454289 | 0.0 | 0.872801 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0440500 | SBH | 0.005107 | 0.2015625 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006730 | SBH | 1.100941 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024760 | SBH | 0.027641 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006820 | SBH | 8.374599 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006840 | RBH | 0.000000 | 0.0 | 0.446228 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006870 | SBH | 1.032044 | 0.0 | 0.183080 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006680 | SBH | 2.995412 | 0.0 | 0.859897 |
