Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0007700 | OGI:02002360 | 10/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg62:89506-91831 | ||||||||
| Gene Symbol | RLCK62, OsRLCK62 | ||||||||||
| DNA seq | ATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGTGCGTCTTTTTTTGCAGCAAAATTCTCTCTCCAACCAAACCAGTAGTACACTCATTGGGGCAACCCTTTGCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAGTATTGTCCCTCTCATCAGTTAGTCTCCTCCAATTCTTGTACAGTTTAATTTTCTATTTGTCAATCGCCTAATTTTTCATATTTATCGGTCTCCTAATCTAAATTTGCGATCCTAGCTAGCTACTCCCTCCATTTCATAATATAAGACTTTCTAGCATATGTGTCTAGATTCACTAACATCTATATTAATGTGGACAATGCTAGAAAGTTTTACATTATGAAACGGAGGAAGTAGTTGTTAGTTTTGTCGTTAAATATACGTTTCCATACATACATACATTTCATTTTGTGACAACAAGTTGACACATATAAATTATTATATATAGGTTGGTCATACAACAAAGGAGAGCCCCTACTTATCTATGAGTACATGCCCAATGGTAGCTTAGACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTGTCAGGGATATTGCCACCGGCTTGCACTACGTTCATCACGAGTATGAGCCCAAGGTGCTCCACCGCGACATCAAGGCTAGCAACATCCTGCTTGACTCCACCTTCCGTGCCCGCCTTGGTGACTTTGGTCTCGCCTGCACCGTCGCCGTCGGCCGGAGCTCCGTCTCGTGTGGTGTCGCAGGAACATTCGGCTACATCGCCCCGGACTACGCAATTAACCTGAAAGCAACGCAGCAGACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCAGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| CDS seq | ATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCAGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| Protein seq | MQLLLVIIILSTVMISSSDAYYQSCRCLGDGKNNQTSCDQAIDDSIKGSGQLIFRRIQPPITSVAFNVSFIGSLAFILRPVPAGGEYSNNSDAYGSLVFSGNTYNKTTTIITHSDCCSTGDSSSNVFVKMGALKNVSTFGVNITISRKASNIQIVQGNNYTISVWIDYNRAAEAADRSISVFVAKARETKPKEAIIVNKDDNISKGATLQGCIFSSMDLQRLHQISDMDVTFAYGQHVSHSPSRSLPTILASVLGPAGGAVIAAAVTWLYFNSSYRRWKKDFDQLAKSMQSLPGVPVKISFADIRKATNNFHDTMKLGSGAFGAVYRCKLQSLNLKEQPVEVAVKKFTRADTRSYQDFLAEVSIINRLRHKNRHIFARTDQLHGGHHTTIRQWDTRYNITDVYAFGVLVLEIVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGEFDIEEARRLLLLGLACSNPNPSDRPTMVVAVQVIAKLAPAPDVPLEKPTVVCFPPLTLPVGSSSSECTDYYVTAKGSLQIKSSMV |
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| Function | Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0007700 | OsLiXu_Ung0007700.01 | ChrUN-Ctg62 | 89506 | 91831 | + | NAM | ||
| CDS seq | ATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCAGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| Protein seq | MQLLLVIIILSTVMISSSDAYYQSCRCLGDGKNNQTSCDQAIDDSIKGSGQLIFRRIQPPITSVAFNVSFIGSLAFILRPVPAGGEYSNNSDAYGSLVFSGNTYNKTTTIITHSDCCSTGDSSSNVFVKMGALKNVSTFGVNITISRKASNIQIVQGNNYTISVWIDYNRAAEAADRSISVFVAKARETKPKEAIIVNKDDNISKGATLQGCIFSSMDLQRLHQISDMDVTFAYGQHVSHSPSRSLPTILASVLGPAGGAVIAAAVTWLYFNSSYRRWKKDFDQLAKSMQSLPGVPVKISFADIRKATNNFHDTMKLGSGAFGAVYRCKLQSLNLKEQPVEVAVKKFTRADTRSYQDFLAEVSIINRLRHKNRHIFARTDQLHGGHHTTIRQWDTRYNITDVYAFGVLVLEIVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGEFDIEEARRLLLLGLACSNPNPSDRPTMVVAVQVIAKLAPAPDVPLEKPTVVCFPPLTLPVGSSSSECTDYYVTAKGSLQIKSSMV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0156000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06160 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0156000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004290 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004490 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004340 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004230 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004260 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004260 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0054200 | RBH | 0.013093 | 2.2930885 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004210 | SBH | 0.087713 | 0.227309 | 0.100002 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
