Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g06160 | OGI:02002360 | 10/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:3076495-3078826 | ||||||||
| Gene Symbol | RLCK62, OsRLCK62 | ||||||||||
| DNA seq | ATGATGATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGTCCGTCTTTTTTTGCAGCAAAATTCTCTCTCCAACCAAACCAGTAGTACACTCATTGGGGCAACCCTTTGCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAGTATTGTCCCTCTCATCAGTTAGTCTCCTCCAATTCTTGTACAGTTTAATTTTCTATTTGTCAATCGCCTAATTTTTCATATTTATCGGTCTCCTAATCTAAATTTGCGATCCTAGCTAGCTACTCCCTCCATTTCATAATATAAGACTTTCTAGCATATGTGTCTAGATTCACTAACATCTATATTAATGTGGACAATGCTAGAAAGTTTTACATTATGAAACGGAGGAAGTAGTTGTTAGTTTTGTCGTTAAATATACGTTTCCATACATACATACATTTCATTTTGTGACAACAAGTTGACACATATAAATTATTATATATAGGTTGGTCATACAACAAAGGAGAGCCCCTACTTATCTATGAGTACATGCCCAATGGTAGCTTAGACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTGTCAGGGATATTGCCACCGGCTTGCACTACGTTCATCACGAGTATGAGCCCAAGGTGCTCCACCGCGACATCAAGGCTAGCAACATCCTGCTTGACTCCACCTTCCGTGCCCGCCTTGGTGACTTTGGTCTCGCCTGCACCGTCGCCGTCGGCCGGAGCTCCGTCTCGTGTGGTGTCGCAGGAACATTCGGCTACATCGCCCCGGACTACGCAATTAACCTGAAAGCAACGCAGCAGACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCGGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| CDS seq | ATGATGATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAGTATTGTCCCTCTCATCAGTTGGTCATACAACAAAGGAGAGCCCCTACTTATCTATGAGTACATGCCCAATGGTAGCTTAGACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTGTCAGGGATATTGCCACCGGCTTGCACTACGTTCATCACGAGTATGAGCCCAAGGTGCTCCACCGCGACATCAAGGCTAGCAACATCCTGCTTGACTCCACCTTCCGTGCCCGCCTTGGTGACTTTGGTCTCGCCTGCACCGTCGCCGTCGGCCGGAGCTCCGTCTCGTGTGGTGTCGCAGGAACATTCGGCTACATCGCCCCGGACTACGCAATTAACCTGAAAGCAACGCAGCAGACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCGGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| Protein seq | MMMQLLLVIIILSTVMISSSDAYYQSCRCLGDGKNNQTSCDQAIDDSIKGSGQLIFRRIQPPITSVAFNVSFIGSLAFILRPVPAGGEYSNNSDAYGSLVFSGNTYNKTTTIITHSDCCSTGDSSSNVFVKMGALKNVSTFGVNITISRKASNIQIVQGNNYTISVWIDYNRAAEAADRSISVFVAKARETKPKEAIIVNKDDNISKGATLQGCIFSSMDLQRLHQISDMDVTFAYGQHVSHSPSRSLPTILASVLGPAGGAVIAAAVTWLYFNSSYRRWKKDFDQLAKSMQSLPGVPVKISFADIRKATNNFHDTMKLGSGAFGAVYRCKLQSLNLKEQPVEVAVKKFTRADTRSYQDFLAEVSIINRLRHKSIVPLISWSYNKGEPLLIYEYMPNGSLDRHIFARTDQLHGGHHTTIRQWDTRYNIVRDIATGLHYVHHEYEPKVLHRDIKASNILLDSTFRARLGDFGLACTVAVGRSSVSCGVAGTFGYIAPDYAINLKATQQTDVYAFGVLVLEIVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGEFDIEEARRLLLLGLACSNPNPSDRPTMVVAVQVIAKLAPAPDVPLEKPTVVCFPPLTLPVGSSSSECTDYYVTAKGSLQIKSSMV |
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| Function | Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g06160 | LOC_Os02g06160.1 | Chr02 | 3076495 | 3078826 | + | MSU_osa1r7 | ||
| CDS seq | ATGATGATGCAGCTCCTCCTAGTGATCATCATATTGTCCACAGTGATGATCTCCTCGTCCGATGCTTATTATCAATCATGCAGATGCTTGGGTGATGGCAAGAACAACCAGACTTCCTGTGATCAAGCGATCGACGACTCCATCAAAGGTTCAGGGCAGCTAATTTTTCGACGCATACAGCCGCCGATCACTAGCGTCGCCTTTAATGTGAGCTTCATCGGAAGCCTCGCCTTCATCCTCCGCCCAGTCCCAGCTGGAGGAGAATATAGCAATAATAGCGATGCCTATGGCTCCCTCGTGTTCTCCGGCAACACTTATAATAAAACGACGACGATTATTACTCATTCTGACTGCTGCAGCACTGGCGACAGTAGTTCCAACGTTTTTGTTAAGATGGGTGCATTAAAAAATGTTTCTACCTTTGGTGTAAACATTACAATCTCACGGAAGGCCTCCAATATTCAAATAGTACAAGGGAACAACTACACCATATCTGTATGGATTGATTACAATCGTGCAGCTGAAGCTGCAGATCGCAGCATATCGGTCTTCGTTGCCAAGGCAAGAGAGACGAAACCTAAGGAAGCCATAATCGTCAACAAGGACGACAATATCAGCAAAGGCGCAACCCTGCAAGGCTGCATCTTCTCGTCGATGGACCTGCAACGACTCCATCAGATCAGTGACATGGATGTGACATTCGCCTATGGCCAACATGTTAGCCATAGCCCATCGAGGTCGTTGCCGACCATACTGGCATCAGTTCTCGGACCAGCAGGCGGTGCAGTCATTGCTGCAGCTGTGACATGGTTATACTTCAACTCCTCCTACAGGAGGTGGAAGAAGGACTTCGATCAGCTGGCCAAGTCCATGCAAAGCCTCCCCGGGGTTCCTGTCAAGATCAGCTTCGCCGATATCCGCAAGGCCACCAACAACTTCCATGACACCATGAAGCTGGGCAGCGGCGCATTTGGCGCCGTCTACAGATGCAAGCTCCAGTCCTTGAACTTGAAGGAGCAACCGGTGGAGGTAGCAGTCAAGAAGTTTACACGTGCCGACACCCGGTCCTACCAAGACTTTCTCGCCGAGGTCAGCATCATCAATCGTCTGCGCCACAAGAGTATTGTCCCTCTCATCAGTTGGTCATACAACAAAGGAGAGCCCCTACTTATCTATGAGTACATGCCCAATGGTAGCTTAGACAGGCACATATTCGCTAGAACTGACCAGCTGCATGGTGGCCACCATACAACGATCCGGCAATGGGACACCCGCTACAACATTGTCAGGGATATTGCCACCGGCTTGCACTACGTTCATCACGAGTATGAGCCCAAGGTGCTCCACCGCGACATCAAGGCTAGCAACATCCTGCTTGACTCCACCTTCCGTGCCCGCCTTGGTGACTTTGGTCTCGCCTGCACCGTCGCCGTCGGCCGGAGCTCCGTCTCGTGTGGTGTCGCAGGAACATTCGGCTACATCGCCCCGGACTACGCAATTAACCTGAAAGCAACGCAGCAGACTGACGTCTATGCGTTTGGGGTGCTGGTTCTTGAGATTGTTACTGGCAAGAAGGCGATGCTGAATGACGCACAATTTGGCCATATCACAGATTGGGTCTGGCATCTCCACCAACGGGGGAGGCTCCTTGAAGCTGTAGATGGCGTGCTTGGCACTGCCGGCCATGGTGAGTTCGATATCGAAGAGGCAAGACGCTTGCTTCTTCTAGGCTTGGCGTGCAGCAACCCGAACCCGTCGGACCGGCCAACGATGGTGGTGGCGGTGCAGGTGATTGCAAAATTAGCACCGGCACCGGATGTGCCACTTGAGAAGCCGACTGTTGTGTGCTTTCCTCCTCTAACTTTGCCAGTAGGGTCTTCATCATCTGAATGCACTGATTATTACGTCACGGCAAAGGGTAGTCTGCAGATCAAGAGCTCAATGGTATAG
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| Protein seq | MMMQLLLVIIILSTVMISSSDAYYQSCRCLGDGKNNQTSCDQAIDDSIKGSGQLIFRRIQPPITSVAFNVSFIGSLAFILRPVPAGGEYSNNSDAYGSLVFSGNTYNKTTTIITHSDCCSTGDSSSNVFVKMGALKNVSTFGVNITISRKASNIQIVQGNNYTISVWIDYNRAAEAADRSISVFVAKARETKPKEAIIVNKDDNISKGATLQGCIFSSMDLQRLHQISDMDVTFAYGQHVSHSPSRSLPTILASVLGPAGGAVIAAAVTWLYFNSSYRRWKKDFDQLAKSMQSLPGVPVKISFADIRKATNNFHDTMKLGSGAFGAVYRCKLQSLNLKEQPVEVAVKKFTRADTRSYQDFLAEVSIINRLRHKSIVPLISWSYNKGEPLLIYEYMPNGSLDRHIFARTDQLHGGHHTTIRQWDTRYNIVRDIATGLHYVHHEYEPKVLHRDIKASNILLDSTFRARLGDFGLACTVAVGRSSVSCGVAGTFGYIAPDYAINLKATQQTDVYAFGVLVLEIVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGEFDIEEARRLLLLGLACSNPNPSDRPTMVVAVQVIAKLAPAPDVPLEKPTVVCFPPLTLPVGSSSSECTDYYVTAKGSLQIKSSMV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0156000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0156000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004290 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004490 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004340 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0004230 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004260 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0106300 | SBH | 0.594346 | 1.468509 | 7.325785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004260 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0054200 | RBH | 0.013093 | 2.2930885 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0004850 | SBH | 0.175723 | 3.218766 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0005170 | SBH | 0.000000 | 13.736813 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0007700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006450 | SBH | 0.216768 | 45.047016 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006570 | SBH | 0.000000 | 8.429834 | 4.974110 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006550 | SBH | 0.198622 | 37.790985 | 13.290949 |
