Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_11g0018780 | OGI:11066210 | 4/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:25821710-25834002 | ||||||||
| Gene Symbol | RYMV3, OsRYMV3 | ||||||||||
| DNA seq | tcaacccttggcatggctccttgttgaaacactggaccgcattgaaagatccagagttcaaacactttcaaactatgaaatccatcatcagcaccaatgagcaacttaccttgtactgaaacagatagcttgagggaaagaagagacggcaacctcccaaggaattgtagatcctcctgtggcagtctcaagaacgagatatccaacaccgagaggttcgagagaagcgagggatctctctttatccatgccggcatatcatcaaaaaccccaaatgcgaaaaatctgtgcaaaagtggcgaggggacccaagagttcccaatcaaatttagagtgctgctccggtactttctacttgcagtagaaatcaatctgatccgtagatctagttatatccaagggctcagatctttttatactccacctcaatttatagtagtagaaatgtggaggggcattattgtccaaaggaaaataagcgcttaggggtaaaatagtactttcatctttttcttttaaccctaccccctctacgttgccggccgctcgccctcccctcaatcaaccagcgtcgcgccgcctccttgcttccgccgccactgccactgcctctgccgcttcacttctcgtctggacgagcaccggcctcctcccccaatcgcagccgccgccgcaagcttctcctctcgacagttcatgatgaacagcaacacagctgaagccatcatcaataataagaccaccgccaataagtctgacaccctattattttactgagggctcggagcctcggagagagacgttaattagtgccagtcaggggctctgggctaccgacggaactacaagggcataaggatcggagaaaaagaaatcgcatcaaaacatgagatataggtcgaaaaaggattaatagatggaaaaaaactgcagtggaacgcgttgaaaaaaagaaatctcgtgaaaacatgataatatatggaaacgggacaatagatcggcctgagatgcggtgaatgcgtcgtgcctgatgcgatcaagccaaaattacccctaatcagtccctaccaaaattacccctaatatgtattaggagattactaatctacccttcataataaacggtcaagattaattctacttatagtataatactacaagtaaattgcaccggagcgttggtctcaaatttaaaagaggcgataaagccctcacttctaaagttttgagtttctgcagtttgcacaaagattcaaccagattctccatcaaggtctcatccataccatacgacaaaattgagagctctctcagtccagttagactctgcagctgtttcacaaagtttggggatctgtagaggcaaaccgtggacaacgcttccagtgatgtcaggttcccaatctcatcagggagccttgtgttgtggtgaacatggaggcacatcaattgcctcagctgaataatagtccatggcaattcttcggtatcaattcctgttatgtcgattgtttgcaagaaccggaggtttcctatttccactgggagcttgcctcctttttcagggtaattttttgcaaataaccttagataccttagatgaaataaattcccaacatacctaaggtactgaagttcaaaaccatctatatccagtacacgcaaaacgtggaagcttgaaagaggtggcagcagattaatagcaggtctgaagacagtgacagacctcacttgtgacaagttcatggtaacctgaggcatgctggccacactactttggagggccagtctgcgaaccttactttgcaaagatgtttttttgttgaatatcatcgtatatagtaacaaagttatctccacttgacaattgaagtacgagatcaagcaccatatcatgtacacagcccttccttccatgtcgatgtctattggctcgatcgagcttctatttatgagttcattgaagtaactctctcccagctcaaaatggcttgtttcatgcttttcacgttgcacaaaaccttcagctatccacctccatatcaattggtctctcggaatctcataatcttctagaaatatgcttagatataataaacatgctttcatatgaggaggtaaatcataataactaaaggacattatcctttgcatcttctccacactgtcaccttctgcgagtccatggccaatagaattgagcaaagcatgccattgatcacttgttttgatcctcttagtacttgacaaaaggctagcaatagtaatgatggctaatggtaccccaccacatttcttcaagatatttcgagatacttgttcaagttcatggggacatttattctcgtgcaaaaatattcttttgtagaaaagccttttggagtccgcatcagaaagatgtttcattttataactcatatcatcagaggaagagcagcatgcttgggagacactgattttgcgggttgtagtgattaatcgactacccagctggtttgaagtgaatgcatacttaataaatccccaaaacttttcatcccatatgtcatcaattatgatgaggtacctataaaatttgttagcgttagccggcaagacagtcaagatatatcaattctattggctcggcaaaaaataatgcaccctagaggaccactgaataaaaattaaggtagaaaacgtggattgttttgttggctagcatgtcttatgaaagaaaaagggtcagctagcatgcggtgattgttagctcatttaggctgtgttccttacttggggtttgggaacccatctccccgcacggaaaacagagcagttcattagcgcgtgattaattaagtattagctttttttttcaaaaatggattaatttgattttttaagcaaactttcatatataaacttttttaaaaaaaacacaccgtttacctgctttaaaagtgtgcgcgcggaaaacgaaagagaggggttgggaagtagaagttccgtacacagccttagtatcattaatagatatgttgtataactaacaattactccctctgtaaatataaggtttattagttttttatactatctccaatcaatattatgcttttgaatattgatttcttaatttcataatataatatcatcaataattaggaaattaacatcatatgaagtatttttagacacgaatttagtgatactacatgcatgacacagctgcgtgctagcatgtggtggttgttagttcatttagtttgattaataatagatatgttgtataactgacaattactcgttgtgtaaatataaggtttgttactttgtatatacactgttaccaatcaatattatactttgaatattgattttttttccataatataatatcatcaataactaggaaattacactactatagaaaagggattcggtgccggttgggaaacccccttcagtgccggttttcccaaccggcaccaaggaggccgcattgatttgaaaattaccttttaggtttgacgaataaaaaaaaaaagccggctccctcctcccacattggcaataacagaacgaacacgaaaaaaatttggcaatattcatcccacaacattcaaagatggatgtggggacacccaatttatgcttggtgccccgaaagtcaactcgtgattgtccaggatttcgatcacgcacagattgatatacagaacagctctcgattaattatacaaatttgttcatgcaaactaattatacaactgttaatggttttaaagatccaaactattacaaccttatttgaaagtacaaagaaaaacccaaagctactaaacttcacaggcatagcttgagtatagactaagcctagaaaaactcatcgttgtagtaggcctcgctaccttctgggacttcttcataacacggttcttctatatgttaaataatgcaagaatgagtacttatctacttagcaagacacttataaatatgttatgaacataatcatggaaatttaaatatgatccttctaagcataagatattaaaataaagagaaagtaaatataacaacaaattctcattatctttaccactattttatgtttaaaactacttatacgtcaggagtaggaatcacccttatgacacaactccagaaccgggagtatggcacattcgaatgatttaattcacctctgcagagactgtccagctttacccacacgatgtcaacagtttgcaaggctgaggacaccagagccgttcgaaggtcccacttattactagttactgcacgagtgggatattgatccgtcctagcagtcgggcacttgttgggcctaagcaaggctacatggtcgctgctttcacaggttccaccgttgtgaaccatgcccccaacctccttacacatgcgttcaccccaatcctgctcctagtgagccaaccaacagtctttcatatagtgggacaatgtactaggttaagtccaattacttgatcgtgtggatggacgcaactatgtcatttccatggtataagggggtaattataatccagttaaaccacccaaaactttccaaactccccacaccaacaaacttcattatatatcaacattcataaatgcccattttaaccgaattcctaagttcgtaaagatgtttgaatagtaaaccacataaaatgatgtccaatacattcttttaataacctcacgtaacaatgctagaaagcattaataattaccacaatgttattctgaagtataacatctacccatgagatgttaaaagagtaaatatcatgcatcaaatttaaatatgaagattatatcaaggtttctatatgatcaaaattttagttgtcttgccttgcgcctcgaaatcttcaggggcaccagcgtagccggctgggtctacgtcagctcctgtgatgttaatgggatcttctgaattgtctaacatacgtatacgtaaaagatagcaaataaaacctataagggaaagtactacagataaacggtaaaataaaagaaaataacaaaattggagcatgaagagaggcaaagtcaaaaggtcaaaagatatttgaattttgaaagaaaacggtgtcggtttctataggttggaacaaaattgaaggaataggaaaattggatgagtggggtttatttggtggatttgtttttctagtcgaaggaataggaaagctcaaaattgaaggaataggaaaacagccgtgagtggcagcagagcggttaggatcgcacaaagctcaagagctattgtgatgcgtgctgtggaactcgacagagtagtgaggttccgaccactgtatgcgtcgaggcgtggggtgcgaagagtgatatttcgaccttaggattaggttgtgccgggttttacgaccaacggtttgacgtcggggtttgagaccaagcggacgtctacatagaaggcgtaaagtttcttcaccggctgtttagtagctgtgggatgaaatagttgaaggtttagaaataaaaatggtatttaagtaaatcaaaggaattttaattcaaaaaggggttttaaagaaataaaatttaagaatggtattttaaaataaagaaaagggcatttaaagaaattaaaggataatttaattttaaaaaggtttttaaaataaaataagaaatttaaaattaaagggatataaagtaaatcaaataagtttaaaataatttttaaaggttaattaaaataatttagaattagaaagtaaataaataaggaaaatgggtatttaaataaagaaatttaaataaaatttttaaaatagaaaatttggtatcaaaataaagggtttgaaattagatgaatttaggtcaaagaatttttggaattggatcaatggttggagagatatggatctctaaagaatggaatttgaaataaatcaaataaaagtagaagggttactgtagaagtggggcccgcttgtcagctctttcttccttctctatttcttttcttcctcttctccttgcggcacagatggaagggagagagggccgagcagaggagggtgtggggaggaagagcagctccgacgcctggcgctcgtcgacaacggcgacagcagcagcggctggtggcggccagcagggctagggtggcggccggctgtggagagcaaaggaaagcgacggccggtggtggaggattggagaaagggagagagagagagagagagagagagagctccgatttttgtgatggaaatggaggggttcgtcggtttatataggaggcaaaggcggtggaggagagatggtcgacgaaggcacggctcggcgttgagaagaaatggaggtggcggcgccgaatgtcagcttgtgattggacggagaatgggtggctcgatgtcggcaataagtcgaggcgacgcgcgtccgaggcggctcggtggtcgatgacggcatgcggcgatgggtcgcgcgacggcggtggagaggacagtgggcgacggcaaggtggcggcgacggattggcgcggcaaggcggcggcggcggattggttgggcggcggcggcgcctagttgcggcggtggcggcggcggcacaaatgaaggaggagggaggccatatagacttttgtcaattgggccgaatgaagggacttcggcccaaactaaataggagcctttggcaatttgcaaatagatttgaaatagaattcaaaggagatggaatttgaggagataaatttaaggactttttgaacttgacaaggaaatttaaaatagggcttttaggttactaaaaggatttgaaaatttttgaaatagaaacacaacctaattaattagagatataaatctgaaaggataaaaataggaaatgctccaatgtaaaaagaatcaaaaggaaaacttgtcgcgaaaaattttctccaaaaaatttaagatttttgagtatgttacaatggattcatccacatatcaaattttggcaacattcatcccacaacacaaattttggcacttaaatttatgcaataaaaaaatcacacctcttcagatccgccatcgtcgccgttgcacgattggtcgtcttcgagccatcgtgccacctcccgtcgcgccgtctctcgtcggcgagcccgccgccgtgtctccttcgcgagcccgccacctgccgccaccaacccccggcaagcccgccgcccctgccgccgcctccactcccaccagatctggcggaggggagggctcctccccgccggcgagccctcctcccccccctcttgaagcccgccacctaccctcagcgagcccgccgcccctgccgacgccgaatccggccaccccgcccgccgccgatcccgccagacctgcctaccgcaagcccgcccgccgttgacgcctcccttcccaccggatctagttgaggggagggcgcggtcgccactgccgcctccgcctccgtctccgccggccagccaccggcagcgagagagaagggagggagacagagagaagagagagagaaccttatctccttgcgtcacctcgtcatggtggggcccgccggtcggctcatccaattgctggctcgactcgatttctgtgggtgtcggttttttaaaaaaaactggcacctataattgctttgtgccggttttttgcgatttcaacccgcagaaatgggaaaaggcctgtaggtgcttgtttagcacttctgacacctataatgccgacacctatttgatgttttgtaatagtgttaacatcatatgaaatattttgaaacacaaatttagtgatatactacatgcatgcatgacactaaattaacgtattttaattcgatcagctattagttgaaattttcaaatattaattttcctgaaaatatggatggcttatattttattttttgtatggacggttatgagcatctgttctagcattaagttttggcagtgatgatacataccttttaccctcaaggaaccttcttagttcatcaatgagttgaacctcatcccttccaacttcgttgatatttgcatactttcctttgtcaagttcatagagcatcttcttgaaaatctttattatgtcaggatttcgagaaactgaaacaaaagcagtgcaatcaaattgcacttttatcctgtcatacactgctttgacaagagttgtcttgcccagcccaccaaatccataaattgtgatcgtcctcaatcgttgcttggacccttgtaacgccccgattttcgttcgggattaaaattcatttaataatgtattttctagaaatgtaataaaaattgaatcaacttaatcaagtgaattattgaggaaattaaaaatttcctttaaaaattattggccggtaatattttgtaatattctctgtgccctaatatactctccggatttttccgtgaattttcggagctcaagaagtgattttaacatcacaaagtgcatttaacaaatcaaataaaagagaaaacaaattaatccctccccttttctccccctgggcccggcccaatccccccctccctccttctttcccctccggcccagcccggctcgcccctctctccctaagtccacataaccccctcccccggcttcctctctccttccctcgccgacaggtggacccgaggccccacctgtcagctcctcccccttcctccagccaccttgccagtaaccacccgtggccgccattgccgcccactccgccgcaaaatccgcaccaccccgcccctcccgctcgcgcccaagtggtggaactgcacccccaccacctcctccaccgtttcccccatttccccccaagaaaacggcgccggtttgccccgccatgagctccacgtcgacaccccgcttcccgccggttgccgccccaaatccacctcgctccggctctctcccaccctctcgaggctataaaaacgatccccgtgctctcctctcccatttccccaactttcccgggcccgtcgcgccttctcctgctctccccgcgcgagcccgagctccgccgctcgtcgccgtgcttccagccgcacgccaccgccgctccagtcgccgccgcgctgcgccgccaccatcattggaatcaccgtgccgtgccgcaccccggcccctactccttttcccctctccgcctccgaaacaccaccgcaccgcgcgcccgagccccgccgcccgccggcgccctccagccggccgccaccgtcactcccgccgctgctgctccgcgcaaccgtcaccgacggcttcgttgcgtcgtcccgtaccccggcatcccctccgctcctccattccgccgctggaaccgtcacaccaccacaccacccgaaccgccatcatagcagccgcctccggctgccactcgccgccgctccaaaccatttccggcctcacgtcctcctccagtggcatcgcagcgtcgataggaagcccggcgttcccctcatctgagctccccgacgccgatgcccgttcccgccgcgcgaggtcgcggccaccctcgtccgcttcctcctaggcgccgcttgtcgccggagcagcgccgccatccttcgcccgagctccgccggccgccttccgtcatcgtcccgtcgccggcgctcctcggtgaggaccccctccgtctcctctccctttccccttttttcgccgcctcccgcgcgtgccgtcgcgctggtggtcgtcgccggcgaccatcgggccgtgcgccgtcgctcccggccggccgaccggtgagccggctcccgctcgcccgtggccgcccgatcccccttcggggcgatctgggccgtccacgtggccttcccgtgccgcccgcgtcggtgcctctgtggcgccacgtcggcaccacctccgctagccgtacgtcgtggccgccacgtgtctgccacgtggtgcgcccgcggaccagcgcgtgcgtggactcggtccacggtgcgcccgccacccgtgagtcaccgataggtggggcccgcttgccggcgccacctctcccccgtcggatgacgtcataattaatttaaattgcgcaataaatcggtaataattctataaattcattaaaatggctcaaaaccttctaaaattcatatctaattcattcgaactccaaattgagccattcaacttacaaaattcatctaaaattaagatctacatgtttgtttactttttatgtactattttcttggtttttattagagtttttcctcgttttgcgtgccagcgtgtagaatccattgtttcggaagtccgcggtcgcgaggaaaagagttcggaagattgttttgaagaagcaaggcaagtcacacattccccttgagcatgttgatcccaatttataaatattttaccgtttgcaaataaacatgcatgtcttgctaattacatgggattcgggtattacctatctgcttgcgtgtgccatgtttacttgatatctgtcctttgtcaaccttgggtaataaatcgactagctcatgttacttatgtgacctagctagaactgtatgcttagccatgcttaattaccactagctcagttgatgggataattacagtattagacctttttagtatcagaatgagctgcgtgctcgagacatctggccatgcttcatggtcgtaattatccaaataaaatgcgactaaatggtgggctgtgggtgcatggttttgctagtcgcacccatggcaattaaggaccggttcgcgggaaaccctggaagaattcctcgtgcttaccacaagccagcgtgggcaacggctgggcttgtagtgtagctttcctctagccgacgcatccaggcaagggtgggcgtgatggagtttggatgggccccgcgacggcctatgcggcttccggattcacctagccacgagaggggactgcccgctgccttgtgaggagtgggggtgaaacctgaggtgtggtgtgcttggttagaggggttatgcgaagggtcctgtcacggcctctttccggtatgtcgtggtggcatgccggcacacggaaacgtgtcgtggggctgtgtcttgtgggtacagttgtacacctctgatcagagtaaaactattcgaatagccgtgcccgcggttatgggcggtcgaccagattcaccgtgattagtcccaccttaataaatcgacccaatgcactgtagttcaggtgggttggttgagcctgttcaacgtggtgtagcgttgatcagtggagatttaatgttactttaattactcaactgttttactgttttgcttaataaaatgctttacaaccgcttttatgcaaatagccacaaaccgtccttgtgttccccttgcacgtctgcatcattggtgtggcttgctgaatacggtggttgtactcagccttgctattattcccccttttcagaagtgtagtgcttctgagttgaagatgaagttagagcaccaaggctcagaccccagttgagttttgcctgtggagtggagctgaagccccgctaggatcgtctttttctgctgctgtcgttctcttttgatgcgaggactaagagcctcttctgtaagtattttacgcttcatttacgtttggaactgtatattacttgtcgctttgtataccctggctggtcctggacagggatttaatacacaaaatagtctggaaatttgggctaaatttctgggcgtgacaacccttcatccccatcgaatagcctctcgattagctcgtccattggttgctcaatgccaacgagttccgtcacatccttgtatagagcaatcacatgagggtcaatggcaccaccgacgacgttgccaccacacatctcaagttcgtacctttgacgcagctctgctagctgcttaacgagctcctgggcttcttctatggcactggcaatctgatggagatccttgccctttctaaacaagcttgtggtcttcttaaggaacttggtgactctattctttaggttggtgcctgcatctgcatcaggcctagggcccttctccacacgcaccatgaagacatcgatgacgtcctccatgtcgtaggacagctccctcaccttgcctgcccaaatcctgacctgctcgtcgagctggtcaagtggcacactgtccaccttgtggatggcggcatgcttcatagtcagctcggtctcaatagacctgatgcctttcctcactttcttttccagtctaaactcatccttgagcagctcaccgagcttgccgaggagaggacccattgcccctgccacgacctccat
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| CDS seq | atggaggtcgtggcaggggcaatgggtcctctcctcggcaagctcggtgagctgctcaaggatgagtttagactggaaaagaaagtgaggaaaggcatcaggtctattgagaccgagctgactatgaagcatgccgccatccacaaggtggacagtgtgccacttgaccagctcgacgagcaggtcaggatttgggcaggcaaggtgagggagctgtcctacgacatggaggacgtcatcgatgtcttcatggtgcgtgtggagaagggccctaggcctgatgcagatgcaggcaccaacctaaagaatagagtcaccaagttccttaagaagaccacaagcttgtttagaaagggcaaggatctccatcagattgccagtgccatagaagaagcccaggagctcgttaagcagctagcagagctgcgtcaaaggtacgaacttgagatgtgtggtggcaacgtcgtcggtgtttctcgaaatcctgacataataaagattttcaagaagatgctctatgaacttgacaaaggaaagtatgcaaatatcaacgaagttggaagggatgaggttcaactcattgatgaactaagaaggttccttgagggtaaaaggtacctcatcataattgatgacatatgggatgaaaagttttggggatttattaagtatgcattcacttcaaaccagctgggtagtcgattaatcactacaacccgcaaaatcagtgtctcccaagcatgctgctcttcctctgatgatatgagttataaaatgaaacatctttctgatgcggactccaaaaggcttttctacaaaagaatatttttgcacgagaataaatgtccccatgaacttgaacaagtatctcgaaatatcttgaagaaatgtggtggggtaccattagccatcattactattgctagccttttgtcaagtactaagaggatcaaaacaagtgatcaatggcatgctttgctcaattctattggccatggactcgcagaaggtgacagtgtggagaagatgcaaaggataatgtcctttagttattatgatttacctcctcatatgaaagcatgtttattatatctaagcatatttctagaagattatgagattccgagagaccaattgatatggaggtggatagctgaaggttttgtgcaacgtgaaaagcatgaaacaagccattttgagctgggagagagttacttcaatgaactcataaatagaagctcgatcgagccaatagacatcgacatggaaggaagggctgtgtacatgatatggtgcttgatctcgtacttcaattgtcaagtggagataactttgttactatatacgatgatattcaacaaaaaaacatctttgcaaagtaaggttcgcagactggccctccaaagtagtgtggccagcatgcctcaggttaccatgaacttgtcacaagtgaggtctgtcactgtcttcagacctgctattaatctgctgccacctctttcaagcttccacgttttgcgtgtactggatatagatggttttgaacttcagtaccttaggtatgttgggaatttatttcatctaaggtatctaaggttatttgcaaaaaattaccctgaaaaaggaggcaagctcccagtggaaataggaaacctccggttcttgcaaacaatcgacataacaggaattgataccgaagaattgccatggactattattcagctgaggcaattgatgtgcctccatgttcaccacaacacaaggctccctgatgagattgggaacctgacatcactggaagcgttgtccacggtttgcctctacagatccccaaactttgtgaaacagctgcagagtctaactggactgagagagctctcaattttgtcgtatgagagatccctcgcttctctcgaacctctcggtgttggatatctcgttcttgagactgccacaggaggatctacaattccttgggaggttgccgtctcttctttccctcaagctatctgtttcagtacaagtgtttcaacaaggagccatgccaagggttga
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| Protein seq | MEVVAGAMGPLLGKLGELLKDEFRLEKKVRKGIRSIETELTMKHAAIHKVDSVPLDQLDEQVRIWAGKVRELSYDMEDVIDVFMVRVEKGPRPDADAGTNLKNRVTKFLKKTTSLFRKGKDLHQIASAIEEAQELVKQLAELRQRYELEMCGGNVVGVSRNPDIIKIFKKMLYELDKGKYANINEVGRDEVQLIDELRRFLEGKRYLIIIDDIWDEKFWGFIKYAFTSNQLGSRLITTTRKISVSQACCSSSDDMSYKMKHLSDADSKRLFYKRIFLHENKCPHELEQVSRNILKKCGGVPLAIITIASLLSSTKRIKTSDQWHALLNSIGHGLAEGDSVEKMQRIMSFSYYDLPPHMKACLLYLSIFLEDYEIPRDQLIWRWIAEGFVQREKHETSHFELGESYFNELINRSSIEPIDIDMEGRAVYMIWCLISYFNCQVEITLLLYTMIFNKKTSLQSKVRRLALQSSVASMPQVTMNLSQVRSVTVFRPAINLLPPLSSFHVLRVLDIDGFELQYLRYVGNLFHLRYLRLFAKNYPEKGGKLPVEIGNLRFLQTIDITGIDTEELPWTIIQLRQLMCLHVHHNTRLPDEIGNLTSLEALSTVCLYRSPNFVKQLQSLTGLRELSILSYERSLASLEPLGVGYLVLETATGGSTIPWEVAVSSFPQAICFSTSVSTRSHAKG |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0018780 | OsLiXu_11g0018780.01 | Chr11 | 25821710 | 25834002 | - | NAM | ||
| CDS seq | atggaggtcgtggcaggggcaatgggtcctctcctcggcaagctcggtgagctgctcaaggatgagtttagactggaaaagaaagtgaggaaaggcatcaggtctattgagaccgagctgactatgaagcatgccgccatccacaaggtggacagtgtgccacttgaccagctcgacgagcaggtcaggatttgggcaggcaaggtgagggagctgtcctacgacatggaggacgtcatcgatgtcttcatggtgcgtgtggagaagggccctaggcctgatgcagatgcaggcaccaacctaaagaatagagtcaccaagttccttaagaagaccacaagcttgtttagaaagggcaaggatctccatcagattgccagtgccatagaagaagcccaggagctcgttaagcagctagcagagctgcgtcaaaggtacgaacttgagatgtgtggtggcaacgtcgtcggtgtttctcgaaatcctgacataataaagattttcaagaagatgctctatgaacttgacaaaggaaagtatgcaaatatcaacgaagttggaagggatgaggttcaactcattgatgaactaagaaggttccttgagggtaaaaggtacctcatcataattgatgacatatgggatgaaaagttttggggatttattaagtatgcattcacttcaaaccagctgggtagtcgattaatcactacaacccgcaaaatcagtgtctcccaagcatgctgctcttcctctgatgatatgagttataaaatgaaacatctttctgatgcggactccaaaaggcttttctacaaaagaatatttttgcacgagaataaatgtccccatgaacttgaacaagtatctcgaaatatcttgaagaaatgtggtggggtaccattagccatcattactattgctagccttttgtcaagtactaagaggatcaaaacaagtgatcaatggcatgctttgctcaattctattggccatggactcgcagaaggtgacagtgtggagaagatgcaaaggataatgtcctttagttattatgatttacctcctcatatgaaagcatgtttattatatctaagcatatttctagaagattatgagattccgagagaccaattgatatggaggtggatagctgaaggttttgtgcaacgtgaaaagcatgaaacaagccattttgagctgggagagagttacttcaatgaactcataaatagaagctcgatcgagccaatagacatcgacatggaaggaagggctgtgtacatgatatggtgcttgatctcgtacttcaattgtcaagtggagataactttgttactatatacgatgatattcaacaaaaaaacatctttgcaaagtaaggttcgcagactggccctccaaagtagtgtggccagcatgcctcaggttaccatgaacttgtcacaagtgaggtctgtcactgtcttcagacctgctattaatctgctgccacctctttcaagcttccacgttttgcgtgtactggatatagatggttttgaacttcagtaccttaggtatgttgggaatttatttcatctaaggtatctaaggttatttgcaaaaaattaccctgaaaaaggaggcaagctcccagtggaaataggaaacctccggttcttgcaaacaatcgacataacaggaattgataccgaagaattgccatggactattattcagctgaggcaattgatgtgcctccatgttcaccacaacacaaggctccctgatgagattgggaacctgacatcactggaagcgttgtccacggtttgcctctacagatccccaaactttgtgaaacagctgcagagtctaactggactgagagagctctcaattttgtcgtatgagagatccctcgcttctctcgaacctctcggtgttggatatctcgttcttgagactgccacaggaggatctacaattccttgggaggttgccgtctcttctttccctcaagctatctgtttcagtacaagtgtttcaacaaggagccatgccaagggttga
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| Protein seq | MEVVAGAMGPLLGKLGELLKDEFRLEKKVRKGIRSIETELTMKHAAIHKVDSVPLDQLDEQVRIWAGKVRELSYDMEDVIDVFMVRVEKGPRPDADAGTNLKNRVTKFLKKTTSLFRKGKDLHQIASAIEEAQELVKQLAELRQRYELEMCGGNVVGVSRNPDIIKIFKKMLYELDKGKYANINEVGRDEVQLIDELRRFLEGKRYLIIIDDIWDEKFWGFIKYAFTSNQLGSRLITTTRKISVSQACCSSSDDMSYKMKHLSDADSKRLFYKRIFLHENKCPHELEQVSRNILKKCGGVPLAIITIASLLSSTKRIKTSDQWHALLNSIGHGLAEGDSVEKMQRIMSFSYYDLPPHMKACLLYLSIFLEDYEIPRDQLIWRWIAEGFVQREKHETSHFELGESYFNELINRSSIEPIDIDMEGRAVYMIWCLISYFNCQVEITLLLYTMIFNKKTSLQSKVRRLALQSSVASMPQVTMNLSQVRSVTVFRPAINLLPPLSSFHVLRVLDIDGFELQYLRYVGNLFHLRYLRLFAKNYPEKGGKLPVEIGNLRFLQTIDITGIDTEELPWTIIQLRQLMCLHVHHNTRLPDEIGNLTSLEALSTVCLYRSPNFVKQLQSLTGLRELSILSYERSLASLEPLGVGYLVLETATGGSTIPWEVAVSSFPQAICFSTSVSTRSHAKG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0700100 | SBH | 0.0 | 0.0 | 0.474086 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g43700 | SBH | 0.338432 | 0.094341 | 0.064541 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0700100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022600 | SBH | 0.142832 | 0.0 | 0.795712 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022650 | SBH | 0.107532 | 1.313498 | 0.726294 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022380 | SBH | 0.469252 | 1.244121 | 1.933624 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021910 | SBH | 0.000000 | 0.117333 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019110 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0349100 | RBH | 0.1837835 | 0.667904 | 0.4400575 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0019280 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0362000 | SBH | 0 | 0 | 0.0127895 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017280 | SBH | 0.175401 | 0.176676 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017300 | SBH | 0.148575 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016820 | SBH | 1.712640 | 14.700884 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0018770 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0018920 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016800 | SBH | 0.113983 | 2.011609 | 0.791362 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0019380 | RBH | 0.0 | 0.0 | 0.0 |
