Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0015610 | OGI:10048420 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:21057555-21070007 | ||||||||
| Gene Symbol | PPR454, PPR10, PPR2, Rf4, Rf-4, PPR782a, PPR9, PPR3, PPR794, PPR6, PPR6-794, PPR5, Rf5, Rf1a, PPR11 | ||||||||||
| DNA seq | ctacgatattcttgatatttgctcccagacgattggggaagattctaacaagaaggaagcagtggatgcttcgagggagaagtgcttctcatcaatcatgaacaggtaagtgccagccctggttatatcacccctctgtaacagtttcctaacaatggaatttagcatgcgggagtcggcggaacagccattctcctccattgaaagaaatagatcatccaattcttctagcgacccctgctctataagattttctgccattaaactgtaggtccaaacatctggcactaaaccgttagccgagtgagcagcaaacaaatccttagcttcatccattcttccacatttaagtaaggcaccaatcataatgttaaaagtcctagtctccagctgtaaatccgtcaaacataggttctgaaacattcgaagtgcctcgtcagtgagattgtttttgcaaagtccatgaaggattatgttgtacgtgctaagttcaagctgtgttccacttttggtaatactgacatagagttcttttgcagcagcagttcttctggtatgaaataaaccttgcagaattatgttatacgtaataatattaggactaacaccactgctcaccatctctttgaaaagagctaatgcgtcatccatcctgctaactctacagtagccattaatcaaggtgccataggtaacaatattaggtttcaccccaactgagaccatgctggcaagtaacttcgttgcttcatccatcttaccagctaagcagcatccatcgataagagtactgtacgtaatgacattgggcttcacaccaatacgtaccatcaggtcaaaaagtttttcagattctataaccctcccttctttgcaaagattgctaattattgaactaaagaaaacagtgttcggacagatgccactgtccaacattttaaaaaataactcttcagccttctcccacttgtcataggtgcacagaccatgaattagggaggtatacacaataatgttagggGttagtccttcatcgatcatctgctcaaaataaagcatagcatcatctacactgcctgacttgcaaagtacatctataactgttccataggtcactacattcagattcaatccatgctgcctcattttgctgaatacaagcattgcctgatctactttctcttgtttagcgtatgcacatattagaatgttgaatacatgatgatccggttggataccatttcgtaccatcaaatccaagagagcatgcatctcaacaagggctcctttggtagcatacccctgaagcagggtaccataggtagcaatatcaggctctaggcccctcttggtcatagaatcgaaaatctttctagcttcggtggatcttccattcttgcaaagataatccatgagcgagctataagtaacaacatctggttcgacaccatcactgcgcatctttttgagtgttccaatagcctcttttggctgccctgaagagcaatatccatgcagaatactattatatgtcatgcaatcaggcatgacaccattcttaaccatggtgttaagtacctccatggctttgtccatagcttgagccttgcataacgcagcaatagtagagttgtaggtcacaacatttggtgaaatcccccgatcaagcatttcatggtatgtactgtatgctttgtccagatccccctctttgaagaatccattgatgacagtggtatacgacaccacatcaggtgggctacctcctcctcgatcatcagccatcatgtgcagcagctcgagagcttcttggcttctgttctcatcacacagcccgttgagaagaatattgtaggagaagacatttggtatgcatccgagctcggtcattctgcggagcactatgtccattgcgtcgctcgtcctcttgtcggcacagaggcccttgagcagaggagtgaaggtgatggcttccactctaaatcccttcttgacgacattgcccaaggccgcgaaaccgaggtccaagcggcccgcacggcagcagcagccgatgaggatggcataggtgggcacggtgggagttaccttgccggcgccggctcgggccatgcggttgtagcaggacacggcggccgcggggctgtgacgcgcgacgtcggcgagggcgcggttcaagccgtagatcgaggcgcccctgccacgccggagcaattcgtcgaacacgtggcgtgcgtcctcggcgccactgccccccgcgcggcctcctcgcccttggatcgagccctccgagcgtgggacgccgccgccgccaccgccgcgcgggcgggtagggacgcggcgcgccatgcctgcccccgagggcgccaggcctgacggacagcggcgaacagatcagcgccgccgcgggcgccaggggaagggaggggtgccctcacgtttgatgctcgagtgagggcaatgcttttatccctcgctcccatgttacagtactaacattgagggggtgtttgcatagcaagggtgagttctatttctccaacttcaacttcaacttcctcgttttccgttagcacgttcttcaaactattaaatggtgtatttttttaaaaaaaatatctatataaaagttgttttaaaaaagaaaataaatctattttttaaaatttgtctctagtagttcacatcaaacggggcctaaattttagtccttgtcactttagaaatttaggcgctaattaagagtattaaacatagactaataataaaactaattgtataaatgaaagctaattagcgagacgaatcttttaaatttaattaatccataattagcatatgtttactgtagcatcaccccctgactatatatcctccctccgtttcacgttatatgatgttttccaggtggtgtttagatctagggactaaaaattagtccctgtcacatcggatgtttcgacactaattagaagtattaaacgtatactaatgacaaaacccattccatgattctggactaattcgtgagaggaacctattgagactaattaatccatgatttgcctaatcaatgttatagtaaacatgtgctaattgtggattaattaggcttaaaaaatttgtcttgtggattagctctcatttatgcaattagttttattattagtctatgtttaatactctaaattaatgtccaaacatccgatatgtcagagacaaaaaaaattagtccctcgatccaaacacatatagtctctccgtctcaaaataaaccaacttctaaagtttaaaatttgttccaaaataaacaatttctaacttcttacctaccatccatccgtaaaatcgaaaagttttatatcttcaatatcccccacctacccacccatcaatataactttgctattaattaggggtactttgatcctttgtttatccacttatatccacattggactttttgtgagacagagagagtacaatataagagattttaaaggaatgtgacacattctagtactacgaatttagatagtgtccagattcgtagtaatgcgatatgtcatatcctctaaaatcccttgtattatgtgatagaggaagtgtaaaacatatgcataaatccacacgtaaatctattcaaaactcaacacgatttatagtgtgaaataggggaagtaaaaaagaatacaccagtattaacaaacattttcattaaatctataattaaaatagctcttaataacatatttattttagtattgcaacgttaaatcagttattaaatccataattaaaataggtcatgagaatgtatttattttgtattataaatgttaatatatttttctataaacgtgatgtaaaaaccttgttatatttagaacagagggagtacctagcaaaatcacatatttttgtggatcattctctattatttttgtaagtatcctcctttcagttattgtgcagtttgtaccttcaatatccctttgacatccttcgcggaaaaacgtcaggatggtgttcactgacaagtagtacaaaatttggcaagagagagaaatactgctcaacaatggcacatattaatggggattgcaggcgcgtggcctgtatatatcatattcaacattattaatacggaccaaatgatacaggctattgtctaaccaacctgacaccaatcgatattacaccacctcactttgtaagcagtacaccataaaacgtaattcacatatgcgcagtctgaagaaaaataaaaagaggcacacaaacatgttctgccacatcccaaaaccatctctcattgaggcctgtagtagctgctctggtgaggagggtaagaaccctgggcattgtacggtggctgaggatatggcggctgtggctgcggctggggctgatgtggattgtagtactgcccgcgccatcctccaggatatgcttgttggccatagtcatggttgggaggttgctggtgtggtggctgttggtagtgaccagggtggggcgcgccataaggaggctgttgcgacggcgcaccatatggaggctgttgcggtggcgcgccatagggcgggtatggctgtgagtaagcaggtctttgctcgggctgagagtacacgggtctcgaatcgcctgcgggtggaacaccatatgggccctgagcatggggagcatgcgacgacggtggtggtggtgatggactgttctgatctggtggcacagaagtgttcctctgcatgcttgcttggctggaagaagatgagaagctgaaacctgctagcttcttctgcacatcttcgatcatttcacggcattgaatgtttcgggtcattatgaagtcactgcactgctgctttattttgccaattgcttcctgcacaaaaggaccatttcaggatataaatacatacacagtggtcctcctacatacaatggtaactgtcatcatatatatcctaactacagtagaaacagaatgcaacagagacacgcatttacctgtaatgtcacataaaaattgaggccttcattaatgttcttcttaatatctcggtatttagcaacagccgcagcaatttgcttgtaacatctctcacgagcaactgaaaacatgcttcacaaatcaggcctacacagctcattgcttacaaaccgggatacatacttaaaaacactgattgtggtactatttacatgataaaatgattgtaagttagaattaaagagaccaagttccagcatcaatggttcttcatatcttaaattgaactagaactaggaggaaaaaatgtattcaacgaagaaaaataattgaatggttaacagagaaaaacacatgcatacaaacaacacaacattctgttgttttagctagcagacaatttgatgactaggtatgtgtatatataagttcccaaccttattggtaagtgtaacacaaataattatcccacatccaaatcagtagttgctaccaagaatgggcaaaaatccagctatcaaagtcactaagcgcacgatataatccattgatgaataaatcagaagggatacctttgtaatcctctaggttgaacaccgcagcaaactgttcattttgtgcctgtgcagaaatccaaaatataaatagtgttagacataaggacgaaagaacatgaaatacagtatacttaactcttcaaaatattttctggttgttctttctttgctaataccaactaaatcattgatgctattagacgtttaaaattttcaacataattacattttttgggggatgtctatctagattttagcagaaaggtgtttacattgaacttctagaataagagaattgcaaaggtggactatatcaatctttatcaggaatggtggcttacctgtatttgtagcagcagttgttcttgcgccacaatgttatcagctatctcagcacagacaggatcatactttgaaatctccttcttaaaaagatcatcgtgtgatccaacaccggccatcaatttagggagtatgtcatcctgatagaaatatttgtatgtcataattcctgattgactctgctcaaatccctaagctgctgcaactccgcttccaatccagcagggcctccgcttatctgaacagcctcaacgtcttccttcaaatctaaaggtaaggtgatattaccttccaatgaaagaatggaatcgggcaagtccatttccttcaacctaactctagtgatctcactagcttgctgtaatttctccgcttgaatcctgatgatgttatctaccatctcagtgtacttggaaagtgctttcatgcttccatcaggcacaagtgatgaaaaaagcctctctttgctagcatctagaacttcagccaaagatgtaggctttacaagtgatgctgcagggagcgagccaagagaactagcatccggaaccctcatcaggtaaacacggtcattctctttcatagccctctccaagttggtcttcatattactctccagcttattaacagaatcaagaagtggggcagcaactcccctggccaccttcttggcatctgccaaagcgctaattccaatcttcagacgtgcaatttcctgtgcaatttcttctttctcgtgaagatccaaagaacacctatagcaagcatcagcatagaactgagctgccttcagctggacatgagaaacccatgtcttatcaaagtgttgactgagaggagctgcgctaagagctgcataggcttcttcatagaatatgcccacctgaaaaagggacatccacaaatcaatccaatagcacatctgacaccaatattacaaaaaggtgaagaaatatttgtatcttgaatgtttgtaaaagcagtaaacccagcaaattgtactttatttaatcaaataaactgcaagacctaatctagcttctatttaccaccaggagagacacatgaatgctaccaaatcaatcatattgtaaccagtcagtttcatttaaaatatgatcactccatgggatgatgccacaactcaagtttatcatgctatcaagagagacttcatgcccaatggttcaccaatcaccatagcaaagtccaattattattatcaacactaaagatagcatctaaaggagcacttatctaggcaagttcccaaaactacaagttgctatgtcaagtcacctgtggatggtaattacagacagtatccccatcaaacgactccacaaaaagcattccaaaatactagccacaacaatcgaaataagctcccttactacattattatcagctcatatcatcgaaataacctgaacaagaggaggcagcgcaagaagagcctcacctgccgggcaaccttggagcacagcgcgggcggcttcccaccggctatcaccttctcgaagaagcactcctgcgcctgcgcgagcatgagcttctccagcatggcagcgcactcgggggtgacgtcgacggtggtggccccggccgcgacggccttggcggcgacgccgctctccctcatccacgcgaacgcccccgccgcgctctggaacgagccgcacgcggtcctgatcccgacgtcggtggcccggtccgcggcgagcgcgatctgggagtagacggcggcgaggttgaagagcacggcggccttctcgaggtggatggaggcgacgctggccttcttgccggtcttgaaggcgtcgtgccaggtgaaggcgagggagtggacgtgggcgcggtcgggggagatggggaagcggggctccacgagggacagggcgcgcgcgtaggcgaggagcgcgtcccgcctccgctcgagggaggacgggtccgggagcgacggctgctcgacgtcggcgcgcaggtcgcgcaccgcggcgaggtcgtcgtcggccgcggccgcctcccgctccgagtaggcggaggcgatgtagaggcggagcgggcggtagaggtcggtgggggtggtcctcttctcgtggatcgccagcatcacgttctccgccgacgacatggcggccgccggagggaagagatcggggcggcggcggtggagtgcttcgcggcgaaggaaaaaaaaaaAgaggagaaaaaaAttgggggaagttggaagccgtcgcggtaggagtaggactaggctgagttcggatgggggagatgggaacccaacttctgcgcacggaaaacggagcagtccattaacgcgtgattaattaagtattagctattttttttcaaaaagggattaatttgatttttttaagcaacttttgtatagaaacttttttaaaaaaatgcaccgtttagcagtttgaaaagcgtgcacgcggaaaacgaggggaagggtatgggaaaagatgcatgcgaacacagccagtagtcagtcgtcttgtgttgtgtgaggaggaggaggattgcttcgtcgcgttgagattcgtgctgggttggggtggggttgggttggacggtcggtgcaccgcgtgggaccaatactattaagagcgaagtttacgccgtgtttagtccaaaataaatctttaaacttccaacttttccatcacatcaaaacttttctacacacatcagcttttaacttttccgtcacatcgttccaatttcaaccaaactttcaattttttgttaactaaacacataatagtatagcgaactattactagctccaaattatttataatcaattcatacaatagttatatataaattacattattaatatatggtcacacctatcatacgcgcattgcgtcttaaagtctgtgctgctggtggctacaaatttgtagcctgctgcttatctctctcttcttttatctcctcgatatatgtttatagctagcttataatctaatattctacctgctctaaggtggtgtttgaaactgatgaagatgaagattaaatagatgcaatgtaaaatgagaaattcattagcatataattgattaagtttaaattattacaaactcgacaaatttttaattaaaaatgataacgaaaatcgagataaaatctgaatctcttttgctacagctatgtatctatgattttttttggttaattggatccatgccacaacaattttgtgaaattaaaaaaataacgatactgttcgtcatatcggatacatgccactgaaaatttcttaaattggaaccatgccactcccgtccatttttccgtctcctctcccacaccgtatcgttcccccgtttaatcgtttctatctccctcttctctccctgcaactacaaaaagaacggcggcggccgagcactcccacgcatcgacgacggcggcggcgagccctggggccggccaccttcttccggcagccgagcactcccgcggacggcggcagccgagcactcccgtggatcgacgacggcggcggcgagccccggcgccggccaccttcttccggtggccgagctcgcccagcgcatcgttgagcagggcaaggacatcggcgatgacggcggattgtccgccgcgcgctcccgcacctcagtgacctcctccgctccctcctccactcccccgtgggcgtcatcgtcttcctctccgacctcctcaacttgcgggcgctcgccgtcgtcttcgcccgtttctctagctacacgagcgcggcctcagcctctcctccacccgcctcctctccccctcagccacctccgccgacagctgtggcggcggcggtgccatcgatatcgcaggctccgccccaagccctgcacgggagcggcggatctcgattcccaccggcgccattgggatcctccacgccatggccatccccgtcgagctctccgaccacaactcccttgtcgtcaagtccagcctcctctgcccactcgctgttgacgctgccctcatcgtcaacgctccggcaggggtggcgaggcggacccggagttggcgtcgtccaactcgggaagtccgccgcggcggcggccgcaccggtttcgatagttaaggaaccgttgtgtctggttttccgatcgagggacgaaaatcgaatttggtataaagttaagggacctcagatgaacttattcccactaccgaccgaatttgtgccaggtttaggcagattttgggaccactttgggcctaactcacacgtgcatttgggctgaaattacaaacactgatgggatgaatttactctcgttaaatttgccggtaattaaactgagcaacaatcaagagcacatatcagctatgagcctatctgttaacaacatatactattcagtttctccggtgcggcaccaaatattagctcaacaatctgttaccctaatactactaatcttcaggcgcaaagacatgttgtccccccaacgcgaaatcagagggaagcaaacgcgtaatttcttcagaaattacaccgattcactcctattacaggacactgaactgcacgcctcgtattataggacactcctctggtagcaaacgtccagccttgcaagcacaccaccatcctcccattaatttctgatatcaatctgccaaaaaacatgcttgtgatcgaaactaatgcatcatcaaattagtagtagtaggatgtgacttcgaatatccaattgatatcataaaagataaacaatttatctacccgagatatggacatcttgattaaatggaaagtgcaaaggactatcaaacataactggcattcaaacatttgaaagcaaaatgcccagcgtttcagttacttccgtattgtaggttactgtttcagctttcaagctattgacccagcaatgtcatgcctgtagcctgcctataaaaccaaaataaacttttctgcatgcattgttggcataatctaaacaaaatttcagactttccgtagcaattttggatgcaatcagccaaaggatatttgaagtctatacatattaaaagtaagcagcttatccaaacctgcttaattaatttcaaatttacagacaagtgtctgcagaacaaacataaaaactaaaaaggacattttgagcgttgccttcttctctaacaactaatggttagcttggaagaaagctagtattgctaatatatacatgtatacttcaagctagtatggagttttatgaattcaaaaactgaaaatggacagttttgcatcggcaaaagtaaatttaatagcatgcacctcctgactgacagctaaccaaatttgaaaacaggcactaaaaaccattggccaagattatatagcaatgcgtgggaatcaatttacaccgagaaacatgctaacatttacaccaaaaaccggtggaaaacctcttggaaaagagaataaaaaacaggcacttaaaaaatatagcttggtggcgacattgcttctaagttctaactgccaagacgtgtgtatattttatagtctcttggttaacatgaactaaaacagacatgaggtgatctgcttgctatttacacaaacagagaaaagatacctcctctagtacaactgtagagtgtagtagaaaagaattccaactcagaacttcaaagctgcaaaaagcttcgaagcagttcaaagattctatagaagcctcgtatttttcagggaaaaacctacgatattcttgatatttgctcccagacgattggggaagattctaacaagaaggaagcagtggatgcttcgagggagaagtgcttctcatcaatcatgaacaggtaagtgccagccctggttatatcacccctctgtaacagtttcctaacaatggaatttagcatgcgggagtcggcggaacagccattctcctccattgaaagaaatagatcatccaattcttctagcgacccctgctctataagattttctgccattaaactgtaggtccaaacatctggcactaaaccgttagccaagtgagcagcaaacaaatccttagcttcatccattcttccacatttaagtaaggcaccaatcataatgttaaaagtcctagtctccagctgtaaatccgtcaaacataggttctgaaacattcgaagtgcctcgtcagtgagattgtttttgcaaagtccatgaaggattatgttgtacgtgctaagttcaagctgtgttccacttttggtaatactgacatagagttcttttgcagcagcagttcttctggtatgaaataaaccttgcagaattatgttatacgtaataatattaggactaacaccactgctcaccatctctttgaaaagagctaatgcgtcatccatcctgctaactctacagtagccattaatcaaggtgccataggtaacaatatcaggtttcaccccaactgagaccatgctggcaagtaacttcgttgcttcatccatcttaccagctaagcagcatccatcgataagagtattgtacgtaatgacattgggcttcacaccaatacgtaccat
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| CDS seq | atggtacgtattggtgtgaagcccaatgtcattacgtacaatactcttatcgatggatgctgcttagctggtaagatggatgaagcaacgaagttacttgccagcatggtctcagttggggtgaaacctgatattgttacctatggcaccttgattaatggctactgtagagttagcaggatggatgacgcattagctcttttcaaagagatggtgagcagtggtgttagtcctaatattattacgtataacataattctgcaaggtttatttcataccagaagaactgctgctgcaaaagaactctatgtcagtattaccaaaagtggaacacagcttgaacttagcacgtacaacataatccttcatggactttgcaaaaacaatctcactgacgaggcacttcgaatgtttcagaacctatgtttgacggatttacagctggagactaggacttttaacattatgattggtgccttacttaaatgtggaagaatggatgaagctaaggatttgtttgctgctcacttggctaacggtttagtgccagatgtttggacctacagtttaatggcagaaaatcttatagagcaggggtcgctagaagaattggatgatctatttctttcaatggaggagaatggctgttccgccgactcccgcatgctaaattccattgttaggaaactgttacagaggggtgatataaccagggctggcacttacctgttcatgattgatgagaagcacttctccctcgaagcatccactgcttccttcttgttagaatcttccccaatcaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccgcccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacgacgacctcgccgcggtgcgcgacctgcgcgccgacgtcgagcagccgtcgctcccggacccgtcctccctcgagcggaggcgggacgcgctcctcgcctacgcgcgcgccctgtccctcgtggagccccgcttccccatctcccccgaccgcgcccacgtccactccctcgccttcacctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacctcgagaaggccgccgtgctcttcaacctcgccgccgtctactcccagatcgcgctcgccgcggaccgggccaccgacgtcgggatcaggaccgcgtgcggctcgttccagagcgcggcgggggcgttcgcgtggatgagggagagcggcgtcgccgccaaggccgtcgcggccggggccaccaccgtcgacgtcacccccgagtgcgctgccatgctggagaagctcatgctcgcgcaggcgcaggagtgcttcttcgagaaggtgatagccggtgggaagccgcccgcgctgtgctccaaggttgcccggcaggtgggcatattctatgaagaagcctatgcagctcttagcgcagctcctctcagtcaacactttgataagacatgggtttctcatgtccagctgaaggcagctcagttctatgctgatgcttgctataggtgttctttggatcttcacgagaaagaagaaattgcacaggaaattgcacgtctgaagattggaattagcgctttggcagatgccaagaaggtggccaggggagttgctgccccacttcttgattctgttaataagctggagagtaatatgaagaccaacttggagagggctatgaaagagaatgaccgtgtttacctgatgagggttccggatgctagttctcttggctcgctccctgcagcatcacttgtaaagcctacatctttggctgaagttctagatgctagcaaagagaggcttttttcatcacttgtgcctgatggaagcatgaaagcactttccaagtacactgagatggtagataacatcatcaggattcaagcggagaaattacagcaagctagtgagatcactagagttaggttgaaggaaatggacttgcccgattccattctttcattggaaggtaatatcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccctgctggattggaagcggagttgcagcagcttagggatttgagcagagatgacatactccctaaattgatggccggtgttggatcacacgatgatctttttaagaaggagatttcaaagtatgatcctgtctgtgctgagatagctgataacattgtggcgcaagaacaactgctgctacaaatacaggcacaaaatgaacagtttgctgcggtgttcaacctagaggattacaaagttgctcgtgagagatgttacaagcaaattgctgcggctgttgctaaataccgagatattaagaagaacattaatgaaggcctcaatttttatgtgacattacaggaagcaattggcaaaataaagcagcagtgcagtgacttcataatgacccgaaacattcaatgccgtgaaatgatcgaagatgtgcagaagaagctagcaggtttcagcttctcatcttcttccagccaagcaagcatgcagaggaacacttctgtgccaccagatcagaacagtccatcaccaccaccaccgtcgtcgcatgctccccatgctcagggcccatatggtgttccacccgcaggcgattcgagacccgtgtactctcagcccgagcaaagacctgcttactcacagccatacccgccctatggcgcgccaccgcaacagcctccatatggtgcgccgtcgcaacagcctccttatggcgcgccccaccctggtcactaccaacagccaccacaccagcaacctcccaaccatgactatggccaacaagcatatcctggaggatggcgcgggcagtactacaatccacatcagccccagccgcagccacagccgccatatcctcagccaccgtacaatgcccagggcctggcgccctcgggggcaggcatggcgcgccgcgtccctacccgcccgcgcggcggtggcggcggcggcgtcccacgctcggagggctcgatccaagggcgaggaggccgcgcggggggcagtggcgccgaggacgcacgccacgtgttcgacgaattgctccggcgtggcaggggcgcctcgatctacggcttgaaccgcgccctcgccgacgtcgcgcgtcacagccccgcggccgccgtgtcctgctacaaccgcatggcccgagccggcgccggcaaggtaactcccaccgtgcccacctatgccatcctcatcggctgctgctgccgtgcgggccgcttggacctcggtttcgcggccttgggcaatgtcgtcaagaagggatttagagtggaagccatcaccttcactcctctgctcaagggcctctgtgccgacaagaggacgagcgacgcaatggacatagtgctccgcagaatgaccgagctcggatgcataccaaatgtcttctcctacaatattcttctcaacgggctgtgtgatgagaacagaagccaagaagctctcgagctgctgcacatgatggctgatgatcgaggaggaggtagcccacctgatgtggtgtcgtataccactgtcatcaatggattcttcaaagagggggatctggacaaagcatacagtacataccatgaaatgcttgatcgggggatttcaccaaatgttgtgacctacaactctactattgctgcgttatgcaaggctcaagctatggacaaagccatggaggtacttaacaccatggttaagaatggtgtcatgcctgattgcatgacatataatagtattctgcatggatattgctcttcagggcagccaaaagaggctattggaacactcaaaaagatgcgcagtgatggtgtcgaaccagatgttgttacttatagctcgctcatggattatctttgcaagaatggaagatccaccgaagctagaaagattttcgattctatgaccaagaggggcctagagcctgatattgctacctatggtaccctgcttcaggggtatgctaccaaaggagcccttgttgagatgcatgctctcttggatttgatggtacgaaatggtatccaaccggatcatcatgtattcaacattctaatatgtgcatacgctaaacaagagaaagtagatcaggcaatgcttgtattcagcaaaatgaggcagcatggattgaatctgaatgtagtgacctatggaacagttatagatgtactttgcaagtcaggcagtgtagatgatgctatgctttattttgagcagatgatcgatgaaggactaaCccctaacattattgtgtatacctccctaattcatggtctgtgcacctatgacaagtgggagaaggctgaagagttattttttaaaatgttggacagtggcatctgtccgaacactgttttctttagttcaataattagcaatctttgcaaagaagggagggttatagaatctgaaaaactttttgacctgatggtacgtattggtgtgaagcccaatgtcattacgtacagtactcttatcgatggatgctgcttagctggtaagatggatgaagcaacgaagttacttgccagcatggtctcagttggggtgaaacctaatattgttacctatggcaccttgattaatggctactgtagagttagcaggatggatgacgcattagctcttttcaaagagatggtgagcagtggtgttagtcctaatattattacaagaactgctgctgcaaaagaactctatgtcagtattaccaaaagtggaacacagcttgaacttagcacgtacaacataatccttcatggactttgcaaaaacaatctcactgacgaggcacttcgaatgtttcagaacctatgtttgacggatttacagctggagactaggacttttaacattatgattggtgccttacttaaatgtggaagaatggatgaagctaaggatttgtttgctgctcactcggctaacggtttagtgccagatgtttggacctacagtttaatggcagaaaatcttatagagcaggggtcgctagaagaattggatgatctatttctttcaatggaggagaatggctgttccgccgactcccgcatgctaaattccattgttaggaaactgttacagaggggtgatataaccagggctggcacttacctgttcatgattgatgagaagcacttctccctcgaagcatccactgcttccttcttgttagaatcttccccaatcgtctgggagcaaatatcaagaatatcgtag
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| Protein seq | MVRIGVKPNVITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHLANGLVPDVWTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPINVMLAIHEKRTTPTDLYRPLRLYIASAYSEREAAAADDDLAAVRDLRADVEQPSLPDPSSLERRRDALLAYARALSLVEPRFPISPDRAHVHSLAFTWHDAFKTGKKASVASIHLEKAAVLFNLAAVYSQIALAADRATDVGIRTACGSFQSAAGAFAWMRESGVAAKAVAAGATTVDVTPECAAMLEKLMLAQAQECFFEKVIAGGKPPALCSKVARQVGIFYEEAYAALSAAPLSQHFDKTWVSHVQLKAAQFYADACYRCSLDLHEKEEIAQEIARLKIGISALADAKKVARGVAAPLLDSVNKLESNMKTNLERAMKENDRVYLMRVPDASSLGSLPAASLVKPTSLAEVLDASKERLFSSLVPDGSMKALSKYTEMVDNIIRIQAEKLQQASEITRVRLKEMDLPDSILSLEGNITLPLDLKEDVEAVQISGGPAGLEAELQQLRDLSRDDILPKLMAGVGSHDDLFKKEISKYDPVCAEIADNIVAQEQLLLQIQAQNEQFAAVFNLEDYKVARERCYKQIAAAVAKYRDIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDVQKKLAGFSFSSSSSQASMQRNTSVPPDQNSPSPPPPSSHAPHAQGPYGVPPAGDSRPVYSQPEQRPAYSQPYPPYGAPPQQPPYGAPSQQPPYGAPHPGHYQQPPHQQPPNHDYGQQAYPGGWRGQYYNPHQPQPQPQPPYPQPPYNAQGLAPSGAGMARRVPTRPRGGGGGGVPRSEGSIQGRGGRAGGSGAEDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSCYNRMARAGAGKVTPTVPTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDLDKAYSTYHEMLDRGISPNVVTYNSTIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPDVVTYSSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYGTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNLNVVTYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTYDKWEKAEELFFKMLDSGICPNTVFFSSIISNLCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGCCLAGKMDEATKLLASMVSVGVKPNIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVWTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWEQISRIS |
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| Function | Protein Rf1, mitochondrial [UniProtKB/Swiss-Prot:Q76C99] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0015610 | OsLiXu_10g0015610.01 | Chr10 | 21057555 | 21070007 | - | NAM | ||
| CDS seq | atggtacgtattggtgtgaagcccaatgtcattacgtacaatactcttatcgatggatgctgcttagctggtaagatggatgaagcaacgaagttacttgccagcatggtctcagttggggtgaaacctgatattgttacctatggcaccttgattaatggctactgtagagttagcaggatggatgacgcattagctcttttcaaagagatggtgagcagtggtgttagtcctaatattattacgtataacataattctgcaaggtttatttcataccagaagaactgctgctgcaaaagaactctatgtcagtattaccaaaagtggaacacagcttgaacttagcacgtacaacataatccttcatggactttgcaaaaacaatctcactgacgaggcacttcgaatgtttcagaacctatgtttgacggatttacagctggagactaggacttttaacattatgattggtgccttacttaaatgtggaagaatggatgaagctaaggatttgtttgctgctcacttggctaacggtttagtgccagatgtttggacctacagtttaatggcagaaaatcttatagagcaggggtcgctagaagaattggatgatctatttctttcaatggaggagaatggctgttccgccgactcccgcatgctaaattccattgttaggaaactgttacagaggggtgatataaccagggctggcacttacctgttcatgattgatgagaagcacttctccctcgaagcatccactgcttccttcttgttagaatcttccccaatcaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccgcccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacgacgacctcgccgcggtgcgcgacctgcgcgccgacgtcgagcagccgtcgctcccggacccgtcctccctcgagcggaggcgggacgcgctcctcgcctacgcgcgcgccctgtccctcgtggagccccgcttccccatctcccccgaccgcgcccacgtccactccctcgccttcacctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacctcgagaaggccgccgtgctcttcaacctcgccgccgtctactcccagatcgcgctcgccgcggaccgggccaccgacgtcgggatcaggaccgcgtgcggctcgttccagagcgcggcgggggcgttcgcgtggatgagggagagcggcgtcgccgccaaggccgtcgcggccggggccaccaccgtcgacgtcacccccgagtgcgctgccatgctggagaagctcatgctcgcgcaggcgcaggagtgcttcttcgagaaggtgatagccggtgggaagccgcccgcgctgtgctccaaggttgcccggcaggtgggcatattctatgaagaagcctatgcagctcttagcgcagctcctctcagtcaacactttgataagacatgggtttctcatgtccagctgaaggcagctcagttctatgctgatgcttgctataggtgttctttggatcttcacgagaaagaagaaattgcacaggaaattgcacgtctgaagattggaattagcgctttggcagatgccaagaaggtggccaggggagttgctgccccacttcttgattctgttaataagctggagagtaatatgaagaccaacttggagagggctatgaaagagaatgaccgtgtttacctgatgagggttccggatgctagttctcttggctcgctccctgcagcatcacttgtaaagcctacatctttggctgaagttctagatgctagcaaagagaggcttttttcatcacttgtgcctgatggaagcatgaaagcactttccaagtacactgagatggtagataacatcatcaggattcaagcggagaaattacagcaagctagtgagatcactagagttaggttgaaggaaatggacttgcccgattccattctttcattggaaggtaatatcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccctgctggattggaagcggagttgcagcagcttagggatttgagcagagatgacatactccctaaattgatggccggtgttggatcacacgatgatctttttaagaaggagatttcaaagtatgatcctgtctgtgctgagatagctgataacattgtggcgcaagaacaactgctgctacaaatacaggcacaaaatgaacagtttgctgcggtgttcaacctagaggattacaaagttgctcgtgagagatgttacaagcaaattgctgcggctgttgctaaataccgagatattaagaagaacattaatgaaggcctcaatttttatgtgacattacaggaagcaattggcaaaataaagcagcagtgcagtgacttcataatgacccgaaacattcaatgccgtgaaatgatcgaagatgtgcagaagaagctagcaggtttcagcttctcatcttcttccagccaagcaagcatgcagaggaacacttctgtgccaccagatcagaacagtccatcaccaccaccaccgtcgtcgcatgctccccatgctcagggcccatatggtgttccacccgcaggcgattcgagacccgtgtactctcagcccgagcaaagacctgcttactcacagccatacccgccctatggcgcgccaccgcaacagcctccatatggtgcgccgtcgcaacagcctccttatggcgcgccccaccctggtcactaccaacagccaccacaccagcaacctcccaaccatgactatggccaacaagcatatcctggaggatggcgcgggcagtactacaatccacatcagccccagccgcagccacagccgccatatcctcagccaccgtacaatgcccagggcctggcgccctcgggggcaggcatggcgcgccgcgtccctacccgcccgcgcggcggtggcggcggcggcgtcccacgctcggagggctcgatccaagggcgaggaggccgcgcggggggcagtggcgccgaggacgcacgccacgtgttcgacgaattgctccggcgtggcaggggcgcctcgatctacggcttgaaccgcgccctcgccgacgtcgcgcgtcacagccccgcggccgccgtgtcctgctacaaccgcatggcccgagccggcgccggcaaggtaactcccaccgtgcccacctatgccatcctcatcggctgctgctgccgtgcgggccgcttggacctcggtttcgcggccttgggcaatgtcgtcaagaagggatttagagtggaagccatcaccttcactcctctgctcaagggcctctgtgccgacaagaggacgagcgacgcaatggacatagtgctccgcagaatgaccgagctcggatgcataccaaatgtcttctcctacaatattcttctcaacgggctgtgtgatgagaacagaagccaagaagctctcgagctgctgcacatgatggctgatgatcgaggaggaggtagcccacctgatgtggtgtcgtataccactgtcatcaatggattcttcaaagagggggatctggacaaagcatacagtacataccatgaaatgcttgatcgggggatttcaccaaatgttgtgacctacaactctactattgctgcgttatgcaaggctcaagctatggacaaagccatggaggtacttaacaccatggttaagaatggtgtcatgcctgattgcatgacatataatagtattctgcatggatattgctcttcagggcagccaaaagaggctattggaacactcaaaaagatgcgcagtgatggtgtcgaaccagatgttgttacttatagctcgctcatggattatctttgcaagaatggaagatccaccgaagctagaaagattttcgattctatgaccaagaggggcctagagcctgatattgctacctatggtaccctgcttcaggggtatgctaccaaaggagcccttgttgagatgcatgctctcttggatttgatggtacgaaatggtatccaaccggatcatcatgtattcaacattctaatatgtgcatacgctaaacaagagaaagtagatcaggcaatgcttgtattcagcaaaatgaggcagcatggattgaatctgaatgtagtgacctatggaacagttatagatgtactttgcaagtcaggcagtgtagatgatgctatgctttattttgagcagatgatcgatgaaggactaaCccctaacattattgtgtatacctccctaattcatggtctgtgcacctatgacaagtgggagaaggctgaagagttattttttaaaatgttggacagtggcatctgtccgaacactgttttctttagttcaataattagcaatctttgcaaagaagggagggttatagaatctgaaaaactttttgacctgatggtacgtattggtgtgaagcccaatgtcattacgtacagtactcttatcgatggatgctgcttagctggtaagatggatgaagcaacgaagttacttgccagcatggtctcagttggggtgaaacctaatattgttacctatggcaccttgattaatggctactgtagagttagcaggatggatgacgcattagctcttttcaaagagatggtgagcagtggtgttagtcctaatattattacaagaactgctgctgcaaaagaactctatgtcagtattaccaaaagtggaacacagcttgaacttagcacgtacaacataatccttcatggactttgcaaaaacaatctcactgacgaggcacttcgaatgtttcagaacctatgtttgacggatttacagctggagactaggacttttaacattatgattggtgccttacttaaatgtggaagaatggatgaagctaaggatttgtttgctgctcactcggctaacggtttagtgccagatgtttggacctacagtttaatggcagaaaatcttatagagcaggggtcgctagaagaattggatgatctatttctttcaatggaggagaatggctgttccgccgactcccgcatgctaaattccattgttaggaaactgttacagaggggtgatataaccagggctggcacttacctgttcatgattgatgagaagcacttctccctcgaagcatccactgcttccttcttgttagaatcttccccaatcgtctgggagcaaatatcaagaatatcgtag
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| Protein seq | MVRIGVKPNVITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHLANGLVPDVWTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPINVMLAIHEKRTTPTDLYRPLRLYIASAYSEREAAAADDDLAAVRDLRADVEQPSLPDPSSLERRRDALLAYARALSLVEPRFPISPDRAHVHSLAFTWHDAFKTGKKASVASIHLEKAAVLFNLAAVYSQIALAADRATDVGIRTACGSFQSAAGAFAWMRESGVAAKAVAAGATTVDVTPECAAMLEKLMLAQAQECFFEKVIAGGKPPALCSKVARQVGIFYEEAYAALSAAPLSQHFDKTWVSHVQLKAAQFYADACYRCSLDLHEKEEIAQEIARLKIGISALADAKKVARGVAAPLLDSVNKLESNMKTNLERAMKENDRVYLMRVPDASSLGSLPAASLVKPTSLAEVLDASKERLFSSLVPDGSMKALSKYTEMVDNIIRIQAEKLQQASEITRVRLKEMDLPDSILSLEGNITLPLDLKEDVEAVQISGGPAGLEAELQQLRDLSRDDILPKLMAGVGSHDDLFKKEISKYDPVCAEIADNIVAQEQLLLQIQAQNEQFAAVFNLEDYKVARERCYKQIAAAVAKYRDIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDVQKKLAGFSFSSSSSQASMQRNTSVPPDQNSPSPPPPSSHAPHAQGPYGVPPAGDSRPVYSQPEQRPAYSQPYPPYGAPPQQPPYGAPSQQPPYGAPHPGHYQQPPHQQPPNHDYGQQAYPGGWRGQYYNPHQPQPQPQPPYPQPPYNAQGLAPSGAGMARRVPTRPRGGGGGGVPRSEGSIQGRGGRAGGSGAEDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSCYNRMARAGAGKVTPTVPTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDLDKAYSTYHEMLDRGISPNVVTYNSTIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPDVVTYSSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYGTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNLNVVTYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTYDKWEKAEELFFKMLDSGICPNTVFFSSIISNLCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGCCLAGKMDEATKLLASMVSVGVKPNIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVWTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWEQISRIS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.118714 | 0.0 | 0.047110 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0501700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g35230 | SBH | 0.199640 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0495100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0016290 | SBH | 0.346097 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0016310 | RBH | 0.0 | 0.0 | 0.263669 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0015540 | RBH | 1.473240 | 0.876703 | 2.494554 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0016530 | SBH | 0.0 | 0.043213 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0015860 | RBH | 0.0 | 0.000000 | 3.064457 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0312000 | SBH | 0.739509 | 1.794182 | 1.7923905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0016190 | RBH | 0.070883 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0334700 | SBH | 0.781508 | 1.517203 | 5.5260035 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0015500 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0015380 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0015900 | SBH | 1.654729 | 1.075220 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0015830 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0016060 | RBH | 0.058218 | 0.850175 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G016100 | RBH | 0.161260 | 0.0 | 0.258236 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0016000 | RBH | 0.135837 | 0.753253 | 1.725822 |
