Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsLaMu_04g0013490		OGI:04064690 \| 11/16			LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)			Chr04:21595917-21603661		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		SDRLK-51, YK18, SDRLK-52
DNA seq		atgactatcctccttgtcattcttgggcttcatctctgcagcctacacctccctgcaatctctgctgcagcagacacgctctctcccggccaatcgatcgccggcgacgacaggctcgtctccagcaacggcaagttcgcgctcggcttcttcaacaccggcagtaagtcctctggaaatgacactctcagctactggtacctaggcatatggttcaacaaagtcccaaacaaaacccatgtttggatagcaaacaggggtagcccggtcacagatgcaacctcatcacatctcacaatctcccccgatggcaacctcgccatcgtaagccgagccgatagctccatcgtttggtctagccaagccaacatcacaagcaacaacaccgttgccgtgctgttggacaccggaaaccttgtactacaaagctcctcaaactcatcacacattttgtgggagagtttcgaccatccgaccgatgTtttcctccccagtgcgaagattggtctcaacaagatcaccggcctaaaccgccgtatcttttcgagaagggatctagtagaccaagccccaagtgtgtactctatggagtttggacccaagggtggttaccagttggtatggaactcatcggtagaatactggtctagcggcgaatggaacggtcggtacttcagcaggataccggagatggtagtcaagtcaccccattataccccattcattttccaaatcgaatatgtgaacaatgatcaagaggtgtacttcacataccgtatacacgacgataccataccactgtacaccgtgctagaagtaactgggcaaagaaaggccttggcctggttaaatgacacacagggttggcaagcagtcttcacccatccaaatgatcagtgtgaagttgctgctacctgtgggcctttcacaatctgcaatgacaacacatttccatcttgtagctgcatggaaggcttctccatagaatcacctgacagctgggaactaggagacagaacaggtgggtgcaggaggaacattccattagattgtgttagcagcagaagtgacatcttcaacgctgtaccagccactagattgccctacaatgcccatgccgtagaatccgtcacgactgcgggcgaatgcgagagtatttgccttggcaagtgctcttgcacggcatattcatttggtaattacagtggttgctccatatggcatggtaaattggttaatgtgaaacaacaaactgatgacagcacctctgctaatggagaaacacttcacattcgccttgctgctagagagcttcaagctagaaaaagcaataaagggttagttgtaggggttgtggtatctgcaagcctctctgctttgggtatcttaacacttgtcttgctactgatcatgatcaggaggcacagaaagaagttgcactgtcaagcattgaacagcatttatgctggtactggagttataccatttagatatagtgatttgcatcgtgcaactaaaaatttttcagagcaaattggggcaggtggttttggttctgtgttcaaggggttgttaaacgggtcaaccgcgatagcagtgaaaaggcttgtctcctattgtcaagtggagaagcaattcagagctgaggtgagttccattggagtcattcatcacaccaatttggtcaaactgattggtttttcttgtaagggtgatgagaggttacttgtttatgaatacatgtcaaatggctcccttgatactcatttattcagaagcaataacagtgtaaccctgaattggagtactagatatcagatagctcttggagttgctcgaggactggcttacttgcatgagagttgtcgagattgcatcatacattgcgatatcaaaccacaaaacatacttctcgatgattcgttcgttccaaaaattgctgacTttggaatggcaaagcttctaggaagggattttagtcgggttatgactacagcgagaggaactattggatatctagcacctgaatggTttagcggagtggctgtcacgccaaaagttgatgtgtatgcttatggaatggtactcttagaaattatatccggAaagatgaactcgcatagagagtctaatagttatgctgatcacatcgtttgtttccctcttgaagttgcacataagcttcttgagggggatgttctaagcttggtggatggcaaattaaatggcgatgtcaatgtcgaggaggctgaaagagcttgcaagcttgcatgttggtgcattcaagagaatgaacttgaccgaccgacaatgggtaaggtggtccaaattctcgaaggtctactcgaacttgatttgcccccgatgccaaggctacttcagtctatagtacagagctcatggaaaacagagacccaacactgatttgtactgccaaaagaagtgctaggataaaatagtgtttttccatggctcttttgtggcatatgttggtgagaagagagttttagcttgtaatggcttgtgtgctagtatgttgatgattttggacatgttgtgctataagatgttatatgctccgtttataaacatgcagttacaagtgtacataatttgctttatttgttttgctatatataatgatgtgaaataatatttactctaggtctctagcttaaaatattgggttaatttgatccatgccactgcaactttggctattcagaaaaatgccattacaatttacctattcgtaaccgtgccattgaaattttacaaaattaaaaccgtgccactcccgtcacgtttgccgtctccttccttatttctgccgtcttcgtctcgtttttagctggttgaagaagaagaacaagaaaatgaacaaggggaaaagcaggagaggcaacgtcggccgccgccgtcacgcatgcgctcggctgccgcgccgccgaccatcgcgttggtactgtgtttctcgaaaaaaaaaaaattacatgccaactaaccaaaacactctaccgcgtacggccatgtggctgccgttttccccggttttgtagcgttcatgtgttccatgctttccatgatcgatacatcgactcaaactaagctagttagagatggtacggttttccaattgactggctctcaatcatttgcagctttggagtctttgcccactgtaactgtgcacaaaatacaggtttttcccatttggagtacgtatagtactatagtttgtagacccatgccgaccagaagtcatccagctgtgcactgatcgagcaaaccaaagacaaaagaaacaggggtagtctaacgcggaaacgcgtgaattcacacgcttcaattctagtaagagcaagtttaataatatggcccattactagctccaatttatctatagataatttaatagcatattcatgcaatagttacttactataccattaacatatagtcccacctgtacattcttggagtccatgctgcagctgctgctcttctctctcatCttttatcttattaaaatatgtttatagctagctaatagcccgtcattgtacctgctctaatagttAaaaaaaagaggttatgtttaacaactttcactagatatgattaaaaaatgactctcatgattcaagaaactttccacggatgatttgaaaatcatttacaggaaaaacttaaaaaaaactcggaaaacaacttcctactattccatgttgagaaaaagaatctctctacttgccactaataacgactgacttgtcctttttacaatccagttgcaatcaTtttttttgaatacgcaaggagcgcatctttgtattaaggagaaataaagttatgagataatccattgtatgccactgagtttgtcataggtctacaatttaccactgactttgtcacgttctataatatgccatcgaTttttgcttaacttctacgatttaccaccgccatccggttagtctctgttagtactgtacactttcatccaaatgaccaaaatacccctgagacaaaaactttcaaaTtttggataaaaattctgaaatgtcagactttaagtttttggacaaattttgaatgtttacaatcttatgtttataatatggtatttcggAatttttgtccacattttggaagttttatcccaGgggtattttggtcatttggacaaaattgtacagtactaacggaggctaactggacggcgatggtaaatcatagaagttaagtaaaagtcgatggtatattatagaacgtgacaaagtcagtgacaaatcgtagagctatgacaaactcagtggcatacaatggattgtctctaaagttatttacattggaaaaggaaaattgaaggggacaggaagcaggaagctgcaaaaaaaaacaagaaaaatcctaatctcgcaaatgatggtgcgaccaagaaactctccggcagatgcagcaccggaactgccgtcctggcaagccgccaaagctctgcttccgccgccattgccttagctacctgtgcccatgatctttggtggttgttgaaaactctgttgtttctttctttccaaatggcccaagcgacaagggccgcaatggtatcaaatccgtggcgctgcgccttgtcaattttcttccggctgttacaaagccactgatggaaggaggcctcagagagaggcatgcaggctgtttgtcccactgccctcagcgccatccaccaaagttgccgggattccGggcaagcgaccaagaggtgattgatattctcctcacattggtcacaaagcacataacgggCcgggtgcggcagttgcaatcatgtacaagttgcagttatcactgtcttttctcctgtgatggctgatggaactgtcgcgTttaatataatccagttgcagtatcaagtaggagtacaagttgcagtacatacaatgtacaaaattcatactatgaacatcaatttggatgtcataaagaacttaaggactagcTAtttacaaacAataacgtcaagttggatcttcgatgttataaaagactcaggttaccatggctactccctttgtccctcccattctttagccaattgctcgccgccatgcattcgatcgtggctctgataatcatcatcgtcttcgagctcttcctcctctctcagctacacataccttcatgccatgccgctacgctcgacgccctctcaccgggccaagagctcgctggcagcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttccaaaccgacagtaacaagtcctcctccaatagcactccgaacatttacctcggcatctggttcaacaccgtccccaaattcaCccctgtatgggttgccaacggcgaaaaccctgtcgcggatctcgcatcgtgcaagctcctagtttccagcgatggcaacctcgccgtcgttgcaacgacccaggccaagaactcctccatggtctggtccagcaaagccaacatcccaaccaacaccacccttgctgttctcctggacgatggaaaccttgtcctgcgtagcactagcacaaccaatgcatcatccaccattctctggcaaagctttgatcaCcccacggatactgttctgcagggtggaaagatcggctggaacaacgccaCcggtgtgaaccgccgtcttgtctccaggaagaacaccgctgatcaagctcccggcatgtattccttcgagttactcggacacaatggccctacctccatggtctccacgttcaattcctcgaatccgtattggtccagcggagactggaacggCcggtacttcagcaacataccggagacagtagggcagacatggctatcactgaaTtttacaagcaatgagcaagagaagtatatcgagtatgcaattgcagatcccacagtgctgtcacgtaccatactggatgtctccggacagctgaaggcgctcgtttggttcgaggggtcgtgggattggcaaaccatcttcacagcacccaaatcgcagtgcgatgtctatgcTttctgtggacctttctcggtctgcaatgacatcacattcccctcctgcacctgcatgaagggcttctcagtacaatcacctgaagattgggagctagatgaccgaacaggtggatgtgtgagaaatactccgctgctctgcaacagcaataaaactgcagcaggcacggcagataagttctatcctatgacttctgttcagcttcctgataaagcccagagcataggagcagctactagtgcagatgaatgtgcagctgcctgcctcagtagctgcTCAagtactgcgtattcctacggtgaaggtggctgctctgtttggcatgacaagctgctcaatgtacgacaacaaggtaatggtgttctctaccttcgcctttctgcaaaagaagtactggaaagtaggagaaaCaatagatggggggtgatccttggtgcttcaattggtgccagcactgctgctttgggtttgatctttctgctgatgattgggatcagaaaagggaagagATataaCctcacaatggataatgttcagggaggcatgggaatcattgcatttagatacgttgatctccagcatgcaactaaaaatttttcggagaagttgggggccggcagttttggttctgtatttaaggggtcgctaagtgactcgactatcatagcagtgaaaaggcttgatggtgctcgccaaggagagaagcaattcagagctgaagtgagttccatagggataatccagcatgtaaacttggttaaactgattgggttttgctgcgaaggtgacaggaggttacttgtttatgaacacatgccaaacagttctcttgatgcccatctcttcccaagcagtggtgcagttttgagttggactattaggtaccaaatagccctcggagttgcaagaggactagcttatttgcattctagttgccgagactgcattatacactgtgatatcaaaccagagaacatacttcttgattcatctttcactcctaaagttgcagactttggaatggcaaagtttctcggaagggatttcagtcatgtcgtaaCtacaatgagaggaaccataggatatcttgctcctgagtggataagcggaacagctatcacatcaaaagtggacgtttacagctatggaatggTtttgttagaaatcatttcaggaagcaggaaCTCcagtaaacaatcttcgcgtgatggcgtgcatgaagcttgtttCcccgtgcaagttgcacgcaaTattctgaacagagacattgacagtctggtggatgcaaacttgcatggtgaagtgaatctggagcaggttgaaagagtttgcaaagtcgcatgttggtgtattcaagacaatgagtttgatcgacccacaatgagtgaggtactgcagtttctcgagggtctatctgaagttgagacacctccaatgccaagattgcttcatactcttgcaggaggtttagattcgaaaataatgtaatcactagttttgatcgttgttcgttcaCctagctagttctacacgtcacattTCtcatctgccGtttatatcgtaagcttccttgccgcttcattatgccacccttgtaatgattgtaaccattattcccactcccagcagattgttaaacttacgtgttacgtcctaataaatcagggggaaacttgacctttggtctgaa 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CDS seq		atgactatcctccttgtcattcttgggcttcatctctgcagcctacacctccctgcaatctctgctgcagcagacacgctctctcccggccaatcgatcgccggcgacgacaggctcgtctccagcaacggcaagttcgcgctcggcttcttcaacaccggcagtaagtcctctggaaatgacactctcagctactggtacctaggcatatggttcaacaaagtcccaaacaaaacccatgtttggatagcaaacaggggtagcccggtcacagatgcaacctcatcacatctcacaatctcccccgatggcaacctcgccatcgtaagccgagccgatagctccatcgtttggtctagccaagccaacatcacaagcaacaacaccgttgccgtgctgttggacaccggaaaccttgtactacaaagctcctcaaactcatcacacattttgtgggagagtttcgaccatccgaccgatgTtttcctccccagtgcgaagattggtctcaacaagatcaccggcctaaaccgccgtatcttttcgagaagggatctagtagaccaagccccaagtgtgtactctatggagtttggacccaagggtggttaccagttggtatggaactcatcggtagaatactggtctagcggcgaatggaacggtcggtacttcagcaggataccggagatggtagtcaagtcaccccattataccccattcattttccaaatcgaatatgtgaacaatgatcaagaggtgtacttcacataccgtatacacgacgataccataccactgtacaccgtgctagaagtaactgggcaaagaaaggccttggcctggttaaatgacacacagggttggcaagcagtcttcacccatccaaatgatcagtgtgaagttgctgctacctgtgggcctttcacaatctgcaatgacaacacatttccatcttgtagctgcatggaaggcttctccatagaatcacctgacagctgggaactaggagacagaacaggtgggtgcaggaggaacattccattagattgtgttagcagcagaagtgacatcttcaacgctgtaccagccactagattgccctacaatgcccatgccgtagaatccgtcacgactgcgggcgaatgcgagagtatttgccttggcaagtgctcttgcacggcatattcatttggtaattacagtggttgctccatatggcatggtaaattggttaatgtgaaacaacaaactgatgacagcacctctgctaatggagaaacacttcacattcgccttgctgctagagagcttcaagctagaaaaagcaataaagggttagttgtaggggttgtggtatctgcaagcctctctgctttgggtatcttaacacttgtcttgctactgatcatgatcaggaggcacagaaagaagttgcactgtcaagcattgaacagcatttatgctggtactggagttataccatttagatatagtgatttgcatcgtgcaactaaaaatttttcagagcaaattggggcaggtggttttggttctgtgttcaaggggttgttaaacgggtcaaccgcgatagcagtgaaaaggcttgtctcctattgtcaagtggagaagcaattcagagctgaggtgagttccattggagtcattcatcacaccaatttggtcaaactgattggtttttcttgtaagggtgatgagaggttacttgtttatgaatacatgtcaaatggctcccttgatactcatttattcagaagcaataacagtgtaaccctgaattggagtactagatatcagatagctcttggagttgctcgaggactggcttacttgcatgagagttgtcgagattgcatcatacattgcgatatcaaaccacaaaacatacttctcgatgattcgttcgttccaaaaattgctgacTttggaatggcaaagcttctaggaagggattttagtcgggttatgactacagcgagaggaactattggatatctagcacctgaatggTttagcggagtggctgtcacgccaaaagttgatgtgtatgcttatggaatggtactcttagaaattatatccggAaagatgaactcgcatagagagtctaatagttatgctgatcacatcgtttgtttccctcttgaagttgcacataagcttcttgagggggatgttctaagcttggtggatggcaaattaaatggcgatgtcaatgtcgaggaggctgaaagagcttgcaagcttgcatgttggtgcattcaagagaatgaacttgaccgaccgacaatgggtaaggtggtccaaattctcgaaggtctactcgaacttgatttgcccccgatgccaaggctacttcaccaattgctcgccgccatgcattcgatcgtggctctgataatcatcatcgtcttcgagctcttcctcctctctcagctacacataccttcatgccatgccgctacgctcgacgccctctcaccgggccaagagctcgctggcagcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttccaaaccgacagtaacaagtcctcctccaatagcactccgaacatttacctcggcatctggttcaacaccgtccccaaattcaCccctgtatgggttgccaacggcgaaaaccctgtcgcggatctcgcatcgtgcaagctcctagtttccagcgatggcaacctcgccgtcgttgcaacgacccaggccaagaactcctccatggtctggtccagcaaagccaacatcccaaccaacaccacccttgctgttctcctggacgatggaaaccttgtcctgcgtagcactagcacaaccaatgcatcatccaccattctctggcaaagctttgatcaCcccacggatactgttctgcagggtggaaagatcggctggaacaacgccaCcggtgtgaaccgccgtcttgtctccaggaagaacaccgctgatcaagctcccggcatgtattccttcgagttactcggacacaatggccctacctccatggtctccacgttcaattcctcgaatccgtattggtccagcggagactggaacggCcggtacttcagcaacataccggagacagtagggcagacatggctatcactgaaTtttacaagcaatgagcaagagaagtatatcgagtatgcaattgcagatcccacagtgctgtcacgtaccatactggatgtctccggacagctgaaggcgctcgtttggttcgaggggtcgtgggattggcaaaccatcttcacagcacccaaatcgcagtgcgatgtctatgcTttctgtggacctttctcggtctgcaatgacatcacattcccctcctgcacctgcatgaagggcttctcagtacaatcacctgaagattgggagctagatgaccgaacaggtggatgtgtgagaaatactccgctgctctgcaacagcaataaaactgcagcaggcacggcagataagttctatcctatgacttctgttcagcttcctgataaagcccagagcataggagcagctactagtgcagatgaatgtgcagctgcctgcctcagtagctgcTCAagtactgcgtattcctacggtgaaggtggctgctctgtttggcatgacaagctgctcaatgtacgacaacaaggtaatggtgttctctaccttcgcctttctgcaaaagaagtactggaaagtaggagaaaCaatagatggggggtgatccttggtgcttcaattggtgccagcactgctgctttgggtttgatctttctgctgatgattgggatcagaaaagggaagagATataaCctcacaatggataatgttcagggaggcatgggaatcattgcatttagatacgttgatctccagcatgcaactaaaaatttttcggagaagttgggggccggcagttttggttctgtatttaaggggtcgctaagtgactcgactatcatagcagtgaaaaggcttgatggtgctcgccaaggagagaagcaattcagagctgaagtgagttccatagggataatccagcatgtaaacttggttaaactgattgggttttgctgcgaaggtgacaggaggttacttgtttatgaacacatgccaaacagttctcttgatgcccatctcttcccaagcagtggtgcagttttgagttggactattaggtaccaaatagccctcggagttgcaagaggactagcttatttgcattctagttgccgagactgcattatacactgtgatatcaaaccagagaacatacttcttgattcatctttcactcctaaagttgcagactttggaatggcaaagtttctcggaagggatttcagtcatgtcgtaaCtacaatgagaggaaccataggatatcttgctcctgagtggataagcggaacagctatcacatcaaaagtggacgtttacagctatggaatggTtttgttagaaatcatttcaggaagcaggaaCTCcagtaaacaatcttcgcgtgatggcgtgcatgaagcttgtttCcccgtgcaagttgcacgcaaTattctgaacagagacattgacagtctggtggatgcaaacttgcatggtgaagtgaatctggagcaggttgaaagagtttgcaaagtcgcatgttggtgtattcaagacaatgagtttgatcgacccacaatgagtgaggtactgcagtttctcgagggtctatctgaagttgagacacctccaatgccaagattgcttcatactcttgcaggaggtttagattcgaaaataatgtaa More
Protein seq		MTILLVILGLHLCSLHLPAISAAADTLSPGQSIAGDDRLVSSNGKFALGFFNTGSKSSGNDTLSYWYLGIWFNKVPNKTHVWIANRGSPVTDATSSHLTISPDGNLAIVSRADSSIVWSSQANITSNNTVAVLLDTGNLVLQSSSNSSHILWESFDHPTDVFLPSAKIGLNKITGLNRRIFSRRDLVDQAPSVYSMEFGPKGGYQLVWNSSVEYWSSGEWNGRYFSRIPEMVVKSPHYTPFIFQIEYVNNDQEVYFTYRIHDDTIPLYTVLEVTGQRKALAWLNDTQGWQAVFTHPNDQCEVAATCGPFTICNDNTFPSCSCMEGFSIESPDSWELGDRTGGCRRNIPLDCVSSRSDIFNAVPATRLPYNAHAVESVTTAGECESICLGKCSCTAYSFGNYSGCSIWHGKLVNVKQQTDDSTSANGETLHIRLAARELQARKSNKGLVVGVVVSASLSALGILTLVLLLIMIRRHRKKLHCQALNSIYAGTGVIPFRYSDLHRATKNFSEQIGAGGFGSVFKGLLNGSTAIAVKRLVSYCQVEKQFRAEVSSIGVIHHTNLVKLIGFSCKGDERLLVYEYMSNGSLDTHLFRSNNSVTLNWSTRYQIALGVARGLAYLHESCRDCIIHCDIKPQNILLDDSFVPKIADFGMAKLLGRDFSRVMTTARGTIGYLAPEWFSGVAVTPKVDVYAYGMVLLEIISGKMNSHRESNSYADHIVCFPLEVAHKLLEGDVLSLVDGKLNGDVNVEEAERACKLACWCIQENELDRPTMGKVVQILEGLLELDLPPMPRLLHQLLAAMHSIVALIIIIVFELFLLSQLHIPSCHAATLDALSPGQELAGSDKLVSSNGRFALGFFQTDSNKSSSNSTPNIYLGIWFNTVPKFTPVWVANGENPVADLASCKLLVSSDGNLAVVATTQAKNSSMVWSSKANIPTNTTLAVLLDDGNLVLRSTSTTNASSTILWQSFDHPTDTVLQGGKIGWNNATGVNRRLVSRKNTADQAPGMYSFELLGHNGPTSMVSTFNSSNPYWSSGDWNGRYFSNIPETVGQTWLSLNFTSNEQEKYIEYAIADPTVLSRTILDVSGQLKALVWFEGSWDWQTIFTAPKSQCDVYAFCGPFSVCNDITFPSCTCMKGFSVQSPEDWELDDRTGGCVRNTPLLCNSNKTAAGTADKFYPMTSVQLPDKAQSIGAATSADECAAACLSSCSSTAYSYGEGGCSVWHDKLLNVRQQGNGVLYLRLSAKEVLESRRNNRWGVILGASIGASTAALGLIFLLMIGIRKGKRYNLTMDNVQGGMGIIAFRYVDLQHATKNFSEKLGAGSFGSVFKGSLSDSTIIAVKRLDGARQGEKQFRAEVSSIGIIQHVNLVKLIGFCCEGDRRLLVYEHMPNSSLDAHLFPSSGAVLSWTIRYQIALGVARGLAYLHSSCRDCIIHCDIKPENILLDSSFTPKVADFGMAKFLGRDFSHVVTTMRGTIGYLAPEWISGTAITSKVDVYSYGMVLLEIISGSRNSSKQSSRDGVHEACFPVQVARNILNRDIDSLVDANLHGEVNLEQVERVCKVACWCIQDNEFDRPTMSEVLQFLEGLSEVETPPMPRLLHTLAGGLDSKIM
Function		G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsLaMu_04g0013490	OsLaMu_04g0013490.01	Chr04	21595917	21603661	+	NAM
CDS seq	atgactatcctccttgtcattcttgggcttcatctctgcagcctacacctccctgcaatctctgctgcagcagacacgctctctcccggccaatcgatcgccggcgacgacaggctcgtctccagcaacggcaagttcgcgctcggcttcttcaacaccggcagtaagtcctctggaaatgacactctcagctactggtacctaggcatatggttcaacaaagtcccaaacaaaacccatgtttggatagcaaacaggggtagcccggtcacagatgcaacctcatcacatctcacaatctcccccgatggcaacctcgccatcgtaagccgagccgatagctccatcgtttggtctagccaagccaacatcacaagcaacaacaccgttgccgtgctgttggacaccggaaaccttgtactacaaagctcctcaaactcatcacacattttgtgggagagtttcgaccatccgaccgatgTtttcctccccagtgcgaagattggtctcaacaagatcaccggcctaaaccgccgtatcttttcgagaagggatctagtagaccaagccccaagtgtgtactctatggagtttggacccaagggtggttaccagttggtatggaactcatcggtagaatactggtctagcggcgaatggaacggtcggtacttcagcaggataccggagatggtagtcaagtcaccccattataccccattcattttccaaatcgaatatgtgaacaatgatcaagaggtgtacttcacataccgtatacacgacgataccataccactgtacaccgtgctagaagtaactgggcaaagaaaggccttggcctggttaaatgacacacagggttggcaagcagtcttcacccatccaaatgatcagtgtgaagttgctgctacctgtgggcctttcacaatctgcaatgacaacacatttccatcttgtagctgcatggaaggcttctccatagaatcacctgacagctgggaactaggagacagaacaggtgggtgcaggaggaacattccattagattgtgttagcagcagaagtgacatcttcaacgctgtaccagccactagattgccctacaatgcccatgccgtagaatccgtcacgactgcgggcgaatgcgagagtatttgccttggcaagtgctcttgcacggcatattcatttggtaattacagtggttgctccatatggcatggtaaattggttaatgtgaaacaacaaactgatgacagcacctctgctaatggagaaacacttcacattcgccttgctgctagagagcttcaagctagaaaaagcaataaagggttagttgtaggggttgtggtatctgcaagcctctctgctttgggtatcttaacacttgtcttgctactgatcatgatcaggaggcacagaaagaagttgcactgtcaagcattgaacagcatttatgctggtactggagttataccatttagatatagtgatttgcatcgtgcaactaaaaatttttcagagcaaattggggcaggtggttttggttctgtgttcaaggggttgttaaacgggtcaaccgcgatagcagtgaaaaggcttgtctcctattgtcaagtggagaagcaattcagagctgaggtgagttccattggagtcattcatcacaccaatttggtcaaactgattggtttttcttgtaagggtgatgagaggttacttgtttatgaatacatgtcaaatggctcccttgatactcatttattcagaagcaataacagtgtaaccctgaattggagtactagatatcagatagctcttggagttgctcgaggactggcttacttgcatgagagttgtcgagattgcatcatacattgcgatatcaaaccacaaaacatacttctcgatgattcgttcgttccaaaaattgctgacTttggaatggcaaagcttctaggaagggattttagtcgggttatgactacagcgagaggaactattggatatctagcacctgaatggTttagcggagtggctgtcacgccaaaagttgatgtgtatgcttatggaatggtactcttagaaattatatccggAaagatgaactcgcatagagagtctaatagttatgctgatcacatcgtttgtttccctcttgaagttgcacataagcttcttgagggggatgttctaagcttggtggatggcaaattaaatggcgatgtcaatgtcgaggaggctgaaagagcttgcaagcttgcatgttggtgcattcaagagaatgaacttgaccgaccgacaatgggtaaggtggtccaaattctcgaaggtctactcgaacttgatttgcccccgatgccaaggctacttcaccaattgctcgccgccatgcattcgatcgtggctctgataatcatcatcgtcttcgagctcttcctcctctctcagctacacataccttcatgccatgccgctacgctcgacgccctctcaccgggccaagagctcgctggcagcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttccaaaccgacagtaacaagtcctcctccaatagcactccgaacatttacctcggcatctggttcaacaccgtccccaaattcaCccctgtatgggttgccaacggcgaaaaccctgtcgcggatctcgcatcgtgcaagctcctagtttccagcgatggcaacctcgccgtcgttgcaacgacccaggccaagaactcctccatggtctggtccagcaaagccaacatcccaaccaacaccacccttgctgttctcctggacgatggaaaccttgtcctgcgtagcactagcacaaccaatgcatcatccaccattctctggcaaagctttgatcaCcccacggatactgttctgcagggtggaaagatcggctggaacaacgccaCcggtgtgaaccgccgtcttgtctccaggaagaacaccgctgatcaagctcccggcatgtattccttcgagttactcggacacaatggccctacctccatggtctccacgttcaattcctcgaatccgtattggtccagcggagactggaacggCcggtacttcagcaacataccggagacagtagggcagacatggctatcactgaaTtttacaagcaatgagcaagagaagtatatcgagtatgcaattgcagatcccacagtgctgtcacgtaccatactggatgtctccggacagctgaaggcgctcgtttggttcgaggggtcgtgggattggcaaaccatcttcacagcacccaaatcgcagtgcgatgtctatgcTttctgtggacctttctcggtctgcaatgacatcacattcccctcctgcacctgcatgaagggcttctcagtacaatcacctgaagattgggagctagatgaccgaacaggtggatgtgtgagaaatactccgctgctctgcaacagcaataaaactgcagcaggcacggcagataagttctatcctatgacttctgttcagcttcctgataaagcccagagcataggagcagctactagtgcagatgaatgtgcagctgcctgcctcagtagctgcTCAagtactgcgtattcctacggtgaaggtggctgctctgtttggcatgacaagctgctcaatgtacgacaacaaggtaatggtgttctctaccttcgcctttctgcaaaagaagtactggaaagtaggagaaaCaatagatggggggtgatccttggtgcttcaattggtgccagcactgctgctttgggtttgatctttctgctgatgattgggatcagaaaagggaagagATataaCctcacaatggataatgttcagggaggcatgggaatcattgcatttagatacgttgatctccagcatgcaactaaaaatttttcggagaagttgggggccggcagttttggttctgtatttaaggggtcgctaagtgactcgactatcatagcagtgaaaaggcttgatggtgctcgccaaggagagaagcaattcagagctgaagtgagttccatagggataatccagcatgtaaacttggttaaactgattgggttttgctgcgaaggtgacaggaggttacttgtttatgaacacatgccaaacagttctcttgatgcccatctcttcccaagcagtggtgcagttttgagttggactattaggtaccaaatagccctcggagttgcaagaggactagcttatttgcattctagttgccgagactgcattatacactgtgatatcaaaccagagaacatacttcttgattcatctttcactcctaaagttgcagactttggaatggcaaagtttctcggaagggatttcagtcatgtcgtaaCtacaatgagaggaaccataggatatcttgctcctgagtggataagcggaacagctatcacatcaaaagtggacgtttacagctatggaatggTtttgttagaaatcatttcaggaagcaggaaCTCcagtaaacaatcttcgcgtgatggcgtgcatgaagcttgtttCcccgtgcaagttgcacgcaaTattctgaacagagacattgacagtctggtggatgcaaacttgcatggtgaagtgaatctggagcaggttgaaagagtttgcaaagtcgcatgttggtgtattcaagacaatgagtttgatcgacccacaatgagtgaggtactgcagtttctcgagggtctatctgaagttgagacacctccaatgccaagattgcttcatactcttgcaggaggtttagattcgaaaataatgtaa More
Protein seq	MTILLVILGLHLCSLHLPAISAAADTLSPGQSIAGDDRLVSSNGKFALGFFNTGSKSSGNDTLSYWYLGIWFNKVPNKTHVWIANRGSPVTDATSSHLTISPDGNLAIVSRADSSIVWSSQANITSNNTVAVLLDTGNLVLQSSSNSSHILWESFDHPTDVFLPSAKIGLNKITGLNRRIFSRRDLVDQAPSVYSMEFGPKGGYQLVWNSSVEYWSSGEWNGRYFSRIPEMVVKSPHYTPFIFQIEYVNNDQEVYFTYRIHDDTIPLYTVLEVTGQRKALAWLNDTQGWQAVFTHPNDQCEVAATCGPFTICNDNTFPSCSCMEGFSIESPDSWELGDRTGGCRRNIPLDCVSSRSDIFNAVPATRLPYNAHAVESVTTAGECESICLGKCSCTAYSFGNYSGCSIWHGKLVNVKQQTDDSTSANGETLHIRLAARELQARKSNKGLVVGVVVSASLSALGILTLVLLLIMIRRHRKKLHCQALNSIYAGTGVIPFRYSDLHRATKNFSEQIGAGGFGSVFKGLLNGSTAIAVKRLVSYCQVEKQFRAEVSSIGVIHHTNLVKLIGFSCKGDERLLVYEYMSNGSLDTHLFRSNNSVTLNWSTRYQIALGVARGLAYLHESCRDCIIHCDIKPQNILLDDSFVPKIADFGMAKLLGRDFSRVMTTARGTIGYLAPEWFSGVAVTPKVDVYAYGMVLLEIISGKMNSHRESNSYADHIVCFPLEVAHKLLEGDVLSLVDGKLNGDVNVEEAERACKLACWCIQENELDRPTMGKVVQILEGLLELDLPPMPRLLHQLLAAMHSIVALIIIIVFELFLLSQLHIPSCHAATLDALSPGQELAGSDKLVSSNGRFALGFFQTDSNKSSSNSTPNIYLGIWFNTVPKFTPVWVANGENPVADLASCKLLVSSDGNLAVVATTQAKNSSMVWSSKANIPTNTTLAVLLDDGNLVLRSTSTTNASSTILWQSFDHPTDTVLQGGKIGWNNATGVNRRLVSRKNTADQAPGMYSFELLGHNGPTSMVSTFNSSNPYWSSGDWNGRYFSNIPETVGQTWLSLNFTSNEQEKYIEYAIADPTVLSRTILDVSGQLKALVWFEGSWDWQTIFTAPKSQCDVYAFCGPFSVCNDITFPSCTCMKGFSVQSPEDWELDDRTGGCVRNTPLLCNSNKTAAGTADKFYPMTSVQLPDKAQSIGAATSADECAAACLSSCSSTAYSYGEGGCSVWHDKLLNVRQQGNGVLYLRLSAKEVLESRRNNRWGVILGASIGASTAALGLIFLLMIGIRKGKRYNLTMDNVQGGMGIIAFRYVDLQHATKNFSEKLGAGSFGSVFKGSLSDSTIIAVKRLDGARQGEKQFRAEVSSIGIIQHVNLVKLIGFCCEGDRRLLVYEHMPNSSLDAHLFPSSGAVLSWTIRYQIALGVARGLAYLHSSCRDCIIHCDIKPENILLDSSFTPKVADFGMAKFLGRDFSHVVTTMRGTIGYLAPEWISGTAITSKVDVYSYGMVLLEIISGSRNSSKQSSRDGVHEACFPVQVARNILNRDIDSLVDANLHGEVNLEQVERVCKVACWCIQDNEFDRPTMSEVLQFLEGLSEVETPPMPRLLHTLAGGLDSKIM More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.172104	0.275736	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0419900	RBH	0.097119	0.000000	0.466324
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g34270	RBH	0.171803	0.029205	0.106384
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0419700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0013100	RBH	0.000000	0.0	0.854248
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0013920	RBH	0.095691	0.0	0.118430
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0013640	RBH	0.000000	0.227309	1.516340
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0013320	SBH	0.019342	0.033247	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0013590	RBH	2.743722	0.0	4.302621
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0328400	RBH	0.265533	0.849965	0.2211945
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0012500	RBH	0.143969	0.0	0.481970
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0325800	RBH	6.0600645	0.011856	2.215445
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0013100	RBH	0.121122	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0012690	RBH	0.953531	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0012700	RBH	3.485304	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0013300	RBH	0.138442	0.149568	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0013540	SBH	0.000000	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G012670	SBH	0.284199	0.643363	0.235737
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0012640	SBH	0.853581	0.0	4.020120

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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