Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_07g0028660 | OGI:01023240 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr07:30129532-30131537 | ||||||||
| Gene Symbol | OsFbox345, Os_F0495 | ||||||||||
| DNA seq | agtactgaatataccaattccatttaattacaaatgccatgtacataggttagttgtacaaaaagagaaattctcctatacaatctacaaaatgagacaaaacgatggcaaatctacaacaggcaaggcatttcccttgtagagaaatgccactccaaaatatcttgtgaccgccatgataagttgagcatctaaaaacttgaatcagattatcagaaagacaaaagtattaagggtcagatatatagattataataatactccattcaatgataagtaatctatgcaacacctactatttcaatacagaattgaagatcagtgtcaaatgtgcaggataagtgtcaataacataactgatgtagttccatttaattcaatctgtagcatagcttcgatattctcacaatccaccaatattaaattaccagttccattttatgagaaatttatgttgaagcagtataattgcaatcgtaacagattcaattacaatttacaagcagcaaggattgcaatttctctcacaaactatgggaacaaactgattttagcttacatgatgtatgagcctttaagttagtgttgatcttctgttccttcaggtacccttctctgacacttcagcaagaagttgattgctcacccacaggtcgcaaatcatagctagtaaataaataaaaagaagataagtgctgaagtacagtttaattggctcccacttgcaaatgttaacttatattagaattgagatgtatgtaggtgacattttcataattaatgtagatggaaaatctgaagcccgaagactgtttcaaatttgtactacgacaactcactgcaaggacagctagccacctaatttgcagagatcaactaagggagttttatttaaaataattacactaggatggtacattctacaagtaaaaactcagtaaacacacaatgtacatgcatatttctaataaatggattgatataagttggaaatggcttcactagtaaatagaacttggcttgagtagttgctgtactatgtggtgcatgcaaagttctcaattagcatttcaattattccaactggtcctgatagctgatgcatgtctgtgtgaaatcaataatagatcaaatcttaaaaaaaaatgttcaccactctttctagtacatatataataatgtctgccatgaaatgaaaaggaaatggagcaaacataatctccaatttattgaatagtgcatcatatagaagattagcacttaattgttaataccattgaagttcttgtaatggaaaagtaagcggaaatctaaaaatatgaacaattatccgtttttcaatttgatacattagatcagacagaaaaatgtccataatgtggtacactacatgagaaatagtgcattttcttagtactaccacatttctgtaaacattacagctaacttcatgagaaatataaagcagaactggagcattagctaagattcatggggaaaagaaacaagtaggttcaccctaaactcttttgcaccagtattaagcatggttgcaatgcaagtttccatcccatggctatgaatgacagccccagctctcatcaaataagcctgcaaaataccaatgaaaattagacagtttagaacacactagccgaatgtgcgctctttctcttttggcaaccatgattggacaatcaataaatgagaattctataaaagctcctaatcaacaccactcccgaatacggtatgctcgatcctaacagaagacacgagagtagccactgctcgattaaccgctcgtgagggggaatcgagtgcccctcgcaggcaattcgtcgaacaggagccgtgcaggctgtaatgagagagagagaggggggggaccttgggtgcccagaggcggtcgtcggcggcgacccagcgccaggtgctgcgtgcgtccaggagctccatcacccgccccatcacctcctccccgagcacatccacggggtcctctc
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| CDS seq | atggggcgggtgatggagctcctggacgcacgcagcacctggcgctgggtcgccgccgacgaccgcctctgggcacccaaggcttatttgatgagagctggggctgtcattcatagccatgggatggaaacttgcattgcaaccatgcttaatactggtgcaaaagagtttagggtgaacctacttgtttcttttccccatgaatcttag |
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| Protein seq | MGRVMELLDARSTWRWVAADDRLWAPKAYLMRAGAVIHSHGMETCIATMLNTGAKEFRVNLLVSFPHES |
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| Function | Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [UniProtKB/Swiss-Prot:C6JS30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_07g0028660 | OsKeNa_07g0028660.01 | Chr07 | 30129532 | 30131537 | - | NAM | ||
| CDS seq | atggggcgggtgatggagctcctggacgcacgcagcacctggcgctgggtcgccgccgacgaccgcctctgggcacccaaggcttatttgatgagagctggggctgtcattcatagccatgggatggaaacttgcattgcaaccatgcttaatactggtgcaaaagagtttagggtgaacctacttgtttcttttccccatgaatcttag
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| Protein seq | MGRVMELLDARSTWRWVAADDRLWAPKAYLMRAGAVIHSHGMETCIATMLNTGAKEFRVNLLVSFPHES |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0170800 | SBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g15110 | RBH | 0.853630 | 1.365460 | 0.791956 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0170800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0009270 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0021440 | RBH | 0.117676 | 2.537631 | 0.810170 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0009260 | RBH | 1.962644 | 0.654834 | 3.362742 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009000 | RBH | 0.166261 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0011180 | SBH | 5.343542 | 10.388365 | 7.838413 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0452600 | SBH | 2.681549 | 8.7126255 | 10.021394 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0028310 | SBH | 0.714241 | 0.297424 | 1.174972 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0453800 | SBH | 0.39923 | 0.7801145 | 1.153886 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0004380 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0010950 | RBH | 0.072267 | 3.094784 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010810 | SBH | 2.295839 | 5.925587 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0013380 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0004360 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G009190 | RBH | 0.840996 | 1.138615 | 1.111821 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0028460 | SBH | 1.720015 | 7.748922 | 1.562386 |
