Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_07g0008140 OGI:01011670 | 3/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr07:7227306-7234951
Gene Symbol -
DNA seq

tgtaccccggctagtcctggacggggattttaatgcacattctgcttgaaattcttttcgggaatttctgggcgtgacagtcaccttgtttggacaagtctatacatgcatggtagagcagtgtgtggcggtgtgtcctggaagaggcagcatctttgtcattcctgaagctctcaaggttgctgccagatccttctctggcactaatactccatcttcttagaatgtacttatctgggatgcttctgcagcctatgtgtgtcattacctacatgaacaatgaaaaacggaaatgataaactaaactgcttatacatcaaaactaattttttttagggtaactatggttttctacagatgtatacactggattaaagctgacagaatatgaatcgaatcaagaattaacttatcaacatataggcttacccaaatttatggtagatgggtaaaacaatttaagaagaaagaggcatgctctagaggtaaaaaaatgtaagtacaaggaccaaaataaagctggcgtaccttgataacgtggcaacacagtatgcccatgtgctcaaacaacttgcaaacacatttgtaatcttcttcatctttgtctacctgaactttgaatgacaacttagtccatgattctctcgcctcactgtcagcatgcacaagaacatatgtgccgtcgtcttcaatcttttcaatgatgtatgaactgctcatgtatacctggtcactgaacttctcaaacatagcatttgtgtatatgttcgcagccttcttttctagaggagaaccagaccgtggatgcctggtgtcctgtagttaagaaagcatgatttagaaaatgcataagaaaaaaaattgtgtactcaatatattgaatattatggcattggataatatcttacgcggtttgtctcaaactctgctttgtcctctgctgcaatcctgtcgttgataaacttgtcgtactggagcacaaagttgtgcatggtggaagtcgctgaaacataggttttgaggacgtggttcatactctcgcttcgctgtgtcgtggacatcttagcaaagaaaagctccctaaagtacggtgacgcccaatgttttcgatcatcaaatatcttctggaggaaggtattctcttgtaggctgtactcatcaattaatgctgaccatgcgctctcaaactcctcaaaagtggttgtatggttcagtacagcatggaacttctccttaaagcttgatctcttgctgtacaacttgcaacccaagctgtctttcgccttgcgaagaatgtgccacttgcaccacctgtgtgccgactctggacatacttctctaatggcattttccattgctcttgactggtctgctcaagaagacgtcaaatatttaacaagattcatagtaaaacatgttttttcataataagatgtgatatatgatgggcaataatggacaaacctgtgagaattccaactggtttcttcccattcatagcctggatgaaagttcggaacagccacttgtaagcttcatctgtttcttctctgattagtgcacatccgaaaatcacagtttggaaatgattgtttactcccacgaaaggagcaaacggcatcccatataaatttgtttgatatgtggagtcaaacgtcactacatcaccgaagtactcgtagctaagtctagaccatgcatgggaccagaaaatattcttgatcttaccatcagtaccgacatcaacggaatagaaaaaattcttacttgacctctgcatatctgcaaagaactggagtgtctttttgacatcgtcagtactttcttcagaacgaatagcttgcttcacattgttgaagtatgttcgcgtgaaaggcaacaccgacgcgccgccgtgcagtccagcaatgtacccatacatctgtgttgtagcaacgttgttttccattaaacccttcattatgcaccttgtagactcatcgatgtggttgtgtgagttccagtgacgagcttggttcgggttgagaggatggttatggtcgtcatcaactttagtcacgatccactgaccagatctcctcatgtggactcgtgcacaggctttgcatcccagcttaactgatttctgcacgccttttgaaggcttaccctgcaatccaaggatgaatttcatagacacagacaatatttagggtgcgaaaagttgccaaaattgacacttaggagtgtataacatacctggcatgaacatgcaaactcgacagaggtgacgctgccatctgcgtggtatacatgctttttaactctaatgccaaatccctttctgtaagcatgtatgttgtacgcctgttttgcgtctagttctgtttggaagaccttgccttcgacaaagtgaaggatctccgggttgtagtactccgccgggatgacattgttcacgtcagtgtgttcaacacggacgtccatactgatgacaggtagcgctgaaaaagagaatccgaacatattctcatcagtgcccaatcccaaccaaagtatagtgaataaattattaaaaaaaaggatgaaatgatgaacaaggaataaatgacgaacctgtagggtaactgattgcaagcagaagcagagtgaacggcagaagaggagcatgttaattgaaaggctggtgtatatataggtacgctaaccacaaatgaataggcggcaaaattgaaagcgattcattccatgtataaaaactcaatttaaggagtcattaatagctgagaaccggataagctatatatgtatattgaaacgcaatcactaaaatcactcttgtaataaaatggccattcattgtcaaatcgataaacctaattactctattgatttagtgacatgtaccacgtagagaatggaataatcgtgcgtgaggcgttacgtctcagatggttaaaactgataagtatgcaatttggattattcatttccattagatgataaaaaatatgaacaacagaaatattcatcccaaatttcacttcaaatagggatatacactaattttagttttggataaaacactacgtacacagtggacgcgaccactcatgatcccgagcatagttcacattttttatgtataaaaaaatcgggcatacacgcgtaccgtgtacatgtgagagttaacttgttcgaaatggatatcggtcacgaaattaacctgtacggaaaaattagtgaggcgaacgggaaccaccgggcgcgtgttcgcaccagtccactacctacacgtacacgcctttcaggttcacatatacctcaacttattatataaaaaaaccaggcatagacgcgtaccatgtacatgtgagaattaacatgatcgaaatggacatcgttcgcgaaattaacgtgtacgaaaagattagagaggtgaacggatgacggctgacgtgtttcctccccagtcaactacctataggtacacgccactcaggtactcgtgtacacgtatatatacacgaccgcccactcgtgtacacgtatatatacacgaccgcgtaggtataagttaatttatcctttgaacataacaattatatttaaatttgatcacgaaccctaataatggtgagcagcctaaattaatttttggataagacgctatttttttttgaaaaaacgcaacatatgtagtggccgtgtacgcgacccttatacctgtacttattgtcccacgtgatcccgagcatagtaccatttttttttaaatataaaaaaccaggcatacacgcgtaccatgtacatgtgagaattaacttgatcgaaatggatatcggtcgtgaaattaacatgtacgaaatgattggcgaggcgaacggactccaccggacgtgtgtcttccctagtccactacgtgagaattgacctattcgaaagagatatcggtcgcgaaattaacttgtacacaaagaatagtgaggcgaccggccttgaccggatgaatgttcgtaccagtccactccctatacgtaaatgcctgtcgggtggcataaccaaataatttttggatagaatcaccaaagtacattctggcagagagtacaccccattaaaaagaagaccggttgacataggcagcattgcagaattgaaaataattaaacttgtccaacaggtatggagacaataatataaattaatatatgtatcaaagtattaatactcatgtaatccaaagtaaaaagtaacaacccaaatagttcttgcataataaatgagttattatgttatttcacacaaataaaggatttaaaaaaaatatcttgcgcttcattgcgagacagcactgttgtattgcttcattagttggctgacgacatccgggagtgtggccgtattagccttcattgccatgatatccatcacaatgtctgctctgatattgttaatggattcctgtgattcataaagcaatttattgttaacaagatgagtataatgtacttgaaaaccatatgtgaaaagtgcacaacatataataagtacttaggaataattaccggattgagacctccgacacatttgaagccattccagttcttcatgtacaccagagtgttgaacccactatcagccctgcgtgagagttgtttatatatccattaggcattaatcaaatataggtatattctatattaaaattcatgtatgttttttcatacccgaaatgcatcggaggaacattgggttcagtttgttcccacttggtgacatcgtcggtccagtcgtggaagaacatagacaaacactcctgcattgctttcgctagtatggggccattccattgatgattattttcagcatggatatcattgccacgaacagactttttgggatcaaggatctgaaccaccctttcccgcagtttaaatgtatagcatttccaatggctcatttcacacattggaacaaaaatctgtggtttaattttgtcagcttatgtatttttatataaaagggttcaaattttcttactgacagaatatttacaataaatgttactcactattgcgcatttggagacatcatacttgacagattccccaatgaattgctcacggaagaaattagggttccaccactcattgcctgctatagcagctaactgcatatatatgaaattcattccatgggttaggtattagacatgtatatggatgtaagcgtgtgtattatcaaagactgaaatagtgtactgacagagaaatcaggctcgataaagtggcgccatccatatgcgggtgtgttaccgaactgttcaaattcaacctctagcattctcctaatataaataacacatgaacaatgatcgaggctttcattccgtctaagaatggcacgaacttgagctccagtcagtgtttggtgcgggtgtgttctatttgaaacccacacttgactgcattgtcaccatcataatgcatgtcaaaatttataaccaagcaggatgagtaaaaaaaattatgacaaataatgagaagacatacttcaggtgtgatggatcctggtagcttctgatccagttaagtaaaacattgcgtacacctccagagctagttttcatttcatcgggcatgagatcaaatggtgatgctgttgccatcttccaactttgtctgccataatttccgtcaaactgcaagactcttggcgctggtagctctctcttcttacagtgttccagcttaatcttacccttactgttctcaatataaatttcttgtaaatggtctaggcttgcagccgccacatcttgagaaatggaacgcggtgaaacaggagtatctggcaaatcacaaccagccatggaaaaaaaaaggaacaataagggtacttactatgtgaaacatgaaaatcaggcagcaaacatatacgtgtaggaaaataacctgtgttatttgatggtgagtagtcaatatttagatcaaatgatggaggatcgaagtccagatcagtataagtcctgtgtggaacagtgcgattcaagtcgattgattcttctttcaagttgtgagtatgaaccatcggtgtacaattggcagcagctgcactcacatcttctacatcatttcctaaagatggtgtttggttgacctctattccattctcagcatcatcgttgacagttgtgcatgtataacctttagaaacatcaacttcatcgctgattggtatggtcacgctgggcatgttcttcgaagcttctgtcaccttaactagactctctgttgccttatcaaggttgccaatgcaggaaatccaaaaacttttcaattcttgggccttctgtattaattcagcagcatgctgtgttgcatgttgatattaaaagtttatatctctagatatttactaaataaacatgtttggtagaaatttttttaataacttacctgagactcaatctgaacattttcatttcccccgctgtcagtgacagatgttctttcgcacgttcttttgtagcagacttcatttttgggccgtagctggatcgatataaagtgcaagtatatcagacatgtgaagggttagaacaatataaactatgaattatttttttgtaaagtacctttaattttccaaactgtgttgcctggtaatagttcctttcgctgatgtccagctgatatctttcctttattgtatcacgatcatataatgcaattcgaggaaatatattatgctccaagtttagatcacctccaaagtccacgttatccaaataatggacctttgcatgaaaaattttattagtgtactcactatcattatataattataacatttagtgtatgtactgcattgggaaaaagtctatatacctgcaaataaatagagcaaccagtgatataaccacatttagtgccatcagcgtgcttcttttgaacagttgccgctgcatccaatatctcgttcaacacatacccagaccaattgaactttgctatttcattggggtcaagtagtgcagaaaaatatcttggacatttattgtccatatttgattgtggcgcaagaaatttcatcataacaagcattaggaatgctgttttgaaactttctttctcagcctttgacatttgccctctgtggtgtttatctaatacatcctccaatacctccttgttaacgtcctcaaaactagcaactttcattctttcagcaattaacctcttgacatgagaaacaacctcaacattgggtgcttgcagctcctcccctacgcaaggaatcccaagcaccttcttaacatcctcaggagaaagtggcaaaacctcaccactttctagttcgatagccgaacgtgttggggatacccgtgacaaaagccagtagctgaagtcacgatggtttgttatgaggggcatatgcagcagcccctcaaaacccatctcagctaccagctctttcttttcagcactaaatctctgtatgataggtgtgatggaagatggtacacaacgcgaaaccggtgccacgaatttaacacgaacaaccttcttccttgtaggtggagtgacaaagtcatcatcatcatgaatggaacgacgcttcacatttcttctcacgctcgcacactttggaagccgcggcat

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CDS seq

atgccgcggcttccaaagtgtgcgagcgtgagaagaaatgtgaagcgtcgttccattcatgatgatgatgactttgtcactccacctacaaggaagaaggttgttcgtgttaaattcgtggcaccggtttcgcgttgtgtaccatcttccatcacacctatcatacagagatttagtgctgaaaagaaagagctggtagctgagatgggttttgaggggctgctgcatatgcccctcataacaaaccatcgtgacttcagctactggcttttgtcacgggtatccccaacacgttcggctatcgaactagaaagtggtgaggttttgccactttctcctgaggatgttaagaaggtgcttgggattccttgcgtaggggaggagctgcaagcacccaatgttgaggttgtttctcatgtcaagaggttaattgctgaaagaatgaaagttgctagttttgaggacgttaacaaggaggtattggaggatgtattagataaacaccacagagggcaaatgtcaaaggctgagaaagaaagtttcaaaacagcattcctaatgcttgttatgatgaaatttcttgcgccacaatcaaatatggacaataaatgtccaagatatttttctgcactacttgaccccaatgaaatagcaaagttcaattggtctgggtatgtgttgaacgagatattggatgcagcggcaactgttcaaaagaagcacgctgatggcactaaatgtggttatatcactggttgctctatttatttgcaggtccattatttggataacgtggactttggaggtgatctaaacttggagcataatatatttcctcgaattgcattatatgatcgtgatacaataaaggaaagatatcagctggacatcagcgaaaggaactattaccaggcaacacagtttggaaaattaaagctacggcccaaaaatgaagtctgctacaaaagaacgtgcgaaagaacatctgtcactgacagcgggggaaatgaaaatgttcagattgagtctcagcatgctgctgaattaatacagaaggcccaagaattgaaaagtttttggatttcctgcattggcaaccttgataaggcaacagagagtctagttaaggtgacagaagcttcgaagaacatgcccagcgtgaccataccaatcagcgatgaagttgatgtttctaaaggttatacatgcacaactgtcaacgatgatgctgagaatggaatagaggtcaaccaaacaccatctttaggaaatgatgtagaagatgtgagtgcagctgctgccaattgtacaccgatggttcatactcacaacttgaaagaagaatcaatcgacttgaatcgcactgttccacacaggacttatactgatctggacttcgatcctccatcatttgatctaaatattgactactcaccatcaaataacacaggttattttcctacacgtatatgtttgctgcctgattttcatatccttgatcccaaaaagtctgttcgtggcaatgatatccatgctgaaaataatcatcaatggaatggccccatactagcgaaagcaatgcaggagtgtttgtctatgttcttccacgactggaccgacgatgtcaccaaggctgatagtgggttcaacactctggtgtacatgaagaactggaatggcttcaaatgtgtcggaggtctcaatccggtagacaaagatgaagaagattacaaatgtgtttgcaagttgtttgagcacatgggcatactgtgttgccacgttatcaaggtaatgacacacataggctgcagaagcatcccagataagtacattctaagaagatggagtattagtgccagagaaggatctggcagcaaccttgagagcttcaggaatgacaaagatgctgcctcttccaggacacaccgccacacactgctctaccatgcatgtatagacttgtccaaacaaggtgactgtcacgcccagaaattcccgaaaagaatttcaagcagaatgtgcattaaaatccccgtccaggactag

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Protein seq

MPRLPKCASVRRNVKRRSIHDDDDFVTPPTRKKVVRVKFVAPVSRCVPSSITPIIQRFSAEKKELVAEMGFEGLLHMPLITNHRDFSYWLLSRVSPTRSAIELESGEVLPLSPEDVKKVLGIPCVGEELQAPNVEVVSHVKRLIAERMKVASFEDVNKEVLEDVLDKHHRGQMSKAEKESFKTAFLMLVMMKFLAPQSNMDNKCPRYFSALLDPNEIAKFNWSGYVLNEILDAAATVQKKHADGTKCGYITGCSIYLQVHYLDNVDFGGDLNLEHNIFPRIALYDRDTIKERYQLDISERNYYQATQFGKLKLRPKNEVCYKRTCERTSVTDSGGNENVQIESQHAAELIQKAQELKSFWISCIGNLDKATESLVKVTEASKNMPSVTIPISDEVDVSKGYTCTTVNDDAENGIEVNQTPSLGNDVEDVSAAAANCTPMVHTHNLKEESIDLNRTVPHRTYTDLDFDPPSFDLNIDYSPSNNTGYFPTRICLLPDFHILDPKKSVRGNDIHAENNHQWNGPILAKAMQECLSMFFHDWTDDVTKADSGFNTLVYMKNWNGFKCVGGLNPVDKDEEDYKCVCKLFEHMGILCCHVIKVMTHIGCRSIPDKYILRRWSISAREGSGSNLESFRNDKDAASSRTHRHTLLYHACIDLSKQGDCHAQKFPKRISSRMCIKIPVQD

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_07g0008140 OsKeNa_07g0008140.01 Chr07 7227306 7234951 - NAM
CDS seq

atgccgcggcttccaaagtgtgcgagcgtgagaagaaatgtgaagcgtcgttccattcatgatgatgatgactttgtcactccacctacaaggaagaaggttgttcgtgttaaattcgtggcaccggtttcgcgttgtgtaccatcttccatcacacctatcatacagagatttagtgctgaaaagaaagagctggtagctgagatgggttttgaggggctgctgcatatgcccctcataacaaaccatcgtgacttcagctactggcttttgtcacgggtatccccaacacgttcggctatcgaactagaaagtggtgaggttttgccactttctcctgaggatgttaagaaggtgcttgggattccttgcgtaggggaggagctgcaagcacccaatgttgaggttgtttctcatgtcaagaggttaattgctgaaagaatgaaagttgctagttttgaggacgttaacaaggaggtattggaggatgtattagataaacaccacagagggcaaatgtcaaaggctgagaaagaaagtttcaaaacagcattcctaatgcttgttatgatgaaatttcttgcgccacaatcaaatatggacaataaatgtccaagatatttttctgcactacttgaccccaatgaaatagcaaagttcaattggtctgggtatgtgttgaacgagatattggatgcagcggcaactgttcaaaagaagcacgctgatggcactaaatgtggttatatcactggttgctctatttatttgcaggtccattatttggataacgtggactttggaggtgatctaaacttggagcataatatatttcctcgaattgcattatatgatcgtgatacaataaaggaaagatatcagctggacatcagcgaaaggaactattaccaggcaacacagtttggaaaattaaagctacggcccaaaaatgaagtctgctacaaaagaacgtgcgaaagaacatctgtcactgacagcgggggaaatgaaaatgttcagattgagtctcagcatgctgctgaattaatacagaaggcccaagaattgaaaagtttttggatttcctgcattggcaaccttgataaggcaacagagagtctagttaaggtgacagaagcttcgaagaacatgcccagcgtgaccataccaatcagcgatgaagttgatgtttctaaaggttatacatgcacaactgtcaacgatgatgctgagaatggaatagaggtcaaccaaacaccatctttaggaaatgatgtagaagatgtgagtgcagctgctgccaattgtacaccgatggttcatactcacaacttgaaagaagaatcaatcgacttgaatcgcactgttccacacaggacttatactgatctggacttcgatcctccatcatttgatctaaatattgactactcaccatcaaataacacaggttattttcctacacgtatatgtttgctgcctgattttcatatccttgatcccaaaaagtctgttcgtggcaatgatatccatgctgaaaataatcatcaatggaatggccccatactagcgaaagcaatgcaggagtgtttgtctatgttcttccacgactggaccgacgatgtcaccaaggctgatagtgggttcaacactctggtgtacatgaagaactggaatggcttcaaatgtgtcggaggtctcaatccggtagacaaagatgaagaagattacaaatgtgtttgcaagttgtttgagcacatgggcatactgtgttgccacgttatcaaggtaatgacacacataggctgcagaagcatcccagataagtacattctaagaagatggagtattagtgccagagaaggatctggcagcaaccttgagagcttcaggaatgacaaagatgctgcctcttccaggacacaccgccacacactgctctaccatgcatgtatagacttgtccaaacaaggtgactgtcacgcccagaaattcccgaaaagaatttcaagcagaatgtgcattaaaatccccgtccaggactag

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Protein seq

MPRLPKCASVRRNVKRRSIHDDDDFVTPPTRKKVVRVKFVAPVSRCVPSSITPIIQRFSAEKKELVAEMGFEGLLHMPLITNHRDFSYWLLSRVSPTRSAIELESGEVLPLSPEDVKKVLGIPCVGEELQAPNVEVVSHVKRLIAERMKVASFEDVNKEVLEDVLDKHHRGQMSKAEKESFKTAFLMLVMMKFLAPQSNMDNKCPRYFSALLDPNEIAKFNWSGYVLNEILDAAATVQKKHADGTKCGYITGCSIYLQVHYLDNVDFGGDLNLEHNIFPRIALYDRDTIKERYQLDISERNYYQATQFGKLKLRPKNEVCYKRTCERTSVTDSGGNENVQIESQHAAELIQKAQELKSFWISCIGNLDKATESLVKVTEASKNMPSVTIPISDEVDVSKGYTCTTVNDDAENGIEVNQTPSLGNDVEDVSAAAANCTPMVHTHNLKEESIDLNRTVPHRTYTDLDFDPPSFDLNIDYSPSNNTGYFPTRICLLPDFHILDPKKSVRGNDIHAENNHQWNGPILAKAMQECLSMFFHDWTDDVTKADSGFNTLVYMKNWNGFKCVGGLNPVDKDEEDYKCVCKLFEHMGILCCHVIKVMTHIGCRSIPDKYILRRWSISAREGSGSNLESFRNDKDAASSRTHRHTLLYHACIDLSKQGDCHAQKFPKRISSRMCIKIPVQD

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0141500 SBH 0.093649 0.135214 0.915561
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g12990 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0141500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0016040 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0010050 SBH 0.0 0.0 3.303881
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0015860 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0015910 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0121500 SBH 0.005146 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0016390 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0057900 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0015660 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0022080 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0015830 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0016080 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0007980 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G022210 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0007860 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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