Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_07g0010050 OGI:07029510 | 4/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr07:10565737-10566322
Gene Symbol -
DNA seq

aaagcacttgtttagggtttcatcgggtactcaaatttctgttcaacaattacaagtgcatttgaaggaggtaacacggataacaagttcatcacagcttttatgttgattactctgtgcaagatcattgccccaacaacatcaaaccaacctagtatgcaatatgccaatgtttgcttggatgttaacaacattgcaaagtacaattgggctgaggacatgctttcaactataagaaatgcagtgctgcaggtgcaggacaagattgagaagaaagaaaatattgattggatttcagcatccacatattttcttggggtacatatctacatgcttaatctctcctttacgccttctttttagtactgtaacatctcactgcttctttcccctaaaaatgcagctactatatttagattatatagatgcatctggatgtaatgtgccatggggagagcctagggtggcattttggacagatcaagcagcaaaaccattgaaaaatgctgatatgggatctgggctttatgcagtttatggatcatgcaaggtaattcgaccactccttcaatgtcatctcatctaa

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CDS seq

atgttgattactctgtgcaagatcattgccccaacaacatcaaaccaacctagtatgcaatatgccaatgtttgcttggatgttaacaacattgcaaagtacaattgggctgaggacatgctttcaactataagaaatgcagtgctgcaggtgcaggacaagattgagaagaaagaaaatattgattggatttcagcatccacatattttcttgggctactatatttagattatatagatgcatctggatgtaatgtgccatggggagagcctagggtggcattttggacagatcaagcagcaaaaccattgaaaaatgctgatatgggatctgggctttatgcagtttatggatcatgcaaggtaattcgaccactccttcaatgtcatctcatctaa

Protein seq

MLITLCKIIAPTTSNQPSMQYANVCLDVNNIAKYNWAEDMLSTIRNAVLQVQDKIEKKENIDWISASTYFLGLLYLDYIDASGCNVPWGEPRVAFWTDQAAKPLKNADMGSGLYAVYGSCKVIRPLLQCHLI

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_07g0010050 OsCMeo_07g0010050.01 Chr07 10565737 10566322 + NAM
CDS seq

atgttgattactctgtgcaagatcattgccccaacaacatcaaaccaacctagtatgcaatatgccaatgtttgcttggatgttaacaacattgcaaagtacaattgggctgaggacatgctttcaactataagaaatgcagtgctgcaggtgcaggacaagattgagaagaaagaaaatattgattggatttcagcatccacatattttcttgggctactatatttagattatatagatgcatctggatgtaatgtgccatggggagagcctagggtggcattttggacagatcaagcagcaaaaccattgaaaaatgctgatatgggatctgggctttatgcagtttatggatcatgcaaggtaattcgaccactccttcaatgtcatctcatctaa

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Protein seq

MLITLCKIIAPTTSNQPSMQYANVCLDVNNIAKYNWAEDMLSTIRNAVLQVQDKIEKKENIDWISASTYFLGLLYLDYIDASGCNVPWGEPRVAFWTDQAAKPLKNADMGSGLYAVYGSCKVIRPLLQCHLI

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 3.303881

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g17260 RBH 0.164472 0.261597 0.119422
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0017730 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0008240 SBH 0.137021 1.265301 0.278596
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0017490 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0008020 SBH 7.699109 16.277096 6.997818
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0008510 SBH 0.717370 0.300457 0.382679
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0008000 SBH 0.303114 0.130553 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0008000 SBH 1.519894 13.962718 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0008000 SBH 26.788910 22.687967 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0017750 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0017530 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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