Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0022830 | OGI:04056480 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:19445531-19451760 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agagcaacacttctttttttggaacaatatgcacaactgccgtgcaaaattatagccgcagacaaattaaagccagtggagcagttttcagctcttttggtgcaaggggctttgtatacatacataacttaaaacataagatgtagctatgcctgcaactatgaactcaggcattcagccacctctcgcacccgaaatagcaaagaatcacggcactgaatttgtaattcgaaggctcaactaaaggccctggctgtggctggggtccagcatccaagtccacctaaacaaatgttgctcttctacatacctctatgtggtagtgaatggttagtcatcgccgccaccatcatcagcctccacgggatcatcatcatacccttcatcctcttggtcgccagcatcgtcgacatccatgagttcttgccctacaactgcttcgtttattgcttccaatgcttgcacagtcctcagctccggaggagctctctccactttcatggttttcagcttatcatccacaaagaatgcggtgaatggcttcggaacctacaaggtgctcatagttagattcattcaagtgtttacttcctatgctttgaacaaaaggaaaaggtggcagcaatcaaacctggaaatagcgaccccgctcttttgcactctcaacaaggttgttccagtgtttatcttccttcaatgttgaagcagaacctacaacctgtggtatgacaagtattatttggattgataactaaaccaacaaagttaactacataagcaaatagtgatatagccagaaacaactgattgaccagatatccagtctatgatttacttttactagcccctgtgcaatggatggaatccaagaaagttacatattgcacagctcaccaatctcagaaagggactttacattatgaacgtaagataaaacctcacatgacagaacaaaaattgcagcagccaccttgaactagcatgctgagcagtactgtatgagagagatgctccttgctttgtacacacttcactaggatgcaaaactctccattattgagtaaaaacacgcctctgtactcatatgagtgcatatccgctgtgtattatgcaaaagacggtactgcttgactgcaaatcatgcagaaattggtatgacatgtaaggattggagtttgcatagattacttactagtacagcagacctagctcttgtgatggcgacattcattcgtcgaaaatcagaaacgaacccaatcttttgttccttattgcaccgaacacatgagaaaatgactacttccttttcacacccctatatgtgagcatcaagaacaaacattacaaaagttataatcactgtgatttgctacaaatctacatatacagcaggtctgcatttgcatgcaaaacaaacctggaatccatcaactgtatttacgtctatcacttccttagactgatcaccgaaggtcgaccgaaaatggtccttcaagagcttcacctgatgcctgtatggtgatatgacagctacctgggaactagatttgagttctggatagcgcatagccatttgatgatataagagggttatgaattccacttcatcctcattcacccatgaaccacttccagatggttgggactcagtcccatccacatcaaagaagcagaatgggccgaaacagctgtaggaatgccatggacgtttcttgctgagtccctccccgtcttctaggacaccttcgtagaattctttcgaggggaatatactaatctgttttttagtggattaataaaataagaaaacgactccagtctccatcttttaaatgaatttaggcaatattacctctgggtgcatgcgatactgaattttgagcatttgcacaggaaaacctgcagcctgaaatctcttgaacaaactagtaccgtacctaatggatacattagtattatttagaatgttgtaaaaccttacatccagagtatgtatagaacagagagagagagagatcttaccctaacttctgagcagtagatgaaattacagttgcaggcaactgaactgggtcaccaacctgacaaaatattaacagaaatagttagatatgagatcacaatcagctcagatgaaagcttcatgtatcagggtatctagagaaacagtgtgtgcagacgcactgagaaatgaaaacacatggtcagagaatcaaatctaagctagtgaaagatctctgtgtactccagcaaaataaatttaaaagtgccatgcccatgtatgatttctttgctgagcgaattaacaaggtattataatgacaaaatggtaaggcataaagataaggctcatagttgaagagaagggcaacataaatcgtagataggtggatgtcatacaagaaaaacttgtttgcacccatggatcaagggtataagagttgctggttctacctgaaaaaagaaggggatatgccaaacttcagaatttcaacataacagaaagtcagaaactcataaaataccattatctaaatctgagagtggctaaatgctccatcgtgtaacaatctgtataaagcaaacactcacagcttgtgcagcttcatcaattataacaacatcaaaagcacgagccatcctgctgaaaatggatgatccactaaaacttagcgtagaaaacacctacaaattttgcttgacagtcagaatcaaatattaaatgattcctggaatactgaaataagcaaaagaatgtgaaataagaaaatgaatgtacgatggctgcttcatcaagaatggaagatctaattcgatcatattcaccagcccctcgtctcccaccatctgatgagcgatccacaccagaaagtttttgttgtatctgcaaagatatcaacttatcaactcactgtaattgagttggacagaaaatacttagcaactaaaatcacgtacaaggtaatccatggaaactgctttaacagagtgatgcgccttcagtccaattcgcacaatcttaggattataggtgttgttattttcatcgcgtattcctgaaaggaagaagaataataatttagatgattgattttccgatcaataaattagtgaccagatgagcctaagaaatgttgtttagtttgtagcacatggatgcaattgaaagagtatttttattgtcagaacatttttctgaattggatcagtcagcacagaaacccctttacctgtttgcagaactcgcagcacaatctcatcaagtgctgagttggatggagcacagaccaagacatgggcccgatacttgcgattggaacttacgacctcaggtttctatcaagacaggtgtttaccatgtaacaaaaatacaaaattcatacaggcatcatggcaaatatagcaaagtacagagcacagaagcttactagctcattcccagtaggataaaaaccatcatcgccgtcaacaggcataattaaatctcgaggatttacaccaatcagccacggggaggccttcatccagtgtgcatgcctatcacatgagctctgcagtaagatagtgcaacagatatttgcagcagtattatgtagcaaataaaggaactgcataattccacagagtaagaaaagaaaaaaatacactgaaaagaatttctttatcagttcccatactacatataaaatccacatgctgagtgatcactaaatatgatagtacaaatgtaaaaatagctacaatcttctccctctaacaaacactaagagaagtaccataaagtaaggtgaatttgttatttccaaacaccatagagaacttgtttaaaggaggaaaaaagcaagcagaagaaatggacaaaacaagaaaattagctgaggatgaagcaattgaaaagagtccaattcattaacatacttgccctcaatatcaagctctggaccgtgttttttaacatcaaaaccacctctgcatgacaagaacgtaaatcatgtcagatacatgtagcttttggaaactgtattgaacacttatatttatgttttagcttctaatatctctttttttatatatcaaggtttctcctctccataacagaaagatactagtctacatttcactcagtaataaatatacacaggtgaagatattacttggtttgcattcttgcaggagcagaatggagaacagcactgaggagtccaaggatagtttgtgtttttcctgttcctgggggcccctacaaatatacattggagttctatatgaatggcatgtgacaacaagtagagcacatgtagctgcatatactctagttctcaaggcactagcatttctctaaaataggttaatgataaataatactgaaaaataaacaaatataactggaaataagcaaacaaacctggataagaacaaaggatctgcgagaaagacctgcctgcaagagataatgcattgatcaatcagacatctgatttttcttagaactaaattgagcaacaaaaaaggatattaagaataatgctcacgttgactgcatctagttgtgaatcattaaggtttgttttaagataatccataagtggctcagggacattccaagcacggttttgatcattcccaccactgttcttctcactagctgaaagaatcagatccttaaaaggaagtgatgctacagagtgcatgcccgagaattctcgcattatggtagacaagctgcaaatctgacaattttaaccataaaagaaaatagcatattcatatgtgttgtcaatgaattatgcaagcatgaaaactcaggcattctttattagcagttgaaactcacctttaaaatccagaggaagctctctgtagttgaaaaaatggaagcaatacgctgcagcctagaacagctcacaggctttgctacattaagattttttatttcacctgccacaaatgtccttagagaaatcgtttctctgccaccccgctgttccactaaggcaaaggcatatgcactgggggtcactccctcttcaaactacaaaagtgcagatatatatcaatgtgatgaattttcaatcataacttctttcttgaagagatatcgcatagaatcgatggagcattttgctagcctggcatattatctaaaaccatggaaagcactttttctggtgaaattatgtctcaagttccccatagcccttccaaatgtaggagcgcagataagtaactaacattgtcttgagttcttgacacgctatatgttccactaaattctgtagccatctataccttttgaaacatttcctatcacaccactaaggtgctaaagcacttactttctctttggacagcagcaggagatcgttctccgacaccatctcccggaaatcatcaagcacggccatggacaccttgtggaacccctccgactcggtgcacgacgccacaatccccttctgccagttctgcccagcctctgcccacacagaaacgcaagggagagaaaaacaacacacacacacacacacactgttaaataaaccgacagcaaattgggggggcaacacgaaatcgggcgcgccacccacccacccaccttcctcctcgtcgctgcgcccctggacgatctgcgccttcacctcctcgaacagcagcggctcgaacacagcgaggtactcggccaccgaggcgtacgtgttcttcacgcgccccagccccttcgcctgctgctgcccgccctgtcctcccaagccgccatatagaaaaaaaattcaaaggtggtgccggtgattgcaaagcgagcgctcggggcggggcggggaggggcgtaccttggagtccgcgacgaggcggacgtagtcccagctgaggacgatcttgtggaagcggtccatggtggaggcggcgacgcccgacgaggaggaggaggcgccgcctccgcctccgccgccgccggatttgtccaccgccattggggcggcggcgcggcggcgcggcggcgagagaagggggttctggggtttagtgagccgccggcgctgcagcggcaaacagcctcgctctggaaagaaggaaaaggaacgagatgagagcaaacagagagaaagtgcgatgctaatggttatggccatgtaatgggcctgagcccatttctgaagtacccccaacgaacatggggcaactccgatgcaaatccacaaacgaaagtttgatgaaatggggcttcaatt
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| CDS seq | atggccataaccattagcatcgcactttctctctgtttgctctcatctcgttccttttccttctttccagagcgaggctgtttgccgctgcagcgccggcggctcactaaaccccagaacccccttctctcgccgccgcgccgccgcgccgccgccccaatggcggtggacaaatccggcggcggcggaggcggaggcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagagaaatttgaagagggagtgacccccagtgcatatgcctttgccttagtggaacagcggggtggcagagaaacgatttctctaaggacatttgtggcaggtgaaataaaaaatcttaatgtagcaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaaaggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagatttaattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttatacaacaaaaactttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgaatatgatcgaattagatcttccattcttgatgaagcagccatctattccaggaatcatttaatatttgattctgactgtcaagcaaaatttgtaggtgttttctacgctaatggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgtagaaccagcaactcttatacccttgatccatgggtgcaaacaagttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcatgcacccagagattagtatattcccctcgaaagaattctacgaaggtgtcctagaagacggggagggactcagcaagaaacgtccatggcattcctacagctgtttcggcccattctgcttctttgatgtggatgggactgagtcccaaccatctggaagtggttcatgggtgaatgaggatgaagtggaattcataaccctcttatatcatcaaatggctatgcgctatccagaactcaaatctagttcccaggtagctgtcatatcaccatacaggcatcaggtgaagctcttgaaggaccattttcggtcgaccttcggtgatcagtctaaggaagtgatagacgtaaatacagttgatggattccaggggtgtgaaaaggaagtagtcattttctcatgtgttcggtgcaataaggaacaaaagattgggttcgtttctgattttcgacgaatgaatgtcgccatcacaagagctaggtctgctgtactagttgtaggttctgcttcaacattgaaggaagataaacactggaacaaccttgttgagagtgcaaaagagcggggtcgctatttccaggttccgaagccattcaccgcattctttgtggatgataagctgaaaaccatgaaagtggagagagctcctccggagctgaggactgtgcaagcattggaagcaataaacgaagcagttgtagggcaagaactcatggatgtcgacgatgctggcgaccaagaggatgaagggtatgatgatgatcccgtggaggctgatgatggtggcggcgatgac
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| Protein seq | MAITISIALSLCLLSSRSFSFFPERGCLPLQRRRLTKPQNPLLSPPRRRAAAPMAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKEKFEEGVTPSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIYSRNHLIFDSDCQAKFVGVFYANGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD |
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| Function | Probable helicase MAGATAMA 3 [UniProtKB/Swiss-Prot:B6SFA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0022830 | OsKeNa_03g0022830.02 | Chr03 | 19445551 | 19451760 | - | NAM | ||
| CDS seq | atggccataaccattagcatcgcactttctctctgtttgctctcatctcgttccttttccttctttccagagcgaggctgtttgccgctgcagcgccggcggctcactaaaccccagaacccccttctctcgccgccgcgccgccgcgccgccgccccaatggcggtggacaaatccggcggcggcggaggcggaggcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagagaaatttgaagagggagtgacccccagtgcatatgcctttgccttagtggaacagcggggtggcagagaaacgatttctctaaggacatttgtggcaggtgaaataaaaaatcttaatgtagcaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaaaggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagatttaattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttatacaacaaaaactttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgaatatgatcgaattagatcttccattcttgatgaagcagccatctattccaggaatcatttaatatttgattctgactgtcaagcaaaatttgtaggtgttttctacgctaatggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgtagaaccagcaactcttatacccttgatccatgggtgcaaacaagttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcatgcacccagagattagtatattcccctcgaaagaattctacgaaggtgtcctagaagacggggagggactcagcaagaaacgtccatggcattcctacagctgtttcggcccattctgcttctttgatgtggatgggactgagtcccaaccatctggaagtggttcatgggtgaatgaggatgaagtggaattcataaccctcttatatcatcaaatggctatgcgctatccagaactcaaatctagttcccaggtagctgtcatatcaccatacaggcatcaggtgaagctcttgaaggaccattttcggtcgaccttcggtgatcagtctaaggaagtgatagacgtaaatacagttgatggattccaggggtgtgaaaaggaagtagtcattttctcatgtgttcggtgcaataaggaacaaaagattgggttcgtttctgattttcgacgaatgaatgtcgccatcacaagagctaggtctgctgtactagttgtaggttctgcttcaacattgaaggaagataaacactggaacaaccttgttgagagtgcaaaagagcggggtcgctatttccaggttccgaagccattcaccgcattctttgtggatgataagctgaaaaccatgaaagtggagagagctcctccggagctgaggactgtgcaagcattggaagcaataaacgaagcagttgtagggcaagaactcatggatgtcgacgatgctggcgaccaagaggatgaagggtatgatgatgatcccgtggaggctgatgatggtggcggcgatgac
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| Protein seq | MAITISIALSLCLLSSRSFSFFPERGCLPLQRRRLTKPQNPLLSPPRRRAAAPMAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKEKFEEGVTPSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIYSRNHLIFDSDCQAKFVGVFYANGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0022830 | OsKeNa_03g0022830.01 | Chr03 | 19445531 | 19451760 | - | NAM | ||
| CDS seq | atggccataaccattagcatcgcactttctctctgtttgctctcatctcgttccttttccttctttccagagcgaggctgtttgccgctgcagcgccggcggctcactaaaccccagaacccccttctctcgccgccgcgccgccgcgccgccgccccaatggcggtggacaaatccggcggcggcggaggcggaggcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagagaaatttgaagagggagtgacccccagtgcatatgcctttgccttagtggaacagcggggtggcagagaaacgatttctctaaggacatttgtggcaggtgaaataaaaaatcttaatgtagcaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaaaggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagatttaattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttatacaacaaaaactttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgaatatgatcgaattagatcttccattcttgatgaagcagccatcgtgttttctacgctaagttttagtggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcatgcacccagagattagtatattcccctcgaaagaattctacgaaggtgtcctagaagacggggagggactcagcaagaaacgtccatggcattcctacagctgtttcggcccattctgcttctttgatgtggatgggactgagtcccaaccatctggaagtggttcatgggtgaatgaggatgaagtggaattcataaccctcttatatcatcaaatggctatgcgctatccagaactcaaatctagttcccaggtagctgtcatatcaccatacaggcatcaggtgaagctcttgaaggaccattttcggtcgaccttcggtgatcagtctaaggaagtgatagacgtaaatacagttgatggattccaggggtgtgaaaaggaagtagtcattttctcatgtgttcggtgcaataaggaacaaaagattgggttcgtttctgattttcgacgaatgaatgtcgccatcacaagagctaggtctgctgtactagttgtaggttctgcttcaacattgaaggaagataaacactggaacaaccttgttgagagtgcaaaagagcggggtcgctatttccaggttccgaagccattcaccgcattctttgtggatgataagctgaaaaccatgaaagtggagagagctcctccggagctgaggactgtgcaagcattggaagcaataaacgaagcagttgtagggcaagaactcatggatgtcgacgatgctggcgaccaagaggatgaagggtatgatgatgatcccgtggaggctgatgatggtggcggcgatgac
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| Protein seq | MAITISIALSLCLLSSRSFSFFPERGCLPLQRRRLTKPQNPLLSPPRRRAAAPMAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKEKFEEGVTPSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 19448215 | 19448310 | - | OsKeNa_03g0022830.02 | OsKeNa_03g0022830.01,OsKeNa_03g0022830.02 | All |
| SE | Chr03 | 19447611 | 19448123 | - | OsKeNa_03g0022830.02 | OsKeNa_03g0022830.01,OsKeNa_03g0022830.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.524717 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0440200 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g32526 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0440200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024830 | SBH | 0.914187 | 2.322480 | 3.583814 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0012730 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0022890 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0022870 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0013000 | SBH | 7.044560 | 6.624845 | 14.328947 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0285700 | RBH | 1.1768615 | 4.6091755 | 7.6980755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009330 | RBH | 0.000000 | 0.000000 | 0.191948 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0257700 | SBH | 13.671044 | 22.8194065 | 35.8946475 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024500 | SBH | 0.245970 | 0.089568 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0012920 | SBH | 0.460051 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0012680 | SBH | 0.000000 | 4.648478 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010070 | RBH | 0.000000 | 0.127729 | 0.416761 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0012740 | SBH | 0.062311 | 6.101510 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G012900 | SBH | 0.000000 | 0.666938 | 0.141891 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0012870 | SBH | 0.481578 | 4.377009 | 1.649101 |
