Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_03g0022870 | OGI:04056480 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr03:19648915-19655252 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggaacaatatgcacaactgccgtgcaaaattatagccgcagacaaattaaagccagtggagcagttttcagctcttttggtgcaaggggctttgtatacatacataacttaaaacataagatgtagctatgcctgcaactatgaactcaggcattcagccacctctcgcacccgaaatagcaaagaatcacggcactgaattgtaattcgaaggctcaactaaaggccctggctgtggctggggtccagcatccaagtccacctaaacaaatgttgctcttctacatacctctatgtggtagtgaatggttagtcatcgccgccaccatcatcagcctccacgggatcatcatcatacccttcatcctcttggtcgccagcatcgtcgacatccatgagttcttgccctacaactgcttcgtttattgcttccaatgcttgcacagtcctcagctccggaggagctctctccactttcatggtttcagcttatcatccacaaagaatgcgtgtgaatggcttcggaacctacaaggtgctcatagttagattcattcaagtgtttacttcctatgctttgaacaaaaggaaaaggtggcagcaatcaaacctggaaatagcgaccccgctcttttgcactctcaacaaggttgttccagtgtttatcttccttcaatgttgaagcagaacctacaacctgtggtatgacaagtattatttggattgataactaaaccaacaaagttaactacataagcaaatagtgatatagccagaaacaactgattgaccagatatccagtctatgatttacttttactacccctgtgcaatggatggaatccaagaaagttacatattgcacagcctacaacctgtggtatgacaagtattatttggattgataactaaccaacaaagtaactacataagtccaaatagtggatagccagaaacaactgattgaccagatatccagtctatgatttacttttactagcccctgtgcaatggatgaatccaagaaagttacatattgcacagctcaccaattctcagaaagggactttacattatgaacgtaagataaaacctcacatgacagaacaaaaattgcagcagccaccttgaactagcatgctgagagcagtactgtatgagagagatgctccttgctttgtacacacttcactaggatgcaaactctccatcttgaggaaaacaacgcctctgtactcatatgagtgcatatccgctgtgtattatgcaaaagacggtactgcttgactgcaaatcatgcagaaattggtatgacatgtaaggattggagtttgcatagattacttactagtacagcagacctagctcttgtgatggcgacattcattcgtcgaaaatcagaaaacgaacccatcttttgttcctgattgcaccgaacacatgagaaaaatgactacttccttttcacacccctatatgtgagcatcaagaacaaacattacaaaagttataatcactgtgaTttTGCTACAAATCTACATATACAGCAGGTCTGCATTTGCATGCAAAACAAACCTGGAATCCATCAACTGTATTTACGTCTATCACTTCCTTAGACTGATCACCGAAGGTCGACCGAAAATGGTCCTTCAAGAGCTTCACCTGATGCCTGTATGGTGATATGACATGATATGACAGCTACCTGGGAACTAGATTTGAGTTCTGGATAGCGCATAGCCATTTGATGATATAAGAGGGTTATGAATTCCACTTCATCCTCATTCACCCATGAACCACTTCCAGATGGTTGGGACTCAGTCCCATCCACATCAAAGAAGCAGAATGGGCCGAAACAGCTGTAGGAATGCCATGGACGTTTCTTGCTGAGTCCCTCCCCGTCTTCTAGGACACCTTCGTAGAATTCTTTCGAGGGGAATATACTAATCTGTTTTTTAGTGGATTAATAAAATAAGAAAACGACTCCAGTCTCCATCTTTTAAATGAATTTAGGCAATATTACCTCTGGGTGCATTgcgatactgaattttgagcatttgcacaggaaaacctgcagcctgaaatctcttgaacaaactagtaccgtacctaatggatacattagtattatttagaatgttgtaaaaccttacatccagagtatgtatagaacagagagagagagagatcttaccctaacttctgagcagtagatgaaattacagttgcaggcaactgaactgggtcaccaacctgacaaaatattaacagaaatagttagatatgagatcacaatcagctcagatgaaagcttcatgtatcagggtatctagagaaacagtgtgtgcagacgcactgagAaatgaaaacacatggtcagagaatcaaatctaagctagtgaaagatctctgtgtactccagcaaaataaatttaaaagtgccatgcccatgtatgatttctttgctgagcgaattaacaaggtattataatgacaaaatggtaaggcataaagataaggctcatagttgaagagaagggcaaCataaatcgtagataggtggatgtcatacaagaaaaacttgtttgcacccatggatcaagggtataagagttgctggttctacctgaaaaaagaaggggatatgccaaacttcagaatttcaacataacagaaagtcagaaactcataaaataccattatctaaatctgagagtggctaaatgctccatcgtgtaacaatctgtataaagcaaacactcacagcttgtgcagcttcatcaattataacaacatcaaaagcacgagccatcctgctgaaaatggatgatccactaaaacttagcgtagtagaaaacacctacaaattttgcttgacagtcagaatcaaatattaaatgattcctggaatactgaaataagcaaaagaatgtgaaataagaaaatgaatgtacgatggctgcttcatcaagaatggaagatctaattcgatcatattcaccagcccctcgtctcccaccatctgatgagcgatccacaccagaagtttttgttgtatctgcaaagatatcaacttatcaactcactgtaattgagttggacagaaatacttagcaactaaaatcacgtacaaggtaatccatggaaactgctttaacagagtgatgcgccttcagtccaattcgcacaatcttaggattataggtgttgttattttcatcgcgtattcctgaaaggaagaagaataataatttagatgattgattttccgatcaataaattagtgaccagatgagcctaagaaatgttgtttagtttgtagcacatggatgcaattgaaagagtatttttattgtcagaactttttctgaattggatcagtcagcacagaaacccctttacctgtttgcagaactcgcagcacaatctcatcaagtgctgagttggatggagcacagaccaagacatgggcccgatacttgcgattggaacttacgacctcaggtttctatcaagacaggtgtttaccatgtaacaaaaatacaaaattcatacaggcatcatggcaaatatagcaaagtacagagcacagaagcttactagctcattcccagtaggataaaaaccatcatcgccgtcaacaggcataataaaatctcgaggatttacaccaatcagccacggggaggccttcatccagtgtgcatgcctatcacatgagctctgcagtaagatagtgcaacagattttgcagcagtattatgtagcaaaaaaggaactgcataattccacagagtaagaaaagaaaaaaatacactgaaaagaatttctttatcagttcccatactacataaaatccacatgctgagtgatcactaaatatgatagtacaaatgtaaaaatagctacaatcttctccctctaacaaacactaagagaagtaccataaagtaaggtgaatttgttatttccaaacaccatagagaacttgtttaaaggaggaaaaaagcaagcagaagaaatggacaaaacaagaaaattagctgaggatgaagcaattgaaaagagtccaattcattaacatacttgccctcaatatcaagctctggaccgtgttttttaacatcaaaaccacctctgcatgacaagaacgtaaatcatgtcagatacatgtagcttttggaaactgtattgaacactatatttatgttttagcttctaatatctctttttttatatatcaaggtttctcctctccataacagaaagatactagtctacatttcactcagtaataaatatacacaggtgaagatattacttggtttgcattcttgcaggagcagaatggagaacagcactgaggagtccaaggatagtttgtgttttcctgttcctgggggcccctacaaatatacattggagttctatatgaatggcatgtgacaacaagtagagcacatgtagctgcatatactctagttctcaaggcactagcatttctctaaaataggttaatgataaataatactgaaaaataaacaaatataactggaaataagcaaacaaacctggataagaacaaaggatctgcgagaaagacctgcctgcaagagataatgcattgatcaatcagacatctgatttttcttagaactaaattgagcaacaaaaaaggatattaagaataatgctcacgttgactgcatctagttgtgaatcattaaggtttgttttaagataatccataagtggctcagggacattccaagcacggttttgatcattcccaccactgttcttctcactagctgaaagaatcagatccttaaaaggaagtgatgctacagagtgcatgcccgagaattctcgcattatggtagacaagctgcaaatctgacaattttaaccataaaagaaaatagcatattcatatgtgttgtcaatgaattatgcaagcatgaaaactcaggcattctttattagcagttgaaactcacctttaaaatccagaggaagctctctgtagttgaaaaaatggaagcaatacgctgcagcctagaacagctcacaggctttgctacattaagattttttatttcacctgccacaaatgtccttagagaaatcgtttctctgccaccccgctgttccactaaggcaaggcatatgcactgggggtcactccctcttcaaactacaaaagtgcagatatatatcaatgtgatgaattttcaatcataacttctttcttgaagagatatcgcatagaatcgatggagcattttgctagcctggcatattatctaaaaccatggaaagcacttttctggtgaaattatgtctcaagttccccatagcccttccaaatgtaggagcgcagataagtaactaacattgtcttgagttcttgacacgctatatgttccactaaattctgtagccatctataccttttgaaacatttcctatcacaccactaaggtgctaaagcacttactttctttggacagcagcaggagatcgttctccgacaccatctcccggaaatcatcaagcacggccatggacaccttgtggaacccctccgactcggtgcacgacgccacaatccccttctgccagttctgcccagcctctgcccAcacagaaacgcaagggagagaaaaacaacacacacacacacacacacacacactgttaaataaaccgacagcaaattgggggggcaacacgaaatcgggcgcgccacccacccacccaccttcctcctcgtcgctgcgcccctggacgatctgcgccttcacctcctcgaacagcagcggctcgaacacagcgaggtactcggccaccgaggcgtacgtgttcttcacgcgccccagccccttcgcctgctgctgcccgccctgtcctcccaagccgccatatagaaaaaaattcaaaggtggtgccggtgattgcaaagcgagcgctcGgggcggggcggggaggggcgtaccttggagtccgcgacgaggcggacgtagtcccagctgaggacgatcttgtggaagcggtccatggtggaggcggcgacgcccgacgaggaggaggaggcgccgCctccgcctccgccgccgccggatttgtccaccgccattggggcggcggcgcggcggcgcggcggcgagagaagggggttctggggtttagtgagccgccggcgctgcagcggcaaacagcctcgctctggaaagaaggaaaaggaacgagatgagagcaaacagagagaaagtgcgatgctaatggttatggccatgtaatgggcctgagcccatttctgaagtacccccaacgaacat
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| CDS seq | atggcggtggacaaatccggcggcggcggaggcggagGcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagaaacaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaagtaatatcttcacctgtgtatatttattactgagtgaaataggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagattttattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttgtacatacaacaaaaacttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgaatatgatcgaattagatcttccattcttgatgaagcagccatcgtgttttctactacgctaagttttagtggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcAATGCACCCAGAGGTAATATTGCCTAA
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| Protein seq | MAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKETKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKHKLSLDSSVLFSILLLQECKPSNIFTCVYLLLSEIGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDFIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLVHTTKTSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTTLSFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRNAPRGNIA |
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| Function | Probable helicase MAGATAMA 3 [UniProtKB/Swiss-Prot:B6SFA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_03g0022870 | OsARC_03g0022870.01 | Chr03 | 19648915 | 19655252 | - | NAM | ||
| CDS seq | atggcggtggacaaatccggcggcggcggaggcggagGcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagaaacaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaagtaatatcttcacctgtgtatatttattactgagtgaaataggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagattttattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttgtacatacaacaaaaacttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgaatatgatcgaattagatcttccattcttgatgaagcagccatcgtgttttctactacgctaagttttagtggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcAATGCACCCAGAGGTAATATTGCCTAA
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| Protein seq | MAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKETKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKHKLSLDSSVLFSILLLQECKPSNIFTCVYLLLSEIGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDFIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLVHTTKTSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTTLSFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRNAPRGNIA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_03g0022870 | OsARC_03g0022870.04 | Chr03 | 19649224 | 19655142 | - | NAM | ||
| CDS seq | atgggttcgttttctgattttcgacgaatgaatgtcgccatcacaagagctaggtctgctgtactagttgtaggttctgcttcaacattgaaggaagataaacactggaacaaccttgttgagagtgcaaaagagcggggtcgctatttccagagagctcctccggagctgaggactgtgcaagcattggaagcaataaacgaagcagttgtagggcaagaactcatggatgtcgacgatgctggcgaccaagaggatgaagggtatgatgatgatcccgtggaggctgatgatggtggcggcgatgactaa
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| Protein seq | MGSFSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQRAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_03g0022870 | OsARC_03g0022870.03 | Chr03 | 19648915 | 19655252 | - | NAM | ||
| CDS seq | atggcggtggacaaatccggcggcggcggaggcggagGcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagaaacaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccagagctcatgtgataggcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagattttattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttatacaacaaaaacttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgttttctactacgctaagttttagtggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcAATGCACCCAGAGGTAATATTGCCTAA
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| Protein seq | MAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKETKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSSCDRHAHWMKASPWLIGVNPRDFIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLLVWIAHQMVGDEGLVFSTTLSFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRNAPRGNIA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_03g0022870 | OsARC_03g0022870.02 | Chr03 | 19648915 | 19655252 | - | NAM | ||
| CDS seq | atggcggtggacaaatccggcggcggcggaggcggagGcggcgcctcctcctcctcgtcgggcgtcgccgcctccaccatggaccgcttccacaagatcgtcctcagctgggactacgtccgcctcgtcgcggactccaagggcgggcagcagcaggcgaaggggctggggcgcgtgaagaacacgtacgcctcggtggccgagtacctcgctgtgttcgagccgctgctgttcgaggaggtgaaggcgcagatcgtccaggggcgcagcgacgaggaggaagaggctgggcagaactggcagaaggggattgtggcgtcgtgcaccgagtcggaggggttccacaaggtgtccatggccgtgcttgatgatttccgggagatggtgtcggagaacgatctcctgctgctgtccaaagaaacaaagcctgtgagctgttctaggctgcagcgtattgcttccattttttcaactacagagagcttcctctggattttaaagatttgcagcttgtctaccataatgcgagaattctcgggcatgcactctgtagcatcacttccttttaaggatctgattctttcagctagtgagaagaacagtggtgggaatgatcaaaaccgtgcttggaatgtccctgagccacttatggattatcttaaaacaaaccttaatgattcacaactagatgcagtcaacgcaggtctttctcgcagatcctttgttcttatccaggggcccccaggaacaggaaaacacaaactatccttggactcctcagtgctgttctccattctgctcctgcaagaatgcaaaccaagtaatatcttcacctgtgtatatttattactgagtgaaataggtggttttgatgttaaaaaacacggtccagagcttgatattgagggcaagcatgcacactggatgaaggcctccccgtggctgattggtgtaaatcctcgagattttattatgcctgttgacggcgatgatggtttttatcctactgggaatgagctaaaacctgaggtcgtaagttccaatcgcaagtatcgggcccatgtcttggtctgtgctccatccaactcagcacttgatgagattgtgctgcgagttctgcaaacaggaatacgcgatgaaaataacaacacctataatcctaagattgtgcgaattggactgaaggcgcatcactctgttaaagcagtttccatggattaccttatacaacaaaaacttctggtgtggatcgctcatcagatggtgggagacgaggggctggtgttttctactacgctaagttttagtggatcatccattttcagcaggatggctcgtgcttttgatgttgttataattgatgaagctgcacaagctgttggtgacccagttcagttgcctgcaactgtaatttcatctactgctcagaagttagggtacggtactagtttgttcaagagatttcaggctgcaggttttcctgtgcaaatgctcaaaattcagtatcgcAATGCACCCAGAGGTAATATTGCCTAA
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| Protein seq | MAVDKSGGGGGGGGASSSSSGVAASTMDRFHKIVLSWDYVRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKETKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKHKLSLDSSVLFSILLLQECKPSNIFTCVYLLLSEIGGFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDFIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLLVWIAHQMVGDEGLVFSTTLSFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRNAPRGNIA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 19649382 | 19649525 | - | OsARC_03g0022870.01,OsARC_03g0022870.02,OsARC_03g0022870.03 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.03,OsARC_03g0022870.04 | All |
| A3 | Chr03 | 19651164 | 19651676 | - | OsARC_03g0022870.04 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.03,OsARC_03g0022870.04 | All |
| A3 | Chr03 | 19653991 | 19654412 | - | OsARC_03g0022870.04 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.03,OsARC_03g0022870.04 | All |
| RI | Chr03 | 19651676 | 19651969 | - | OsARC_03g0022870.04 | OsARC_03g0022870.02,OsARC_03g0022870.03,OsARC_03g0022870.04 | All |
| RI | Chr03 | 19651676 | 19651969 | - | OsARC_03g0022870.04 | OsARC_03g0022870.01,OsARC_03g0022870.04 | All |
| A5 | Chr03 | 19651771 | 19651913 | - | OsARC_03g0022870.01 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.03 | All |
| A5 | Chr03 | 19651969 | 19652043 | - | OsARC_03g0022870.01 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.03,OsARC_03g0022870.04 | All |
| A5 | Chr03 | 19653048 | 19653233 | - | OsARC_03g0022870.01,OsARC_03g0022870.02 | OsARC_03g0022870.02,OsARC_03g0022870.01,OsARC_03g0022870.04 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0440200 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g32526 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0440200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024830 | SBH | 0.914187 | 2.322480 | 3.583814 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0022830 | RBH | 0.000000 | 0.000000 | 0.524717 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0022890 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0012870 | SBH | 0.181844 | 0.089163 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0012960 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0332300 | SBH | 0.4444425 | 2.645657 | 4.764658 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0012790 | SBH | 0.050311 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0188500 | SBH | 8.55332 | 32.627218 | 30.659929 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024500 | SBH | 0.245970 | 0.089568 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0013040 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013050 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0013620 | SBH | 0.000000 | 0.119044 | 0.061800 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0012710 | SBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G024360 | SBH | 0.307656 | 4.022513 | 1.847464 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0024320 | SBH | 0.944071 | 8.952902 | 5.530948 |
