Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_04g0008370 | OGI:04051520 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr04:16330024-16332093 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAACCGATGTTTCGTATGCTCTTGATCACATCATCATAAGAAAATACTGCTAAATCTTTCCGATACAAGAGAACGAGGGAAGGCATGAAAATACAAGATTAGCGCACCCTAGTTTAAGTACTAGCGTCCCACCCCAACATTCTTGTAGTTAAAAAGCCTCTCCCAGCTGCTTGCTGCTCACCTCGCCATTCGTGGCTTATGTAGTGGTGGGCATTCCTACGTGCTCCGAGTGATCCCCACAGGAGATTATATGAGAAGATTTATACGTGCTCCGACTGATTGCCTCAGCCTTTTAGAAGGGCATTTGGTGCAAGGGTAGTCACCAATAGTATTGTGGCATATTCCTCGACAAATGCCTGTTATACTACACTAGTCCGCATCTGTAACCACACACATTGAGAGCGAAGAGATGTCCTCATCACACCGTATTGAGGAGTCTTAGCTTCAAGATGTCATTACAGACATTATAGACCTTACTGACCTATTCACGAAAGGATGGTCCAACAATTTGGATGCAGAAGGTCTATCATCCGGATTTCGTCTCAAACACTGGCTTATGAAATCACGAGCCTCCTTTGAAAGGTATTTTGGGATTGCTGGTGGTTCACCCCTTCCAATCTTAAACAAAGCTTGTGCCTGCAAAACAACAATTGAAGAAATAGTTGGACACATTTAATTGAACAAGAATTGAAGGAATAATTCAAGGGAATTGGATCATAGTGAACACATTTAATTTATCGAATTTTGACAAATAATTTAATTCTACAGTGGAAAACAATTTTCCTGATGAAGAATAACTCACCCATTCTAAATTTGGGTAAGGCAGTTGACGTGTCAACATCTCCAGGACTGTGCAACCCAGACTCCATATATCAGCTGCCGTTCCATATGTCCTCTTGGGATTGACAACCTGAATGTTCAATGTATAGATTTAAGCTGAATTAAGCGACGTACTACTACTAAATTTCAGTACATGAGAACAAAACTCTACCATTGCCATCATAGACAGTTTTTACTATTTGATATATCATATAATACTAGCTAGCCAGTTCTTAGCGTTTATTAACATTAAATTGTTGGATATATCCATGGCCACATTGTGCCAGCTGACTTTCACTTTCACCCAAGTCCACAATGTATATGTGCCGCTCATTTTTAGGATAATATTTCAGTACTTTTTTTTCTGGACAAAAACATTGAAGGAGGGGGAGAAAGCTATGGTGACAAAAAATCTTAGCATGTCCATTTTGTTATTTCTTTTTTTTTAAGAAAAAACTCATCGATCATGCATGGTGGTATACCTCGGGTGCCATCCAATAAACACTTCCTTCGCATGATTTAAGCATGCTGAATTTGTTTATCTGAAAGAGATAACTAATAAATCAAGAGTAGAACAAAGTCAATAACAAAGAACTGAAAGATCTAACACAAACATAAATACAGAGTTTGCAAGGCAGAAAGCAGAGACCTCCTTAGCAAGACCAAAGTCGGCAAGTTTCACAGATCCATTCCTATGCACCAGTATATTGCCACACTTCACATCCCTACAAGAATTTTGAATATTGAAGTACATGAGTATATAATTAATATTTTTTCCTGCGCAAGACAAATTGAGAAATCTAGTGAGCAATTTAGAATTAAGAAATCCCATTTATGTTACAAAATTACAGGTTGAAATTGCCTATGGTGTAAATAGACGTATGAATATTACCGATGAACAATGTTTCTGTCGTGGAGGTAAATCAACCCATTAAGAATTTGTTTTGTATATCGCGAAACATGAGAATTTCGCAGGCGATATTTCTGGTACAAGGATGCAAGAGAGCCTTGTGACATTAGTTCTAGGAAGACGTAAAGCTTTGAGTCCTCCTGCAGTTTTCACACAATGGATGATCATATTAACCTTAAAAGAAACATGTATAAGAAAACCTATGAATTTATATACAACACAATAGCACACATTACTTCGACAAATAGTTAGATGAAGAACCACAAGATCCTGTAAAAACAAAGATCACAAGATCGATCAGGAACTTACTTTGTCTGTACCATAGTACTGTACAATGTTAT
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| CDS seq | ATGCTTAAATCATGCGAAGGAAGTGTTTATTGGATGGCACCCGAGGTTGTCAATCCCAAGAGGACATATGGAACGGCAGCTGATATATGGAGTCTGGGTTGCACAGTCCTGGAGATGTTGACACGTCAACTGCCTTACCCAAATTTAGAATGGGCACAAGCTTTGTTTAAGATTGGAAGGGGTGAACCACCAGCAATCCCAAAATACCTTTCAAAGGAGGCTCGTGATTTCATAAGCCAGTGTTTGAGACGAAATCCGGATGATAGACCTTCTGCATCCAAATTGTTGGACCATCCTTTCGTGAATAGGTCAGTAAGGTCTATAATGTCTGTAATGACATCTTGA |
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| Protein seq | MLKSCEGSVYWMAPEVVNPKRTYGTAADIWSLGCTVLEMLTRQLPYPNLEWAQALFKIGRGEPPAIPKYLSKEARDFISQCLRRNPDDRPSASKLLDHPFVNRSVRSIMSVMTS |
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| Function | Mitogen-activated protein kinase kinase kinase 1 [UniProtKB/Swiss-Prot:Q39008] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_04g0008370 | OsKYG_04g0008370.01 | Chr04 | 16330024 | 16332093 | - | NAM | ||
| CDS seq | ATGCTTAAATCATGCGAAGGAAGTGTTTATTGGATGGCACCCGAGGTTGTCAATCCCAAGAGGACATATGGAACGGCAGCTGATATATGGAGTCTGGGTTGCACAGTCCTGGAGATGTTGACACGTCAACTGCCTTACCCAAATTTAGAATGGGCACAAGCTTTGTTTAAGATTGGAAGGGGTGAACCACCAGCAATCCCAAAATACCTTTCAAAGGAGGCTCGTGATTTCATAAGCCAGTGTTTGAGACGAAATCCGGATGATAGACCTTCTGCATCCAAATTGTTGGACCATCCTTTCGTGAATAGGTCAGTAAGGTCTATAATGTCTGTAATGACATCTTGA
More
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| Protein seq | MLKSCEGSVYWMAPEVVNPKRTYGTAADIWSLGCTVLEMLTRQLPYPNLEWAQALFKIGRGEPPAIPKYLSKEARDFISQCLRRNPDDRPSASKLLDHPFVNRSVRSIMSVMTS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0339800 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g15570 | SBH | 1.953127 | 1.580384 | 1.233908 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0339800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0008730 | RBH | 0.000000 | 0.000000 | 1.289039 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0009380 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0009160 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0008820 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0008980 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0253300 | RBH | 0.150011 | 2.3715675 | 0.3389285 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0008120 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0249700 | RBH | 0.7989055 | 5.6074675 | 2.4663665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0008530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0008430 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0008750 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0009060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0011300 | SBH | 1.190235 | 21.003841 | 6.375943 |
