Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsKYG_03g0012060		OGI:03023930 \| 15/16			KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)			Chr03:9230539-9233943		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GGTATAACAGCCCCCTTAATAGTTTTAATTTCAACACAAGCAAATCTGATTCCAAAGTCCGCTGGCGGGTGTACTCGTTCATTTGTTACTGCCCCCATTTCCAATATAATACAACAGTGAACCGAATGTACACGTACAACAATGTTGACTATAGTTGATTGTAACTCTACAAATGATCGTTACTTGCTGTAAGCTCTGCCTTTTGTGTGTAGGCAGGTAAGGGGGGAAAATAATCGGTCATCCAAAATTACTGGATCGTTGCATATGTTTCTTGTTTCATTTTCATTAAGTTGCTCTCTATGCCTCTTAACACAGGTCTATATCTGCATAAGTGATGGCAACAGTTAAATTTCACCAAACAGAGGGGAAAATAAAATGCAGAATCGGACAAACAATAATAGTATACTTACAGGCGTGCGAGGTTATTCTGCGCTTGCACCGCTTTTCTGAGTTCAGCTGAAAGTTTCATTATTTCTGCCGACAACCCCTCGGATCTGCTCTGTTCTTTGATGAGCTGATCCTGTAGACAATGAAATATGCAGTTGTAAACCAATGACATGACAATAAATAGATTTGACTAGTCATGGTATAGACAAGAAAATATTCTCGACAGCTCCAGCAATCAACCTTTAGGGAGAGATTCTCAGTTACAAACTCTGGCGGGAATGAAATGCTGGTCTCGTTCTGCCCATCTGGCTGGATAGTGGTATTACTTGTTTTCAATAGAGTAGCTTGCTCAAGTCTTAACTTCTCTAAGTGAGAGCGTAGCTCTTCATTTTGCTTGAGACAATCTTTTACCTGGAAATTGTGATTAATTGAACACGCAAGATGCTGGTATCATCCATAAATGATAAATGTTTGTCTCTCCATGCATGAAATGACTGATAACAGCACACCTGGTTTTCCCATTGCATTGTAACAGCTACAGCTTCTTGGTATGAAGTAGACAAGGCTGAGTTCTCCTCAAACAGCTTTTCTATTTCTGATGATTGAGAATCAATCTGTCAAACACAATCCAAAACTTAGCCAGCTCATTGGGAACTTATTTTGTTCAAAGAAAAGGAAGGCAGCATCAAACACCTCCATTAACAACTTTTGGCGGCTGCCCTCTAGCCTCTCAACCATCAAAGCCATATCATGCAATTGGCTTTCAAGTTTTTCCCTATCTTCCTGCATAATTAAAAAATGGCCAGTACAGTTTAAGATTGATTCGAGCCCAGCAAGAAGATTACGGCGAACACTTAGCATTACAAGTTTCTAATCACCCCTGAAAATTTTGAATTAAGACAAGGGCATTCAGGCTTACAGGTGTCCACCTAGCCTGTTGTAATGCAAGATCTCATCTCAGTTTTACTTTTGAGTCCTTGATAACTATGGACTAACACATGAAGTATTTACCTTGGCAAAATCTTAACTCATGGAAAAACAAAAAACTTGAAGTTTGTTCGATACATTACCATTGAAAATGCCTTGCGTGCAGCAAATTCAGAAGCTTCATCTGCATGGTAGGGGAAACTTATTTCATGCAGTTTACCAGTAAAATATGGAATATCTGAAGGAACGGAAAGCAGAGCAGCATGACAAATGTGGAAGTAAAAGACTATGCTGAATGGCACGTTTACTAGAGATAGAGTACCCTATATGAAGCTACAAAATATGTTTCATATGCACCTGATGCTTTCTTCGTCAAGGCAGCAATTTTTTCTTCCAACTCTTTCTTTTCCGCAACCAAGGAAGCAGCACGAGACTGTTCTCCAGTTAGCTTTTGTTGCTCTTGTTGCCTTAATAGGGACTCTTCAGAAAGTTTCTGTTGCTCCTGCTGCCTTAGCAATGATTCTTGCTGCATTAACCATTTTATATGTTAGTTTGCTTAGATAGAATAATCAATAATAAGGACAAGCAAAACACTGAAGCAAGACAAAATGACCTACCTTCAGCTGAGCCTGCAAATTTTCTACCTCCTTTTCCATAGCAAGAATGTGCTCATTTGATACACCAACTGGAAATCCAGTATAAGAGTTGCTCATTACTTGCTGCTGCAGGGTATTTAACTGTGCTCTCAATGATGCAGAGTCCTCTTCTGCCTGTAAATCATAAGATTAGCACACTAATGATATGACTAAGGATGCACAATTTTTCAAAATACCCTGTATTGCTCCTCTTCTGCCTCCTTCAGTCGTTTCTTCATGCTCCTTAGTTGTGCGAGAGCATCCTCCTACTTAGCATACCAGGTAGAAGTGATAATGGGGATTAGACATATCAGAATCGTGAATACCATAAACACGAAGACAGTCAAGTACCTTAGCAACAGCTGCGGCATCTTTCTCCAAAGAAATGTCATTCACAGCCTTTTTCAAGGAGGGTACTATATTCCGCTCCTGCAAACAGCGAATTAATCCCCAAAGTAAAACGCGTGCAAAATGTAAGCCATATGCATCAAACTGCAACACAAGTACCAAATTAAAATGCACAATATGAAACTCACAAGGTCGTTCAAGCGGTTAACGAGGGAATCCTTCTCGACTTCCTTCTCAGCAATCTAGACGAAGCTATGCTTTGTTAATACTACTTCATCCTTCAGGTAACTGTACCACAACAATACTGAACTGCAGAGAAAATACCTTGGATAACAGCATTTGGTTTTCCCTCTCCAATGCTATGTTCCCATTTTCAAGTTCTCTAACTCGACCAAGAAGCTACCATTCATACCAAAAGCCTTAGTTATAGTCTAGAAACAACATGAGAATTTGGATACGTACTTGCCACGATCAATGTTCATCCGAACTATTCGACACAAAGGAAAGGGGGGCAAACCTCAGCTCCGGCTCCTGGGTTCCCTACAGAAAACAATCGCCATTAAGCCCACAAGATTAGCACTGAACTACGAACTGTTCCAGGGGAAGAGAGGGATGGACCAACCGTAAGGGTCGACAAGGGACGCCGCGGCGGCCGGGTTGTGCTGCTGCTGCATCCTCTCGGCGGCTCTCTTCTGCCGGATCTCCTCCAGCTGCCAGACAAACGCGCACACAAACCCCAACACAAATTTGAGCCTCAAATCCCAGATACAAACGAGACGCGGATCTGAAACGCCTCGCGTCACAGAGAAGCAGGAGGGAGAGGAGAGGAGAGGCATACGGTGCGGCGCCCCCGCGAGGCGTGATTGGCTTCCATCTCCGGCGACCGGCCGACGAACCGGTCGGCTTTCTGGAAGCTCGGGATCCGGAGGCGCGACGCGAAGGAGGATGGCCGATGGCGGGGGCTCCTCCGGTATCGCCTCGATCCTGTGATGCCCGGAGAAGAGAAGGGGAAGAAACCCAAACTCGTGGGCCTAGCCAACGTGTTGGCCTTCTAGAGTTCACAAGCCGGCCCGTACGAGCCCGATCGGGCAGGTTATTCAGTACCCCC More
CDS seq		ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCGTGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA More
Protein seq		MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSRAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ
Function		-

Transcripts

sorry

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_03g0012060	OsKYG_03g0012060.04	Chr03	9230539	9233943	-	NAM
CDS seq	ATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCGTGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA More
Protein seq	MLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSRAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_03g0012060	OsKYG_03g0012060.03	Chr03	9230539	9233943	-	NAM
CDS seq	ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCGTGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA More
Protein seq	MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNPGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSRAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_03g0012060	OsKYG_03g0012060.02	Chr03	9230539	9233943	-	NAM
CDS seq	ATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGAGCCGGAGCTGAGCTTCTTGGTCGAGTTAGAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCGTGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA More
Protein seq	MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSRAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_03g0012060	OsKYG_03g0012060.01	Chr03	9230539	9233943	-	NAM
CDS seq	ATGAACATTGATCGTGGCAAAGAACTTGAAAATGGGAACATAGCATTGGAGAGGGAAAACCAAATGCTGTTATCCAAGATTGCTGAGAAGGAAGTCGAGAAGGATTCCCTCGTTAACCGCTTGAACGACCTTGAGCGGAATATAGTACCCTCCTTGAAAAAGGCTGTGAATGACATTTCTTTGGAGAAAGATGCCGCAGCTGTTGCTAAGGAGGATGCTCTCGCACAACTAAGGAGCATGAAGAAACGACTGAAGGAGGCAGAAGAGGAGCAATACAGGGCAGAAGAGGACTCTGCATCATTGAGAGCACAGTTAAATACCCTGCAGCAGCAAGTAATGAGCAACTCTTATACTGGATTTCCAGTTGGTGTATCAAATGAGCACATTCTTGCTATGGAAAAGGAGGTAGAAAATTTGCAGGCTCAGCTGAAGCAAGAATCATTGCTAAGGCAGCAGGAGCAACAGAAACTTTCTGAAGAGTCCCTATTAAGGCAACAAGAGCAACAAAAGCTAACTGGAGAACAGTCTCGTGCTGCTTCCTTGGTTGCGGAAAAGAAAGAGTTGGAAGAAAAAATTGCTGCCTTGACGAAGAAAGCATCAGATGAAGCTTCTGAATTTGCTGCACGCAAGGCATTTTCAATGGAAGATAGGGAAAAACTTGAAAGCCAATTGCATGATATGGCTTTGATGGTTGAGAGGCTAGAGGGCAGCCGCCAAAAGTTGTTAATGGAGATTGATTCTCAATCATCAGAAATAGAAAAGCTGTTTGAGGAGAACTCAGCCTTGTCTACTTCATACCAAGAAGCTGTAGCTGTTACAATGCAATGGGAAAACCAGGTAAAAGATTGTCTCAAGCAAAATGAAGAGCTACGCTCTCACTTAGAGAAGTTAAGACTTGAGCAAGCTACTCTATTGAAAACAAGTAATACCACTATCCAGCCAGATGGGCAGAACGAGACCAGCATTTCATTCCCGCCAGAGTTTGTAACTGAGAATCTCTCCCTAAAGGATCAGCTCATCAAAGAACAGAGCAGATCCGAGGGGTTGTCGGCAGAAATAATGAAACTTTCAGCTGAACTCAGAAAAGCGGTGCAAGCGCAGAATAACCTCGCACGCCTATATAGACCTGTGTTAAGAGGCATAGAGAGCAACTTAATGAAAATGAAACAAGAAACATATGCAACGATCCAGTAA More
Protein seq	MNIDRGKELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQVMSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQKLTGEQSRAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQSRSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_03g0012060	OsKYG_03g0012060.05	Chr03	9230626	9233821	-	IsoSeq
CDS seq	GATCGAGGCGATACCGGAGGAGCCCCCGCCATCGGCCATCCTCCTTCGCGTCGCGCCTCCGGATCCCGAGCTTCCAGAAAGCCGACCGGTTCGTCGGCCGGTCGCCGGAGATGGAAGCCAATCACGCCTCGCGGGGGCGCCGCACCCTGGAGGAGATCCGGCAGAAGAGAGCCGCCGAGAGGATGCAGCAGCAGCACAACCCGGCCGCCGCGGCGTCCCTTGTCGACCCTTACGGGAACCCAGGAGCCGGAGCTGAGGTTTGCCCCCCTTTCCTTTGTGTCGAATAGTTCGGATGAA More
Protein seq	DRGDTGGAPAIGHPPSRRASGSRASRKPTGSSAGRRRWKPITPRGGAAPWRRSGRREPPRGCSSSTTRPPRRPLSTLTGTQEPELRFAPLSFVSNSSDE

Event Type	Chromosome	Start	End	Strand	Alternative mRNAs	Total mRNAs	Source
A3	Chr03	9233366	9233458	-	OsKYG_03g0012060.01,OsKYG_03g0012060.03,OsKYG_03g0012060.05	OsKYG_03g0012060.01,OsKYG_03g0012060.05,OsKYG_03g0012060.02,OsKYG_03g0012060.03	All
A3	Chr03	9233217	9233298	-	OsKYG_03g0012060.05	OsKYG_03g0012060.01,OsKYG_03g0012060.05	All
RI	Chr03	9233353	9233545	-	OsKYG_03g0012060.04	OsKYG_03g0012060.03,OsKYG_03g0012060.04	All
RI	Chr03	9233353	9233545	-	OsKYG_03g0012060.04	OsKYG_03g0012060.04,OsKYG_03g0012060.02	All
A5	Chr03	9233234	9233353	-	OsKYG_03g0012060.05	OsKYG_03g0012060.03,OsKYG_03g0012060.04,OsKYG_03g0012060.02,OsKYG_03g0012060.05	All

Expression

	Leaf	Root	Panicle
FPKM	1.521585	1.589186	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_03g0268100	RBH	1.863191	3.299580	4.152690
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os03g16120	RBH	1.139460	2.070731	0.971619
Nipponbare \| IRGSP 1.0 \| RAP-db	Os03g0268100	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_03g0012280	RBH	0.987327	2.770998	9.213886
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_03g0012110	RBH	0.271310	2.510860	3.537359
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_03g0012130	RBH	1.326301	14.269515	8.897238
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_03g0012080	RBH	0.017639	0.442867	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_03g0011960	RBH	10.796139	1.816466	16.108459
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_03G0150400	RBH	5.3292135	11.9536435	24.6678675
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_03g0011860	RBH	0.265680	1.306938	1.411816
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_03G0151800	RBH	7.4919275	12.342806	15.7954365
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_03g0011990	RBH	0.449252	0.042357	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	NA	NA	NA	NA	NA
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_03g0012060	RBH	7.127318	19.021690	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_03g0012000	RBH	1.031113	1.717305	1.343534
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_03g0011940	RBH	0.310219	5.830701	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_03G011910	RBH	0.966715	7.029445	3.432235
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	NA	NA	NA	NA	NA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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